Experiment: perchlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_16475 and AO356_16480 are separated by 1 nucleotides AO356_16480 and AO356_16485 are separated by 4 nucleotides AO356_16485 and AO356_16490 are separated by 172 nucleotides
AO356_16475: AO356_16475 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase, at 3,722,761 to 3,723,612
_16475
AO356_16480: AO356_16480 - outer membrane lipoprotein LolB, at 3,723,614 to 3,724,231
_16480
AO356_16485: AO356_16485 - hypothetical protein, at 3,724,236 to 3,725,960
_16485
AO356_16490: AO356_16490 - glutamyl-tRNA reductase, at 3,726,133 to 3,727,422
_16490
Position (kb)
3724
3725
3726 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3724.232 kb on - strand at 3724.283 kb on + strand at 3724.284 kb on - strand at 3724.284 kb on - strand at 3724.284 kb on - strand at 3724.682 kb on - strand, within AO356_16485 at 3724.682 kb on - strand, within AO356_16485 at 3724.729 kb on - strand, within AO356_16485 at 3724.729 kb on - strand, within AO356_16485 at 3724.787 kb on - strand, within AO356_16485 at 3724.802 kb on - strand, within AO356_16485 at 3724.802 kb on - strand, within AO356_16485 at 3724.825 kb on - strand, within AO356_16485 at 3724.825 kb on - strand, within AO356_16485 at 3724.904 kb on - strand, within AO356_16485 at 3724.931 kb on - strand, within AO356_16485 at 3725.036 kb on - strand, within AO356_16485 at 3725.114 kb on - strand, within AO356_16485 at 3725.186 kb on - strand, within AO356_16485 at 3725.186 kb on - strand, within AO356_16485 at 3725.541 kb on - strand, within AO356_16485 at 3725.543 kb on - strand, within AO356_16485 at 3725.543 kb on - strand, within AO356_16485 at 3725.543 kb on - strand, within AO356_16485 at 3725.543 kb on - strand, within AO356_16485 at 3725.543 kb on - strand, within AO356_16485 at 3725.543 kb on - strand, within AO356_16485 at 3725.543 kb on - strand, within AO356_16485 at 3725.543 kb on - strand, within AO356_16485 at 3725.543 kb on - strand, within AO356_16485 at 3725.675 kb on - strand, within AO356_16485 at 3725.741 kb on - strand, within AO356_16485 at 3725.741 kb on - strand, within AO356_16485 at 3725.741 kb on - strand, within AO356_16485 at 3725.741 kb on - strand, within AO356_16485 at 3725.741 kb on - strand, within AO356_16485 at 3725.741 kb on - strand, within AO356_16485 at 3725.741 kb on - strand, within AO356_16485 at 3725.741 kb on - strand, within AO356_16485 at 3725.955 kb on - strand at 3725.955 kb on - strand at 3725.955 kb on - strand at 3725.955 kb on - strand at 3725.955 kb on - strand at 3725.955 kb on - strand at 3725.955 kb on - strand at 3725.955 kb on - strand at 3725.955 kb on - strand at 3725.955 kb on - strand at 3725.961 kb on - strand at 3725.961 kb on - strand at 3725.961 kb on - strand at 3725.961 kb on - strand at 3725.961 kb on - strand at 3725.961 kb on - strand at 3725.963 kb on - strand at 3725.963 kb on - strand at 3725.963 kb on - strand at 3725.963 kb on - strand at 3726.021 kb on + strand at 3726.021 kb on + strand at 3726.038 kb on + strand at 3726.039 kb on - strand at 3726.058 kb on + strand at 3726.059 kb on - strand at 3726.092 kb on + strand at 3726.092 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 75 mM remove 3,724,232 - -0.2 3,724,283 + +1.5 3,724,284 - +1.4 3,724,284 - +0.4 3,724,284 - -0.6 3,724,682 - AO356_16485 0.26 -0.9 3,724,682 - AO356_16485 0.26 -1.7 3,724,729 - AO356_16485 0.29 -1.1 3,724,729 - AO356_16485 0.29 -1.2 3,724,787 - AO356_16485 0.32 -0.2 3,724,802 - AO356_16485 0.33 -2.0 3,724,802 - AO356_16485 0.33 -1.4 3,724,825 - AO356_16485 0.34 -1.9 3,724,825 - AO356_16485 0.34 -1.0 3,724,904 - AO356_16485 0.39 -1.4 3,724,931 - AO356_16485 0.40 -0.2 3,725,036 - AO356_16485 0.46 -1.3 3,725,114 - AO356_16485 0.51 -0.1 3,725,186 - AO356_16485 0.55 -2.0 3,725,186 - AO356_16485 0.55 +2.4 3,725,541 - AO356_16485 0.76 -0.2 3,725,543 - AO356_16485 0.76 -0.7 3,725,543 - AO356_16485 0.76 -0.9 3,725,543 - AO356_16485 0.76 -0.8 3,725,543 - AO356_16485 0.76 -1.3 3,725,543 - AO356_16485 0.76 -0.9 3,725,543 - AO356_16485 0.76 -0.2 3,725,543 - AO356_16485 0.76 -2.2 3,725,543 - AO356_16485 0.76 -1.7 3,725,543 - AO356_16485 0.76 -0.6 3,725,675 - AO356_16485 0.83 -1.9 3,725,741 - AO356_16485 0.87 -0.5 3,725,741 - AO356_16485 0.87 +0.7 3,725,741 - AO356_16485 0.87 -1.3 3,725,741 - AO356_16485 0.87 -1.1 3,725,741 - AO356_16485 0.87 -1.9 3,725,741 - AO356_16485 0.87 +0.9 3,725,741 - AO356_16485 0.87 -1.5 3,725,741 - AO356_16485 0.87 -1.1 3,725,955 - -0.1 3,725,955 - -1.4 3,725,955 - +0.0 3,725,955 - -1.7 3,725,955 - -1.0 3,725,955 - -1.4 3,725,955 - -2.3 3,725,955 - -1.5 3,725,955 - -2.0 3,725,955 - -2.0 3,725,961 - -1.2 3,725,961 - -0.9 3,725,961 - -0.2 3,725,961 - -0.7 3,725,961 - -1.7 3,725,961 - -1.6 3,725,963 - -0.8 3,725,963 - -0.3 3,725,963 - -1.1 3,725,963 - +0.6 3,726,021 + -0.8 3,726,021 + +0.0 3,726,038 + -1.3 3,726,039 - +1.1 3,726,058 + -0.4 3,726,059 - +0.3 3,726,092 + -1.3 3,726,092 + +0.0
Or see this region's nucleotide sequence