Experiment: perchlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_06505 and AO356_06510 are separated by 105 nucleotides AO356_06510 and AO356_06515 are separated by 377 nucleotides
AO356_06505: AO356_06505 - pyridine nucleotide-disulfide oxidoreductase, at 1,439,331 to 1,440,224
_06505
AO356_06510: AO356_06510 - TetR family transcriptional regulator, at 1,440,330 to 1,440,959
_06510
AO356_06515: AO356_06515 - hypothetical protein, at 1,441,337 to 1,442,617
_06515
Position (kb)
1440
1441 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1439.434 kb on + strand, within AO356_06505 at 1439.435 kb on - strand, within AO356_06505 at 1439.435 kb on - strand, within AO356_06505 at 1439.435 kb on - strand, within AO356_06505 at 1439.435 kb on - strand, within AO356_06505 at 1439.435 kb on - strand, within AO356_06505 at 1439.750 kb on - strand, within AO356_06505 at 1439.761 kb on + strand, within AO356_06505 at 1439.761 kb on + strand, within AO356_06505 at 1439.761 kb on + strand, within AO356_06505 at 1439.762 kb on - strand, within AO356_06505 at 1439.762 kb on - strand, within AO356_06505 at 1439.762 kb on - strand, within AO356_06505 at 1439.762 kb on - strand, within AO356_06505 at 1439.762 kb on - strand, within AO356_06505 at 1439.762 kb on - strand, within AO356_06505 at 1439.762 kb on - strand, within AO356_06505 at 1439.762 kb on - strand, within AO356_06505 at 1439.762 kb on - strand, within AO356_06505 at 1439.830 kb on + strand, within AO356_06505 at 1439.830 kb on + strand, within AO356_06505 at 1439.905 kb on + strand, within AO356_06505 at 1439.905 kb on + strand, within AO356_06505 at 1439.905 kb on + strand, within AO356_06505 at 1439.906 kb on - strand, within AO356_06505 at 1439.906 kb on - strand, within AO356_06505 at 1439.906 kb on - strand, within AO356_06505 at 1440.271 kb on + strand at 1440.380 kb on - strand at 1440.472 kb on + strand, within AO356_06510 at 1440.489 kb on + strand, within AO356_06510 at 1440.489 kb on + strand, within AO356_06510 at 1440.489 kb on + strand, within AO356_06510 at 1440.489 kb on + strand, within AO356_06510 at 1440.490 kb on - strand, within AO356_06510 at 1440.490 kb on - strand, within AO356_06510 at 1440.490 kb on - strand, within AO356_06510 at 1440.570 kb on - strand, within AO356_06510 at 1440.570 kb on - strand, within AO356_06510 at 1440.735 kb on + strand, within AO356_06510 at 1440.735 kb on + strand, within AO356_06510 at 1440.735 kb on + strand, within AO356_06510 at 1440.736 kb on - strand, within AO356_06510 at 1440.736 kb on - strand, within AO356_06510 at 1440.736 kb on - strand, within AO356_06510 at 1440.736 kb on - strand, within AO356_06510 at 1440.859 kb on + strand, within AO356_06510 at 1440.912 kb on + strand at 1440.912 kb on + strand at 1440.912 kb on + strand at 1440.913 kb on - strand at 1440.913 kb on - strand at 1440.913 kb on - strand at 1440.913 kb on - strand at 1441.053 kb on + strand at 1441.069 kb on + strand at 1441.069 kb on + strand at 1441.095 kb on + strand at 1441.096 kb on - strand at 1441.096 kb on - strand at 1441.121 kb on + strand at 1441.196 kb on + strand at 1441.196 kb on + strand at 1441.197 kb on - strand at 1441.197 kb on - strand at 1441.197 kb on - strand at 1441.197 kb on - strand at 1441.197 kb on - strand at 1441.197 kb on - strand at 1441.197 kb on - strand at 1441.197 kb on - strand at 1441.197 kb on - strand at 1441.406 kb on - strand at 1441.406 kb on - strand at 1441.462 kb on + strand at 1441.462 kb on + strand at 1441.463 kb on - strand at 1441.463 kb on - strand at 1441.463 kb on - strand at 1441.463 kb on - strand at 1441.463 kb on - strand at 1441.463 kb on - strand at 1441.463 kb on - strand at 1441.492 kb on + strand, within AO356_06515 at 1441.523 kb on + strand, within AO356_06515 at 1441.523 kb on + strand, within AO356_06515 at 1441.524 kb on - strand, within AO356_06515 at 1441.524 kb on - strand, within AO356_06515 at 1441.529 kb on + strand, within AO356_06515 at 1441.529 kb on + strand, within AO356_06515 at 1441.529 kb on + strand, within AO356_06515 at 1441.529 kb on + strand, within AO356_06515 at 1441.529 kb on + strand, within AO356_06515 at 1441.529 kb on + strand, within AO356_06515 at 1441.529 kb on + strand, within AO356_06515 at 1441.529 kb on + strand, within AO356_06515 at 1441.529 kb on + strand, within AO356_06515 at 1441.530 kb on - strand, within AO356_06515 at 1441.530 kb on - strand, within AO356_06515 at 1441.530 kb on - strand, within AO356_06515 at 1441.530 kb on - strand, within AO356_06515 at 1441.530 kb on - strand, within AO356_06515 at 1441.530 kb on - strand, within AO356_06515 at 1441.530 kb on - strand, within AO356_06515 at 1441.535 kb on + strand, within AO356_06515 at 1441.535 kb on + strand, within AO356_06515 at 1441.536 kb on - strand, within AO356_06515 at 1441.538 kb on - strand, within AO356_06515 at 1441.545 kb on + strand, within AO356_06515 at 1441.545 kb on + strand, within AO356_06515 at 1441.545 kb on + strand, within AO356_06515 at 1441.546 kb on - strand, within AO356_06515 at 1441.905 kb on + strand, within AO356_06515 at 1441.906 kb on - strand, within AO356_06515 at 1441.917 kb on + strand, within AO356_06515 at 1441.917 kb on + strand, within AO356_06515 at 1441.917 kb on + strand, within AO356_06515 at 1441.918 kb on - strand, within AO356_06515 at 1441.918 kb on - strand, within AO356_06515 at 1441.918 kb on - strand, within AO356_06515
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 75 mM remove 1,439,434 + AO356_06505 0.12 -0.0 1,439,435 - AO356_06505 0.12 +0.7 1,439,435 - AO356_06505 0.12 +0.5 1,439,435 - AO356_06505 0.12 +0.3 1,439,435 - AO356_06505 0.12 -0.2 1,439,435 - AO356_06505 0.12 +0.1 1,439,750 - AO356_06505 0.47 -0.0 1,439,761 + AO356_06505 0.48 +0.2 1,439,761 + AO356_06505 0.48 +1.4 1,439,761 + AO356_06505 0.48 +1.1 1,439,762 - AO356_06505 0.48 -0.8 1,439,762 - AO356_06505 0.48 -0.2 1,439,762 - AO356_06505 0.48 -0.1 1,439,762 - AO356_06505 0.48 -0.5 1,439,762 - AO356_06505 0.48 +1.1 1,439,762 - AO356_06505 0.48 +0.2 1,439,762 - AO356_06505 0.48 +0.8 1,439,762 - AO356_06505 0.48 +0.8 1,439,762 - AO356_06505 0.48 +1.0 1,439,830 + AO356_06505 0.56 -0.3 1,439,830 + AO356_06505 0.56 +1.0 1,439,905 + AO356_06505 0.64 +0.7 1,439,905 + AO356_06505 0.64 +0.8 1,439,905 + AO356_06505 0.64 +1.0 1,439,906 - AO356_06505 0.64 +0.4 1,439,906 - AO356_06505 0.64 +1.1 1,439,906 - AO356_06505 0.64 +1.4 1,440,271 + +0.3 1,440,380 - +1.6 1,440,472 + AO356_06510 0.23 -0.6 1,440,489 + AO356_06510 0.25 +0.5 1,440,489 + AO356_06510 0.25 -0.5 1,440,489 + AO356_06510 0.25 +0.4 1,440,489 + AO356_06510 0.25 -0.6 1,440,490 - AO356_06510 0.25 +0.2 1,440,490 - AO356_06510 0.25 +0.1 1,440,490 - AO356_06510 0.25 -0.6 1,440,570 - AO356_06510 0.38 +1.2 1,440,570 - AO356_06510 0.38 +0.8 1,440,735 + AO356_06510 0.64 -0.3 1,440,735 + AO356_06510 0.64 +0.2 1,440,735 + AO356_06510 0.64 +1.3 1,440,736 - AO356_06510 0.64 -1.1 1,440,736 - AO356_06510 0.64 +0.4 1,440,736 - AO356_06510 0.64 -0.3 1,440,736 - AO356_06510 0.64 -1.1 1,440,859 + AO356_06510 0.84 -0.7 1,440,912 + -1.3 1,440,912 + +0.8 1,440,912 + +1.4 1,440,913 - -0.4 1,440,913 - -0.6 1,440,913 - +1.3 1,440,913 - +0.0 1,441,053 + -0.1 1,441,069 + -2.2 1,441,069 + -1.8 1,441,095 + +1.2 1,441,096 - -0.2 1,441,096 - +1.3 1,441,121 + -0.5 1,441,196 + +0.7 1,441,196 + +0.1 1,441,197 - -0.7 1,441,197 - +1.0 1,441,197 - +1.5 1,441,197 - -1.4 1,441,197 - -0.3 1,441,197 - +0.1 1,441,197 - +0.6 1,441,197 - -1.3 1,441,197 - +0.9 1,441,406 - +0.1 1,441,406 - -0.3 1,441,462 + -0.5 1,441,462 + +0.0 1,441,463 - -0.4 1,441,463 - +0.1 1,441,463 - +0.4 1,441,463 - -0.1 1,441,463 - -0.1 1,441,463 - +0.4 1,441,463 - -0.8 1,441,492 + AO356_06515 0.12 -1.0 1,441,523 + AO356_06515 0.15 +0.6 1,441,523 + AO356_06515 0.15 -1.0 1,441,524 - AO356_06515 0.15 +1.3 1,441,524 - AO356_06515 0.15 +0.2 1,441,529 + AO356_06515 0.15 -0.1 1,441,529 + AO356_06515 0.15 -0.8 1,441,529 + AO356_06515 0.15 +0.8 1,441,529 + AO356_06515 0.15 +1.3 1,441,529 + AO356_06515 0.15 -0.6 1,441,529 + AO356_06515 0.15 -0.2 1,441,529 + AO356_06515 0.15 +0.3 1,441,529 + AO356_06515 0.15 +0.5 1,441,529 + AO356_06515 0.15 -0.4 1,441,530 - AO356_06515 0.15 +0.3 1,441,530 - AO356_06515 0.15 +2.0 1,441,530 - AO356_06515 0.15 -0.2 1,441,530 - AO356_06515 0.15 -1.3 1,441,530 - AO356_06515 0.15 +1.7 1,441,530 - AO356_06515 0.15 -1.0 1,441,530 - AO356_06515 0.15 -0.1 1,441,535 + AO356_06515 0.15 -0.4 1,441,535 + AO356_06515 0.15 +0.7 1,441,536 - AO356_06515 0.16 +1.1 1,441,538 - AO356_06515 0.16 +0.2 1,441,545 + AO356_06515 0.16 +0.2 1,441,545 + AO356_06515 0.16 -0.1 1,441,545 + AO356_06515 0.16 +1.2 1,441,546 - AO356_06515 0.16 -0.4 1,441,905 + AO356_06515 0.44 +0.4 1,441,906 - AO356_06515 0.44 -1.7 1,441,917 + AO356_06515 0.45 +0.7 1,441,917 + AO356_06515 0.45 +0.4 1,441,917 + AO356_06515 0.45 +0.6 1,441,918 - AO356_06515 0.45 +0.2 1,441,918 - AO356_06515 0.45 -0.3 1,441,918 - AO356_06515 0.45 +0.2
Or see this region's nucleotide sequence