Experiment: perchlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_08205 and AO356_08210 are separated by 30 nucleotides AO356_08210 and AO356_08215 are separated by 185 nucleotides
AO356_08205: AO356_08205 - ribosomal protein L11 methyltransferase, at 1,839,344 to 1,840,222
_08205
AO356_08210: AO356_08210 - hypothetical protein, at 1,840,253 to 1,841,485
_08210
AO356_08215: AO356_08215 - tRNA-dihydrouridine synthase B, at 1,841,671 to 1,842,678
_08215
Position (kb)
1840
1841
1842 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1839.282 kb on + strand at 1839.283 kb on - strand at 1839.283 kb on - strand at 1839.283 kb on - strand at 1839.283 kb on - strand at 1839.360 kb on + strand at 1839.360 kb on + strand at 1839.360 kb on + strand at 1839.395 kb on + strand at 1839.395 kb on + strand at 1839.395 kb on + strand at 1839.396 kb on - strand at 1839.417 kb on + strand at 1839.417 kb on + strand at 1839.482 kb on - strand, within AO356_08205 at 1839.825 kb on + strand, within AO356_08205 at 1839.825 kb on + strand, within AO356_08205 at 1839.980 kb on + strand, within AO356_08205 at 1839.981 kb on - strand, within AO356_08205 at 1839.981 kb on - strand, within AO356_08205 at 1840.148 kb on + strand at 1840.220 kb on + strand at 1840.220 kb on + strand at 1840.649 kb on + strand, within AO356_08210 at 1840.649 kb on + strand, within AO356_08210 at 1840.650 kb on - strand, within AO356_08210 at 1841.069 kb on + strand, within AO356_08210 at 1841.069 kb on + strand, within AO356_08210 at 1841.079 kb on - strand, within AO356_08210 at 1841.079 kb on - strand, within AO356_08210 at 1841.079 kb on - strand, within AO356_08210 at 1841.157 kb on + strand, within AO356_08210 at 1841.158 kb on - strand, within AO356_08210 at 1841.255 kb on + strand, within AO356_08210 at 1841.255 kb on + strand, within AO356_08210 at 1841.255 kb on + strand, within AO356_08210 at 1841.256 kb on - strand, within AO356_08210 at 1841.256 kb on - strand, within AO356_08210 at 1841.256 kb on - strand, within AO356_08210 at 1841.357 kb on + strand, within AO356_08210 at 1841.456 kb on + strand at 1841.456 kb on + strand at 1841.457 kb on - strand at 1841.457 kb on - strand at 1841.562 kb on + strand at 1841.562 kb on + strand at 1841.562 kb on + strand at 1841.563 kb on - strand at 1841.563 kb on - strand at 1841.563 kb on - strand at 1841.670 kb on + strand at 1841.670 kb on + strand at 1841.670 kb on + strand at 1841.670 kb on + strand at 1841.670 kb on + strand at 1841.670 kb on + strand at 1841.695 kb on + strand at 1841.695 kb on + strand at 1841.695 kb on + strand at 1841.697 kb on + strand at 1841.697 kb on + strand at 1841.697 kb on + strand at 1841.697 kb on + strand at 1841.697 kb on + strand at 1841.697 kb on + strand at 1841.697 kb on + strand at 1841.697 kb on + strand at 1841.697 kb on + strand at 1841.697 kb on + strand at 1841.697 kb on + strand at 1841.697 kb on + strand at 1841.697 kb on + strand at 1841.697 kb on + strand at 1841.697 kb on + strand at 1841.697 kb on + strand at 1841.697 kb on + strand at 1841.697 kb on + strand at 1841.697 kb on + strand at 1841.697 kb on + strand at 1842.208 kb on + strand, within AO356_08215 at 1842.226 kb on + strand, within AO356_08215 at 1842.397 kb on + strand, within AO356_08215 at 1842.397 kb on + strand, within AO356_08215 at 1842.397 kb on + strand, within AO356_08215 at 1842.397 kb on + strand, within AO356_08215 at 1842.450 kb on + strand, within AO356_08215 at 1842.476 kb on + strand, within AO356_08215 at 1842.476 kb on + strand, within AO356_08215 at 1842.476 kb on + strand, within AO356_08215 at 1842.476 kb on + strand, within AO356_08215 at 1842.476 kb on + strand, within AO356_08215
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 75 mM remove 1,839,282 + +0.3 1,839,283 - -0.7 1,839,283 - +0.4 1,839,283 - +0.4 1,839,283 - -0.5 1,839,360 + +1.6 1,839,360 + -1.7 1,839,360 + -1.3 1,839,395 + -0.8 1,839,395 + +0.1 1,839,395 + -0.7 1,839,396 - -0.5 1,839,417 + +0.3 1,839,417 + +0.0 1,839,482 - AO356_08205 0.16 -0.1 1,839,825 + AO356_08205 0.55 -1.6 1,839,825 + AO356_08205 0.55 +0.3 1,839,980 + AO356_08205 0.72 +0.4 1,839,981 - AO356_08205 0.72 -0.3 1,839,981 - AO356_08205 0.72 +0.3 1,840,148 + -2.2 1,840,220 + -0.2 1,840,220 + +0.1 1,840,649 + AO356_08210 0.32 +1.2 1,840,649 + AO356_08210 0.32 -0.8 1,840,650 - AO356_08210 0.32 -1.1 1,841,069 + AO356_08210 0.66 -0.3 1,841,069 + AO356_08210 0.66 -1.0 1,841,079 - AO356_08210 0.67 -1.3 1,841,079 - AO356_08210 0.67 -0.4 1,841,079 - AO356_08210 0.67 -0.6 1,841,157 + AO356_08210 0.73 -1.8 1,841,158 - AO356_08210 0.73 -0.5 1,841,255 + AO356_08210 0.81 +1.1 1,841,255 + AO356_08210 0.81 -0.1 1,841,255 + AO356_08210 0.81 -0.8 1,841,256 - AO356_08210 0.81 -0.9 1,841,256 - AO356_08210 0.81 -1.3 1,841,256 - AO356_08210 0.81 -1.3 1,841,357 + AO356_08210 0.90 -1.0 1,841,456 + +0.1 1,841,456 + -1.3 1,841,457 - -0.9 1,841,457 - +1.2 1,841,562 + +1.8 1,841,562 + -1.2 1,841,562 + -0.1 1,841,563 - +0.4 1,841,563 - -1.5 1,841,563 - -0.7 1,841,670 + -0.6 1,841,670 + -0.9 1,841,670 + -0.3 1,841,670 + +0.6 1,841,670 + -0.5 1,841,670 + +0.0 1,841,695 + +0.2 1,841,695 + -0.8 1,841,695 + +0.2 1,841,697 + -0.7 1,841,697 + -1.5 1,841,697 + -0.5 1,841,697 + +0.7 1,841,697 + -0.4 1,841,697 + -1.0 1,841,697 + -0.5 1,841,697 + +0.2 1,841,697 + +0.8 1,841,697 + +0.8 1,841,697 + -0.4 1,841,697 + -1.5 1,841,697 + +0.2 1,841,697 + -0.6 1,841,697 + -0.3 1,841,697 + -0.5 1,841,697 + +0.2 1,841,697 + +0.1 1,841,697 + +0.5 1,841,697 + -0.9 1,842,208 + AO356_08215 0.53 -0.3 1,842,226 + AO356_08215 0.55 -0.8 1,842,397 + AO356_08215 0.72 +1.5 1,842,397 + AO356_08215 0.72 +0.1 1,842,397 + AO356_08215 0.72 +0.6 1,842,397 + AO356_08215 0.72 +1.0 1,842,450 + AO356_08215 0.77 -0.5 1,842,476 + AO356_08215 0.80 +0.8 1,842,476 + AO356_08215 0.80 +0.7 1,842,476 + AO356_08215 0.80 +0.3 1,842,476 + AO356_08215 0.80 +0.4 1,842,476 + AO356_08215 0.80 -0.1
Or see this region's nucleotide sequence