Experiment: perchlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_09425 and AO356_09430 are separated by 185 nucleotides AO356_09430 and AO356_09435 are separated by 41 nucleotides AO356_09435 and AO356_09440 are separated by 289 nucleotides
AO356_09425: AO356_09425 - malate dehydrogenase, at 2,135,097 to 2,136,365
_09425
AO356_09430: AO356_09430 - nuclease, at 2,136,551 to 2,137,333
_09430
AO356_09435: AO356_09435 - 50S ribosomal protein L31, at 2,137,375 to 2,137,599
_09435
AO356_09440: AO356_09440 - primosomal protein N', at 2,137,889 to 2,140,108
_09440
Position (kb)
2136
2137
2138 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2135.665 kb on + strand, within AO356_09425 at 2135.666 kb on - strand, within AO356_09425 at 2136.051 kb on + strand, within AO356_09425 at 2136.052 kb on - strand, within AO356_09425 at 2136.052 kb on - strand, within AO356_09425 at 2136.081 kb on + strand, within AO356_09425 at 2136.190 kb on + strand, within AO356_09425 at 2136.190 kb on + strand, within AO356_09425 at 2136.190 kb on + strand, within AO356_09425 at 2136.191 kb on - strand, within AO356_09425 at 2136.191 kb on - strand, within AO356_09425 at 2136.191 kb on - strand, within AO356_09425 at 2136.191 kb on - strand, within AO356_09425 at 2136.196 kb on + strand, within AO356_09425 at 2136.197 kb on - strand, within AO356_09425 at 2136.253 kb on + strand at 2136.254 kb on - strand at 2136.254 kb on - strand at 2136.254 kb on - strand at 2136.254 kb on - strand at 2136.335 kb on - strand at 2136.335 kb on - strand at 2136.383 kb on + strand at 2136.384 kb on - strand at 2136.384 kb on - strand at 2136.414 kb on - strand at 2136.414 kb on - strand at 2136.433 kb on + strand at 2136.434 kb on - strand at 2136.434 kb on - strand at 2136.434 kb on - strand at 2136.467 kb on + strand at 2136.467 kb on + strand at 2136.468 kb on - strand at 2136.468 kb on - strand at 2136.473 kb on - strand at 2136.501 kb on + strand at 2136.502 kb on - strand at 2136.502 kb on - strand at 2136.502 kb on - strand at 2137.002 kb on + strand, within AO356_09430 at 2137.003 kb on - strand at 2137.003 kb on - strand, within AO356_09430 at 2137.018 kb on + strand, within AO356_09430 at 2137.018 kb on + strand, within AO356_09430 at 2137.019 kb on - strand, within AO356_09430 at 2137.019 kb on - strand, within AO356_09430 at 2137.026 kb on + strand, within AO356_09430 at 2137.026 kb on + strand, within AO356_09430 at 2137.026 kb on + strand, within AO356_09430 at 2137.026 kb on + strand, within AO356_09430 at 2137.027 kb on - strand, within AO356_09430 at 2137.055 kb on + strand, within AO356_09430 at 2137.055 kb on + strand, within AO356_09430 at 2137.055 kb on + strand, within AO356_09430 at 2137.056 kb on - strand, within AO356_09430 at 2137.056 kb on - strand, within AO356_09430 at 2137.056 kb on - strand, within AO356_09430 at 2137.056 kb on - strand, within AO356_09430 at 2137.200 kb on + strand, within AO356_09430 at 2137.200 kb on + strand, within AO356_09430 at 2137.201 kb on - strand, within AO356_09430 at 2137.201 kb on - strand, within AO356_09430 at 2137.201 kb on - strand, within AO356_09430 at 2137.201 kb on - strand, within AO356_09430 at 2137.201 kb on - strand, within AO356_09430 at 2137.390 kb on - strand at 2137.390 kb on - strand at 2137.661 kb on - strand at 2137.707 kb on + strand at 2137.707 kb on + strand at 2137.709 kb on + strand at 2137.710 kb on - strand at 2137.710 kb on - strand at 2137.710 kb on - strand at 2137.710 kb on - strand at 2137.710 kb on - strand at 2137.710 kb on - strand at 2137.710 kb on - strand at 2137.710 kb on - strand at 2137.723 kb on + strand at 2137.724 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 75 mM remove 2,135,665 + AO356_09425 0.45 +0.6 2,135,666 - AO356_09425 0.45 -0.9 2,136,051 + AO356_09425 0.75 +0.6 2,136,052 - AO356_09425 0.75 -0.1 2,136,052 - AO356_09425 0.75 +0.5 2,136,081 + AO356_09425 0.78 +1.2 2,136,190 + AO356_09425 0.86 -0.5 2,136,190 + AO356_09425 0.86 +0.3 2,136,190 + AO356_09425 0.86 +0.9 2,136,191 - AO356_09425 0.86 +1.5 2,136,191 - AO356_09425 0.86 +1.0 2,136,191 - AO356_09425 0.86 -0.2 2,136,191 - AO356_09425 0.86 +1.3 2,136,196 + AO356_09425 0.87 -0.2 2,136,197 - AO356_09425 0.87 +1.7 2,136,253 + -1.5 2,136,254 - +1.4 2,136,254 - +0.3 2,136,254 - +2.3 2,136,254 - +1.5 2,136,335 - +1.0 2,136,335 - -0.7 2,136,383 + +0.4 2,136,384 - +0.7 2,136,384 - +0.1 2,136,414 - +0.5 2,136,414 - +1.1 2,136,433 + -0.0 2,136,434 - -1.0 2,136,434 - -1.5 2,136,434 - +1.3 2,136,467 + -2.2 2,136,467 + +0.5 2,136,468 - -1.0 2,136,468 - -0.7 2,136,473 - +0.0 2,136,501 + -0.1 2,136,502 - +0.1 2,136,502 - -0.1 2,136,502 - +0.8 2,137,002 + AO356_09430 0.58 -0.1 2,137,003 - +2.2 2,137,003 - AO356_09430 0.58 +0.3 2,137,018 + AO356_09430 0.60 +0.2 2,137,018 + AO356_09430 0.60 -0.5 2,137,019 - AO356_09430 0.60 -1.0 2,137,019 - AO356_09430 0.60 -0.3 2,137,026 + AO356_09430 0.61 -1.1 2,137,026 + AO356_09430 0.61 -0.4 2,137,026 + AO356_09430 0.61 -0.0 2,137,026 + AO356_09430 0.61 -1.8 2,137,027 - AO356_09430 0.61 -0.7 2,137,055 + AO356_09430 0.64 -1.0 2,137,055 + AO356_09430 0.64 +0.6 2,137,055 + AO356_09430 0.64 -0.4 2,137,056 - AO356_09430 0.64 -0.3 2,137,056 - AO356_09430 0.64 +1.1 2,137,056 - AO356_09430 0.64 -0.6 2,137,056 - AO356_09430 0.64 -0.1 2,137,200 + AO356_09430 0.83 +0.3 2,137,200 + AO356_09430 0.83 -1.1 2,137,201 - AO356_09430 0.83 -0.2 2,137,201 - AO356_09430 0.83 -1.2 2,137,201 - AO356_09430 0.83 -0.6 2,137,201 - AO356_09430 0.83 -0.5 2,137,201 - AO356_09430 0.83 +0.1 2,137,390 - +0.1 2,137,390 - +0.1 2,137,661 - -1.0 2,137,707 + -0.1 2,137,707 + +0.6 2,137,709 + -0.0 2,137,710 - +0.2 2,137,710 - +0.5 2,137,710 - -0.5 2,137,710 - +1.3 2,137,710 - +1.1 2,137,710 - -0.5 2,137,710 - +0.0 2,137,710 - +0.8 2,137,723 + +0.9 2,137,724 - -1.8
Or see this region's nucleotide sequence