Experiment: perchlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_17480 and AO356_17485 are separated by 256 nucleotides AO356_17485 and AO356_17490 are separated by 5 nucleotides
AO356_17480: AO356_17480 - LPS export ABC transporter permease LptG, at 3,936,333 to 3,937,394
_17480
AO356_17485: AO356_17485 - elongation factor 4, at 3,937,651 to 3,939,450
_17485
AO356_17490: AO356_17490 - signal peptidase, at 3,939,456 to 3,940,310
_17490
Position (kb)
3937
3938
3939
3940 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3937.397 kb on + strand at 3937.397 kb on + strand at 3937.398 kb on - strand at 3937.483 kb on + strand at 3937.498 kb on + strand at 3937.499 kb on - strand at 3937.593 kb on + strand at 3937.593 kb on + strand at 3937.593 kb on + strand at 3937.846 kb on + strand, within AO356_17485 at 3937.846 kb on + strand, within AO356_17485 at 3937.846 kb on + strand, within AO356_17485 at 3937.846 kb on + strand, within AO356_17485 at 3937.846 kb on + strand, within AO356_17485 at 3937.870 kb on + strand, within AO356_17485 at 3937.915 kb on + strand, within AO356_17485 at 3937.915 kb on + strand, within AO356_17485 at 3937.915 kb on + strand, within AO356_17485 at 3938.266 kb on + strand, within AO356_17485 at 3938.266 kb on + strand, within AO356_17485 at 3938.545 kb on + strand, within AO356_17485 at 3938.635 kb on + strand, within AO356_17485 at 3938.635 kb on + strand, within AO356_17485 at 3938.635 kb on + strand, within AO356_17485 at 3938.635 kb on + strand, within AO356_17485 at 3938.986 kb on + strand, within AO356_17485 at 3939.052 kb on + strand, within AO356_17485 at 3939.175 kb on + strand, within AO356_17485 at 3939.175 kb on + strand, within AO356_17485 at 3939.175 kb on + strand, within AO356_17485 at 3939.276 kb on + strand at 3939.276 kb on + strand at 3939.276 kb on + strand at 3939.276 kb on + strand at 3939.276 kb on + strand at 3939.319 kb on + strand at 3939.444 kb on + strand at 3939.444 kb on + strand at 3939.444 kb on + strand at 3939.444 kb on + strand at 3939.448 kb on + strand at 3939.448 kb on + strand at 3939.455 kb on + strand at 3939.455 kb on + strand at 3939.455 kb on + strand at 3940.392 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 75 mM remove 3,937,397 + +0.6 3,937,397 + +0.0 3,937,398 - -0.4 3,937,483 + -0.7 3,937,498 + +1.2 3,937,499 - -0.8 3,937,593 + +0.2 3,937,593 + -0.1 3,937,593 + +0.5 3,937,846 + AO356_17485 0.11 -1.2 3,937,846 + AO356_17485 0.11 -0.9 3,937,846 + AO356_17485 0.11 -1.2 3,937,846 + AO356_17485 0.11 -0.6 3,937,846 + AO356_17485 0.11 -1.0 3,937,870 + AO356_17485 0.12 +0.6 3,937,915 + AO356_17485 0.15 -0.6 3,937,915 + AO356_17485 0.15 -1.6 3,937,915 + AO356_17485 0.15 -0.0 3,938,266 + AO356_17485 0.34 +0.6 3,938,266 + AO356_17485 0.34 +0.6 3,938,545 + AO356_17485 0.50 +1.5 3,938,635 + AO356_17485 0.55 -0.9 3,938,635 + AO356_17485 0.55 -0.5 3,938,635 + AO356_17485 0.55 +2.7 3,938,635 + AO356_17485 0.55 -0.9 3,938,986 + AO356_17485 0.74 +1.0 3,939,052 + AO356_17485 0.78 -0.9 3,939,175 + AO356_17485 0.85 +2.4 3,939,175 + AO356_17485 0.85 +1.1 3,939,175 + AO356_17485 0.85 -1.6 3,939,276 + -1.1 3,939,276 + -2.2 3,939,276 + -0.1 3,939,276 + +1.0 3,939,276 + -1.1 3,939,319 + +0.6 3,939,444 + -0.5 3,939,444 + +0.9 3,939,444 + -0.9 3,939,444 + +0.4 3,939,448 + -0.3 3,939,448 + +0.0 3,939,455 + -0.9 3,939,455 + +0.8 3,939,455 + -0.6 3,940,392 + -0.7
Or see this region's nucleotide sequence