Experiment: perchlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_07045 and AO356_07050 are separated by 2 nucleotides AO356_07050 and AO356_07055 are separated by 15 nucleotides AO356_07055 and AO356_07060 are separated by 197 nucleotides
AO356_07045: AO356_07045 - PTS fructose transporter subunit IIA, at 1,554,101 to 1,554,565
_07045
AO356_07050: AO356_07050 - glmZ(sRNA)-inactivating NTPase, at 1,554,568 to 1,555,425
_07050
AO356_07055: AO356_07055 - phosphocarrier protein HPr, at 1,555,441 to 1,555,716
_07055
AO356_07060: AO356_07060 - divalent cation transporter, at 1,555,914 to 1,556,804
_07060
Position (kb)
1555
1556 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1554.606 kb on + strand at 1554.607 kb on - strand at 1554.646 kb on + strand at 1554.646 kb on + strand at 1554.647 kb on - strand at 1554.647 kb on - strand at 1554.647 kb on - strand at 1554.813 kb on + strand, within AO356_07050 at 1554.814 kb on - strand, within AO356_07050 at 1554.833 kb on - strand, within AO356_07050 at 1554.833 kb on - strand, within AO356_07050 at 1555.006 kb on + strand, within AO356_07050 at 1555.006 kb on + strand, within AO356_07050 at 1555.007 kb on - strand, within AO356_07050 at 1555.106 kb on + strand, within AO356_07050 at 1555.204 kb on + strand, within AO356_07050 at 1555.238 kb on - strand, within AO356_07050 at 1555.255 kb on + strand, within AO356_07050 at 1555.255 kb on + strand, within AO356_07050 at 1555.256 kb on - strand, within AO356_07050 at 1555.256 kb on - strand, within AO356_07050 at 1555.300 kb on + strand, within AO356_07050 at 1555.300 kb on + strand, within AO356_07050 at 1555.301 kb on - strand, within AO356_07050 at 1555.301 kb on - strand, within AO356_07050 at 1555.301 kb on - strand, within AO356_07050 at 1555.324 kb on - strand, within AO356_07050 at 1555.348 kb on + strand at 1555.349 kb on - strand at 1555.349 kb on - strand at 1555.349 kb on - strand at 1555.349 kb on - strand at 1555.349 kb on - strand at 1555.424 kb on - strand at 1555.424 kb on - strand at 1555.424 kb on - strand at 1555.679 kb on + strand, within AO356_07055 at 1555.679 kb on + strand, within AO356_07055 at 1555.680 kb on - strand, within AO356_07055 at 1555.696 kb on + strand at 1555.866 kb on + strand at 1555.866 kb on + strand at 1555.866 kb on + strand at 1555.867 kb on - strand at 1555.869 kb on + strand at 1555.869 kb on + strand at 1555.869 kb on + strand at 1555.869 kb on + strand at 1555.870 kb on - strand at 1555.870 kb on - strand at 1556.419 kb on + strand, within AO356_07060 at 1556.419 kb on + strand, within AO356_07060 at 1556.420 kb on - strand, within AO356_07060 at 1556.420 kb on - strand, within AO356_07060 at 1556.420 kb on - strand, within AO356_07060 at 1556.456 kb on + strand, within AO356_07060 at 1556.456 kb on + strand, within AO356_07060 at 1556.457 kb on - strand, within AO356_07060 at 1556.457 kb on - strand, within AO356_07060 at 1556.457 kb on - strand, within AO356_07060
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 75 mM remove 1,554,606 + +0.4 1,554,607 - +1.4 1,554,646 + +0.6 1,554,646 + +0.7 1,554,647 - +0.7 1,554,647 - +0.0 1,554,647 - +0.3 1,554,813 + AO356_07050 0.29 -0.0 1,554,814 - AO356_07050 0.29 +1.3 1,554,833 - AO356_07050 0.31 -0.1 1,554,833 - AO356_07050 0.31 +0.1 1,555,006 + AO356_07050 0.51 +0.2 1,555,006 + AO356_07050 0.51 +0.1 1,555,007 - AO356_07050 0.51 +0.3 1,555,106 + AO356_07050 0.63 -1.2 1,555,204 + AO356_07050 0.74 +0.3 1,555,238 - AO356_07050 0.78 +0.0 1,555,255 + AO356_07050 0.80 -0.0 1,555,255 + AO356_07050 0.80 +0.1 1,555,256 - AO356_07050 0.80 +0.1 1,555,256 - AO356_07050 0.80 +1.2 1,555,300 + AO356_07050 0.85 +0.5 1,555,300 + AO356_07050 0.85 -0.1 1,555,301 - AO356_07050 0.85 +0.7 1,555,301 - AO356_07050 0.85 +0.7 1,555,301 - AO356_07050 0.85 +1.6 1,555,324 - AO356_07050 0.88 -0.0 1,555,348 + -0.9 1,555,349 - -0.5 1,555,349 - +1.6 1,555,349 - -1.1 1,555,349 - +0.4 1,555,349 - +0.0 1,555,424 - +0.3 1,555,424 - -1.1 1,555,424 - +2.0 1,555,679 + AO356_07055 0.86 -1.5 1,555,679 + AO356_07055 0.86 -0.2 1,555,680 - AO356_07055 0.87 -2.5 1,555,696 + -0.2 1,555,866 + +0.7 1,555,866 + -0.2 1,555,866 + +1.5 1,555,867 - -0.2 1,555,869 + +0.3 1,555,869 + -0.1 1,555,869 + -0.8 1,555,869 + +0.1 1,555,870 - -0.2 1,555,870 - +0.8 1,556,419 + AO356_07060 0.57 +0.1 1,556,419 + AO356_07060 0.57 +1.5 1,556,420 - AO356_07060 0.57 -0.3 1,556,420 - AO356_07060 0.57 -0.3 1,556,420 - AO356_07060 0.57 +0.6 1,556,456 + AO356_07060 0.61 +0.3 1,556,456 + AO356_07060 0.61 +1.4 1,556,457 - AO356_07060 0.61 +0.8 1,556,457 - AO356_07060 0.61 +0.5 1,556,457 - AO356_07060 0.61 -1.3
Or see this region's nucleotide sequence