Experiment: perchlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_05630 and AO356_05635 are separated by 4 nucleotides AO356_05635 and AO356_05640 are separated by 72 nucleotides AO356_05640 and AO356_05645 are separated by 213 nucleotides
AO356_05630: AO356_05630 - LysR family transcriptional regulator, at 1,261,305 to 1,262,231
_05630
AO356_05635: AO356_05635 - diacylglycerol kinase, at 1,262,236 to 1,262,598
_05635
AO356_05640: AO356_05640 - LuxR family transcriptional regulator, at 1,262,671 to 1,263,324
_05640
AO356_05645: AO356_05645 - hypothetical protein, at 1,263,538 to 1,264,284
_05645
Position (kb)
1262
1263
1264 Strain fitness (log2 ratio)
-2
-1
0
1 at 1261.720 kb on - strand, within AO356_05630 at 1262.109 kb on + strand, within AO356_05630 at 1262.109 kb on + strand, within AO356_05630 at 1262.109 kb on + strand, within AO356_05630 at 1262.110 kb on - strand, within AO356_05630 at 1262.110 kb on - strand, within AO356_05630 at 1262.133 kb on + strand, within AO356_05630 at 1262.134 kb on - strand, within AO356_05630 at 1262.543 kb on + strand, within AO356_05635 at 1262.586 kb on + strand at 1262.587 kb on - strand at 1262.587 kb on - strand at 1262.598 kb on + strand at 1262.598 kb on + strand at 1262.598 kb on + strand at 1262.598 kb on + strand at 1262.598 kb on + strand at 1262.598 kb on + strand at 1262.598 kb on + strand at 1262.598 kb on + strand at 1262.598 kb on + strand at 1262.598 kb on + strand at 1262.598 kb on + strand at 1262.598 kb on + strand at 1262.598 kb on + strand at 1262.598 kb on + strand at 1262.599 kb on - strand at 1262.599 kb on - strand at 1262.599 kb on - strand at 1262.599 kb on - strand at 1262.599 kb on - strand at 1262.599 kb on - strand at 1262.599 kb on - strand at 1262.599 kb on - strand at 1262.599 kb on - strand at 1262.599 kb on - strand at 1262.635 kb on - strand at 1262.635 kb on - strand at 1262.672 kb on + strand at 1262.672 kb on + strand at 1262.672 kb on + strand at 1262.735 kb on - strand at 1262.735 kb on - strand at 1262.735 kb on - strand at 1262.735 kb on - strand at 1262.775 kb on + strand, within AO356_05640 at 1262.775 kb on + strand, within AO356_05640 at 1262.776 kb on - strand, within AO356_05640 at 1262.801 kb on + strand, within AO356_05640 at 1262.802 kb on - strand, within AO356_05640 at 1263.131 kb on + strand, within AO356_05640 at 1263.131 kb on + strand, within AO356_05640 at 1263.131 kb on + strand, within AO356_05640 at 1263.314 kb on + strand at 1263.314 kb on + strand at 1263.314 kb on + strand at 1263.315 kb on - strand at 1263.315 kb on - strand at 1263.315 kb on - strand at 1263.315 kb on - strand at 1263.449 kb on + strand at 1263.450 kb on - strand at 1263.450 kb on - strand at 1263.540 kb on - strand at 1263.550 kb on + strand at 1263.550 kb on + strand at 1263.550 kb on + strand at 1263.550 kb on + strand at 1263.550 kb on + strand at 1263.551 kb on - strand at 1263.551 kb on - strand at 1263.551 kb on - strand at 1263.551 kb on - strand at 1263.564 kb on + strand at 1263.638 kb on + strand, within AO356_05645 at 1263.638 kb on + strand, within AO356_05645 at 1263.638 kb on + strand, within AO356_05645 at 1263.639 kb on - strand, within AO356_05645 at 1263.639 kb on - strand, within AO356_05645 at 1263.662 kb on + strand, within AO356_05645 at 1263.822 kb on - strand, within AO356_05645 at 1263.822 kb on - strand, within AO356_05645 at 1263.938 kb on + strand, within AO356_05645 at 1263.938 kb on + strand, within AO356_05645 at 1263.938 kb on + strand, within AO356_05645 at 1263.938 kb on + strand, within AO356_05645 at 1263.938 kb on + strand, within AO356_05645 at 1263.939 kb on - strand, within AO356_05645 at 1263.939 kb on - strand, within AO356_05645 at 1263.939 kb on - strand, within AO356_05645 at 1263.959 kb on + strand, within AO356_05645 at 1263.959 kb on + strand, within AO356_05645 at 1263.959 kb on + strand, within AO356_05645 at 1263.959 kb on + strand, within AO356_05645 at 1263.959 kb on + strand, within AO356_05645 at 1263.959 kb on + strand, within AO356_05645 at 1263.959 kb on + strand, within AO356_05645 at 1263.960 kb on - strand, within AO356_05645 at 1263.960 kb on - strand, within AO356_05645 at 1263.960 kb on - strand, within AO356_05645 at 1263.960 kb on - strand, within AO356_05645
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 75 mM remove 1,261,720 - AO356_05630 0.45 -0.5 1,262,109 + AO356_05630 0.87 -0.4 1,262,109 + AO356_05630 0.87 -1.7 1,262,109 + AO356_05630 0.87 +1.1 1,262,110 - AO356_05630 0.87 -0.3 1,262,110 - AO356_05630 0.87 +0.3 1,262,133 + AO356_05630 0.89 -0.1 1,262,134 - AO356_05630 0.89 +0.6 1,262,543 + AO356_05635 0.85 +0.2 1,262,586 + -0.8 1,262,587 - -0.5 1,262,587 - +0.2 1,262,598 + -0.1 1,262,598 + +0.9 1,262,598 + -0.5 1,262,598 + +0.9 1,262,598 + +0.6 1,262,598 + -0.2 1,262,598 + -1.7 1,262,598 + -1.3 1,262,598 + -0.0 1,262,598 + -1.1 1,262,598 + -1.6 1,262,598 + -1.2 1,262,598 + +0.2 1,262,598 + -0.3 1,262,599 - -0.6 1,262,599 - -0.1 1,262,599 - +0.5 1,262,599 - -0.5 1,262,599 - -0.4 1,262,599 - +0.9 1,262,599 - -0.1 1,262,599 - -0.9 1,262,599 - -0.2 1,262,599 - -1.2 1,262,635 - +0.4 1,262,635 - +0.9 1,262,672 + +0.1 1,262,672 + +1.4 1,262,672 + -0.1 1,262,735 - -0.6 1,262,735 - +1.0 1,262,735 - +0.5 1,262,735 - +0.4 1,262,775 + AO356_05640 0.16 -0.1 1,262,775 + AO356_05640 0.16 -1.5 1,262,776 - AO356_05640 0.16 +0.9 1,262,801 + AO356_05640 0.20 -0.5 1,262,802 - AO356_05640 0.20 +0.9 1,263,131 + AO356_05640 0.70 -1.3 1,263,131 + AO356_05640 0.70 -0.7 1,263,131 + AO356_05640 0.70 -0.1 1,263,314 + -0.9 1,263,314 + +0.8 1,263,314 + -1.3 1,263,315 - -2.0 1,263,315 - +0.1 1,263,315 - -0.6 1,263,315 - -0.0 1,263,449 + +0.8 1,263,450 - -1.0 1,263,450 - +0.9 1,263,540 - -1.4 1,263,550 + +0.4 1,263,550 + +0.8 1,263,550 + +0.6 1,263,550 + +0.5 1,263,550 + +0.4 1,263,551 - +1.6 1,263,551 - -0.2 1,263,551 - +0.5 1,263,551 - +0.0 1,263,564 + -0.2 1,263,638 + AO356_05645 0.13 -0.3 1,263,638 + AO356_05645 0.13 +0.3 1,263,638 + AO356_05645 0.13 +0.4 1,263,639 - AO356_05645 0.14 +0.1 1,263,639 - AO356_05645 0.14 -0.9 1,263,662 + AO356_05645 0.17 -1.1 1,263,822 - AO356_05645 0.38 -0.8 1,263,822 - AO356_05645 0.38 +0.7 1,263,938 + AO356_05645 0.54 -0.1 1,263,938 + AO356_05645 0.54 -0.2 1,263,938 + AO356_05645 0.54 +0.6 1,263,938 + AO356_05645 0.54 -0.4 1,263,938 + AO356_05645 0.54 -0.2 1,263,939 - AO356_05645 0.54 +1.0 1,263,939 - AO356_05645 0.54 +0.2 1,263,939 - AO356_05645 0.54 +0.2 1,263,959 + AO356_05645 0.56 +1.5 1,263,959 + AO356_05645 0.56 +0.1 1,263,959 + AO356_05645 0.56 +0.3 1,263,959 + AO356_05645 0.56 -0.5 1,263,959 + AO356_05645 0.56 -1.0 1,263,959 + AO356_05645 0.56 +1.4 1,263,959 + AO356_05645 0.56 +1.0 1,263,960 - AO356_05645 0.56 +0.5 1,263,960 - AO356_05645 0.56 -1.0 1,263,960 - AO356_05645 0.56 +1.2 1,263,960 - AO356_05645 0.56 +1.4
Or see this region's nucleotide sequence