Experiment: perchlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_03240 and AO356_03245 are separated by 8 nucleotides AO356_03245 and AO356_03250 are separated by 249 nucleotides AO356_03250 and AO356_03255 are separated by 100 nucleotides
AO356_03240: AO356_03240 - transcription elongation factor GreB, at 719,704 to 720,201
_03240
AO356_03245: AO356_03245 - hypothetical protein, at 720,210 to 720,518
_03245
AO356_03250: AO356_03250 - DoxX family protein, at 720,768 to 721,202
_03250
AO356_03255: AO356_03255 - glycosylase, at 721,303 to 722,724
_03255
Position (kb) 720
721
722 Strain fitness (log2 ratio) -2
-1
0
1 at 719.873 kb on - strand, within AO356_03240 at 719.873 kb on - strand, within AO356_03240 at 719.873 kb on - strand, within AO356_03240 at 719.873 kb on - strand, within AO356_03240 at 719.878 kb on + strand, within AO356_03240 at 719.879 kb on - strand, within AO356_03240 at 719.986 kb on + strand, within AO356_03240 at 720.038 kb on - strand, within AO356_03240 at 720.175 kb on + strand at 720.175 kb on + strand at 720.176 kb on - strand at 720.176 kb on - strand at 720.410 kb on - strand, within AO356_03245 at 720.410 kb on - strand, within AO356_03245 at 720.495 kb on + strand at 720.495 kb on + strand at 720.495 kb on + strand at 720.495 kb on + strand at 720.496 kb on - strand at 720.496 kb on - strand at 720.496 kb on - strand at 720.496 kb on - strand at 720.496 kb on - strand at 720.496 kb on - strand at 720.496 kb on - strand at 720.616 kb on - strand at 720.652 kb on + strand at 720.652 kb on + strand at 720.652 kb on + strand at 720.653 kb on - strand at 720.653 kb on - strand at 720.653 kb on - strand at 720.660 kb on + strand at 720.660 kb on + strand at 720.684 kb on + strand at 720.685 kb on - strand at 720.723 kb on + strand at 720.736 kb on + strand at 720.736 kb on + strand at 720.736 kb on + strand at 720.737 kb on - strand at 720.737 kb on - strand at 720.827 kb on + strand, within AO356_03250 at 720.828 kb on - strand, within AO356_03250 at 720.860 kb on - strand, within AO356_03250 at 721.021 kb on + strand, within AO356_03250 at 721.021 kb on + strand, within AO356_03250 at 721.021 kb on + strand, within AO356_03250 at 721.022 kb on - strand, within AO356_03250 at 721.122 kb on + strand, within AO356_03250 at 721.122 kb on + strand, within AO356_03250 at 721.123 kb on - strand, within AO356_03250 at 721.123 kb on - strand, within AO356_03250 at 721.123 kb on - strand, within AO356_03250 at 721.123 kb on - strand, within AO356_03250 at 721.202 kb on + strand at 721.202 kb on + strand at 721.203 kb on - strand at 721.203 kb on - strand at 721.203 kb on - strand at 721.203 kb on - strand at 721.221 kb on + strand at 721.221 kb on + strand at 721.222 kb on - strand at 721.222 kb on - strand at 721.222 kb on - strand at 721.225 kb on - strand at 721.309 kb on - strand at 721.370 kb on + strand at 721.370 kb on + strand at 721.371 kb on - strand at 721.371 kb on - strand at 721.371 kb on - strand at 721.373 kb on + strand at 721.374 kb on - strand at 721.374 kb on - strand at 721.377 kb on + strand at 721.377 kb on + strand at 721.377 kb on + strand at 721.377 kb on + strand at 721.377 kb on + strand at 721.378 kb on - strand at 721.378 kb on - strand at 721.386 kb on + strand at 721.387 kb on - strand at 721.389 kb on + strand at 721.389 kb on + strand at 721.389 kb on + strand at 721.389 kb on + strand at 721.390 kb on - strand at 721.390 kb on - strand at 721.390 kb on - strand at 721.390 kb on - strand at 721.390 kb on - strand at 721.390 kb on - strand at 721.394 kb on + strand at 721.394 kb on + strand at 721.394 kb on + strand at 721.394 kb on + strand at 721.394 kb on + strand at 721.394 kb on + strand at 721.395 kb on - strand at 721.395 kb on - strand at 721.395 kb on - strand at 721.395 kb on - strand at 721.395 kb on - strand at 721.414 kb on + strand at 721.414 kb on + strand at 721.415 kb on - strand at 721.523 kb on + strand, within AO356_03255 at 721.524 kb on - strand, within AO356_03255 at 721.524 kb on - strand, within AO356_03255 at 721.524 kb on - strand, within AO356_03255 at 721.604 kb on + strand, within AO356_03255 at 721.604 kb on + strand, within AO356_03255 at 721.604 kb on + strand, within AO356_03255 at 721.604 kb on + strand, within AO356_03255 at 721.621 kb on + strand, within AO356_03255 at 721.621 kb on + strand, within AO356_03255 at 721.622 kb on - strand, within AO356_03255 at 721.622 kb on - strand, within AO356_03255 at 721.865 kb on + strand, within AO356_03255 at 721.865 kb on + strand, within AO356_03255 at 721.866 kb on - strand, within AO356_03255 at 721.877 kb on + strand, within AO356_03255 at 721.877 kb on + strand, within AO356_03255 at 721.919 kb on + strand, within AO356_03255 at 721.919 kb on + strand, within AO356_03255 at 721.919 kb on + strand, within AO356_03255 at 721.919 kb on + strand, within AO356_03255 at 721.919 kb on + strand, within AO356_03255 at 721.919 kb on + strand, within AO356_03255 at 721.919 kb on + strand, within AO356_03255 at 721.919 kb on + strand, within AO356_03255 at 721.920 kb on - strand, within AO356_03255 at 721.920 kb on - strand, within AO356_03255 at 721.920 kb on - strand, within AO356_03255 at 721.920 kb on - strand, within AO356_03255 at 721.983 kb on - strand, within AO356_03255 at 722.008 kb on + strand, within AO356_03255 at 722.008 kb on + strand, within AO356_03255 at 722.008 kb on + strand, within AO356_03255 at 722.009 kb on - strand, within AO356_03255 at 722.133 kb on + strand, within AO356_03255 at 722.134 kb on - strand, within AO356_03255
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 75 mM remove 719,873 - AO356_03240 0.34 +1.4 719,873 - AO356_03240 0.34 -0.2 719,873 - AO356_03240 0.34 -0.6 719,873 - AO356_03240 0.34 -0.8 719,878 + AO356_03240 0.35 +0.3 719,879 - AO356_03240 0.35 +0.0 719,986 + AO356_03240 0.57 -0.8 720,038 - AO356_03240 0.67 +0.2 720,175 + +1.4 720,175 + -0.3 720,176 - -1.2 720,176 - +0.7 720,410 - AO356_03245 0.65 -1.1 720,410 - AO356_03245 0.65 -1.3 720,495 + +0.5 720,495 + -0.2 720,495 + -0.2 720,495 + -1.3 720,496 - -0.1 720,496 - +0.5 720,496 - -0.3 720,496 - -0.9 720,496 - -0.2 720,496 - +0.2 720,496 - -0.2 720,616 - +1.1 720,652 + -0.0 720,652 + +0.6 720,652 + -0.1 720,653 - -0.2 720,653 - -0.3 720,653 - +0.8 720,660 + +0.2 720,660 + -0.3 720,684 + -0.2 720,685 - -0.9 720,723 + +0.8 720,736 + -0.8 720,736 + -0.4 720,736 + +0.7 720,737 - -0.6 720,737 - +1.0 720,827 + AO356_03250 0.14 -1.2 720,828 - AO356_03250 0.14 -0.3 720,860 - AO356_03250 0.21 +0.8 721,021 + AO356_03250 0.58 -0.6 721,021 + AO356_03250 0.58 +0.8 721,021 + AO356_03250 0.58 -0.4 721,022 - AO356_03250 0.58 -1.0 721,122 + AO356_03250 0.81 -1.9 721,122 + AO356_03250 0.81 -0.2 721,123 - AO356_03250 0.82 +0.2 721,123 - AO356_03250 0.82 +0.9 721,123 - AO356_03250 0.82 -0.6 721,123 - AO356_03250 0.82 -0.2 721,202 + +1.0 721,202 + -0.7 721,203 - -1.9 721,203 - +0.8 721,203 - -0.6 721,203 - -0.1 721,221 + +0.8 721,221 + -0.1 721,222 - +0.1 721,222 - +0.1 721,222 - +0.5 721,225 - -0.4 721,309 - -0.9 721,370 + +0.1 721,370 + -1.4 721,371 - -1.6 721,371 - -1.0 721,371 - +0.1 721,373 + -1.3 721,374 - +0.3 721,374 - +1.1 721,377 + -0.6 721,377 + +0.6 721,377 + -1.7 721,377 + +0.2 721,377 + -0.2 721,378 - -0.1 721,378 - -1.6 721,386 + -0.5 721,387 - +0.5 721,389 + +0.5 721,389 + +0.4 721,389 + -0.1 721,389 + +1.3 721,390 - +0.3 721,390 - +0.7 721,390 - -0.1 721,390 - +1.4 721,390 - -0.2 721,390 - +0.3 721,394 + -0.9 721,394 + -0.2 721,394 + -0.2 721,394 + +0.2 721,394 + +0.6 721,394 + +0.7 721,395 - +0.2 721,395 - -1.3 721,395 - +1.1 721,395 - -0.2 721,395 - -0.6 721,414 + -0.8 721,414 + -1.1 721,415 - +0.3 721,523 + AO356_03255 0.15 -0.3 721,524 - AO356_03255 0.16 +0.8 721,524 - AO356_03255 0.16 +0.1 721,524 - AO356_03255 0.16 +0.2 721,604 + AO356_03255 0.21 -0.8 721,604 + AO356_03255 0.21 +0.2 721,604 + AO356_03255 0.21 -0.4 721,604 + AO356_03255 0.21 +0.2 721,621 + AO356_03255 0.22 -1.9 721,621 + AO356_03255 0.22 +0.8 721,622 - AO356_03255 0.22 +1.1 721,622 - AO356_03255 0.22 +0.6 721,865 + AO356_03255 0.40 +0.4 721,865 + AO356_03255 0.40 -0.5 721,866 - AO356_03255 0.40 -1.1 721,877 + AO356_03255 0.40 +0.1 721,877 + AO356_03255 0.40 -0.5 721,919 + AO356_03255 0.43 +0.3 721,919 + AO356_03255 0.43 +0.5 721,919 + AO356_03255 0.43 +1.4 721,919 + AO356_03255 0.43 +0.8 721,919 + AO356_03255 0.43 +1.1 721,919 + AO356_03255 0.43 +0.1 721,919 + AO356_03255 0.43 +0.4 721,919 + AO356_03255 0.43 -0.6 721,920 - AO356_03255 0.43 -0.5 721,920 - AO356_03255 0.43 +0.3 721,920 - AO356_03255 0.43 -0.2 721,920 - AO356_03255 0.43 -0.9 721,983 - AO356_03255 0.48 +0.3 722,008 + AO356_03255 0.50 +0.2 722,008 + AO356_03255 0.50 -0.2 722,008 + AO356_03255 0.50 +0.7 722,009 - AO356_03255 0.50 +0.2 722,133 + AO356_03255 0.58 -0.3 722,134 - AO356_03255 0.58 -0.7
Or see this region's nucleotide sequence