Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS14160

Experiment: soil EcoFAB sample 1; outgrowth in LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	soil EcoFAB sample 1; outgrowth in LB
2,990,767	+		ABZR87_RS14155	0.59	+1.2
2,990,768	-		ABZR87_RS14155	0.59	+2.0
2,990,768	-		ABZR87_RS14155	0.59	+2.1
2,990,821	+		ABZR87_RS14155	0.62	+0.7
2,990,821	+		ABZR87_RS14155	0.62	-0.4
2,990,821	+		ABZR87_RS14155	0.62	-0.7
2,990,821	+		ABZR87_RS14155	0.62	-2.3
2,990,822	-		ABZR87_RS14155	0.62	-1.3
2,990,822	-		ABZR87_RS14155	0.62	+0.9
2,990,830	+		ABZR87_RS14155	0.62	-0.3
2,990,830	+		ABZR87_RS14155	0.62	+0.9
2,990,830	+		ABZR87_RS14155	0.62	+0.6
2,990,830	+		ABZR87_RS14155	0.62	-2.7
2,990,830	+		ABZR87_RS14155	0.62	-1.1
2,990,830	+		ABZR87_RS14155	0.62	+0.6
2,990,830	+		ABZR87_RS14155	0.62	-2.7
2,990,830	+		ABZR87_RS14155	0.62	-0.0
2,990,830	+		ABZR87_RS14155	0.62	-2.6
2,990,831	-		ABZR87_RS14155	0.62	-3.5
2,990,831	-		ABZR87_RS14155	0.62	-2.3
2,990,831	-		ABZR87_RS14155	0.62	+1.8
2,990,831	-		ABZR87_RS14155	0.62	+0.3
2,990,831	-		ABZR87_RS14155	0.62	+0.5
2,991,013	+		ABZR87_RS14155	0.72	+0.7
2,991,013	+		ABZR87_RS14155	0.72	+0.4
2,991,193	+		ABZR87_RS14155	0.81	-2.7
2,991,193	+		ABZR87_RS14155	0.81	+1.3
2,991,277	+		ABZR87_RS14155	0.86	-0.0
2,991,277	+		ABZR87_RS14155	0.86	+1.9
2,991,278	-		ABZR87_RS14155	0.86	-1.3
2,991,283	+		ABZR87_RS14155	0.86	-3.8
2,991,283	+		ABZR87_RS14155	0.86	-2.2
2,991,283	+		ABZR87_RS14155	0.86	-2.2
2,991,283	+		ABZR87_RS14155	0.86	-3.3
2,991,284	-		ABZR87_RS14155	0.86	+2.0
2,991,284	-		ABZR87_RS14155	0.86	+1.2
2,991,284	-		ABZR87_RS14155	0.86	+0.6
2,991,284	-		ABZR87_RS14155	0.86	-1.4
2,991,284	-		ABZR87_RS14155	0.86	-2.9
2,991,316	+		ABZR87_RS14155	0.88	+1.0
2,991,316	+		ABZR87_RS14155	0.88	-1.3
2,991,316	+		ABZR87_RS14155	0.88	-0.5
2,991,317	-		ABZR87_RS14155	0.88	-0.1
2,991,317	-		ABZR87_RS14155	0.88	-0.5
2,991,375	+				-0.2
2,991,375	+				-0.3
2,991,375	+				+3.4
2,991,375	+				+1.3
2,991,375	+				+1.8
2,991,375	+				-0.9
2,991,375	+				+0.2
2,991,376	-				+0.5
2,991,376	-				-0.5
2,991,376	-				+0.4
2,991,376	-				-3.3
2,991,376	-				-2.2
2,991,376	-				+0.8
2,991,376	-				-3.7
2,991,376	-				-0.7
2,991,376	-				-0.6
2,991,376	-				-2.2
2,991,376	-				+0.7
2,991,442	+				+1.1
2,991,443	-				-3.2
2,991,443	-				-2.7
2,991,514	+				+1.1
2,991,514	+				+1.3
2,991,514	+				+0.5
2,991,515	-				-1.6
2,991,515	-				-2.0
2,991,515	-				+0.4
2,991,527	-				+1.5
2,991,604	+				-2.4
2,991,604	+				-0.3
2,991,605	-				+1.7
2,991,605	-				+1.3
2,991,623	+				-2.3
2,991,623	+				-0.6
2,991,624	-				-2.4
2,991,624	-				-4.2
2,991,624	-				-1.9
2,991,634	+				-0.5
2,992,267	+		ABZR87_RS14160	0.37	+2.3
2,992,267	+		ABZR87_RS14160	0.37	-0.5
2,992,282	+		ABZR87_RS14160	0.38	+0.8
2,992,282	+		ABZR87_RS14160	0.38	+1.9
2,992,282	+		ABZR87_RS14160	0.38	-3.8
2,992,282	+		ABZR87_RS14160	0.38	+0.6
2,992,282	+		ABZR87_RS14160	0.38	+0.6
2,992,283	-		ABZR87_RS14160	0.38	-1.6
2,992,283	-		ABZR87_RS14160	0.38	+1.9
2,992,428	-		ABZR87_RS14160	0.48	+1.3
2,992,442	+		ABZR87_RS14160	0.48	-0.1
2,992,443	-		ABZR87_RS14160	0.49	+0.3
2,992,456	+		ABZR87_RS14160	0.49	-0.2
2,992,456	+		ABZR87_RS14160	0.49	-1.2
2,992,457	-		ABZR87_RS14160	0.49	-3.2
2,992,457	-		ABZR87_RS14160	0.49	+1.6
2,992,492	+		ABZR87_RS14160	0.52	+2.4
2,992,493	-		ABZR87_RS14160	0.52	-0.7
2,992,493	-		ABZR87_RS14160	0.52	-2.3
2,992,543	+		ABZR87_RS14160	0.55	-1.4
2,992,543	+		ABZR87_RS14160	0.55	+1.0
2,992,543	+		ABZR87_RS14160	0.55	-2.4
2,992,543	+		ABZR87_RS14160	0.55	+0.2
2,992,543	+		ABZR87_RS14160	0.55	+0.9
2,992,543	+		ABZR87_RS14160	0.55	-1.7
2,992,543	+		ABZR87_RS14160	0.55	+0.0
2,992,543	+		ABZR87_RS14160	0.55	+1.0
2,992,543	+		ABZR87_RS14160	0.55	-2.7
2,992,544	-		ABZR87_RS14160	0.55	+2.1
2,992,544	-		ABZR87_RS14160	0.55	+1.4
2,992,544	-		ABZR87_RS14160	0.55	-2.3
2,992,544	-		ABZR87_RS14160	0.55	+1.1
2,992,544	-		ABZR87_RS14160	0.55	+0.1
2,992,544	-		ABZR87_RS14160	0.55	-0.7
2,992,579	+		ABZR87_RS14160	0.57	-2.4
2,992,579	+		ABZR87_RS14160	0.57	+0.5
2,992,649	-		ABZR87_RS14160	0.62	+0.1
2,992,702	+		ABZR87_RS14160	0.65	-1.1
2,992,702	+		ABZR87_RS14160	0.65	-1.5
2,992,702	+		ABZR87_RS14160	0.65	-1.2
2,992,702	+		ABZR87_RS14160	0.65	-2.1
2,992,703	-		ABZR87_RS14160	0.65	+0.2
2,992,703	-		ABZR87_RS14160	0.65	+0.9
2,992,774	+		ABZR87_RS14160	0.70	+1.7
2,992,774	+		ABZR87_RS14160	0.70	-1.7
2,992,774	+		ABZR87_RS14160	0.70	-0.2
2,992,774	+		ABZR87_RS14160	0.70	+1.8
2,992,774	+		ABZR87_RS14160	0.70	+0.8
2,992,774	+		ABZR87_RS14160	0.70	-1.1
2,992,774	+		ABZR87_RS14160	0.70	-2.0
2,992,774	+		ABZR87_RS14160	0.70	-3.2
2,992,775	-		ABZR87_RS14160	0.70	-2.9
2,992,775	-		ABZR87_RS14160	0.70	+0.4
2,992,775	-		ABZR87_RS14160	0.70	+2.4
2,992,775	-		ABZR87_RS14160	0.70	+1.0
2,992,775	-		ABZR87_RS14160	0.70	-0.2
2,992,775	-		ABZR87_RS14160	0.70	-0.5
2,992,775	-		ABZR87_RS14160	0.70	-0.3
2,992,921	+		ABZR87_RS14160	0.79	+1.0
2,992,921	+		ABZR87_RS14160	0.79	-3.8
2,992,922	-		ABZR87_RS14160	0.79	-3.2
2,992,922	-		ABZR87_RS14160	0.79	+0.3
2,992,978	+		ABZR87_RS14160	0.83	+1.2
2,992,978	+		ABZR87_RS14160	0.83	+1.0
2,992,988	+		ABZR87_RS14160	0.84	+0.0
2,993,278	+				-3.7
2,993,278	+				+0.8
2,993,278	+				-1.9
2,993,279	-				-1.5
2,993,279	-				+0.4
2,993,279	-				-0.8
2,993,282	-				+2.8
2,993,282	-				-2.5
2,993,282	-				+0.7
2,993,418	+				-2.8
2,993,418	+				-0.8
2,993,419	-				+1.3
2,993,568	+		ABZR87_RS14165	0.23	+2.8
2,993,569	-		ABZR87_RS14165	0.23	-0.5
2,993,644	+		ABZR87_RS14165	0.32	-1.1
2,993,644	+		ABZR87_RS14165	0.32	+0.8
2,993,644	+		ABZR87_RS14165	0.32	-3.2
2,993,644	+		ABZR87_RS14165	0.32	+0.1
2,993,644	+		ABZR87_RS14165	0.32	-0.5
2,993,645	-		ABZR87_RS14165	0.32	-2.4
2,993,645	-		ABZR87_RS14165	0.32	-3.1
2,993,645	-		ABZR87_RS14165	0.32	-2.3
2,993,645	-		ABZR87_RS14165	0.32	-1.8
2,993,645	-		ABZR87_RS14165	0.32	-0.9
2,993,645	-		ABZR87_RS14165	0.32	+2.1
2,993,645	-		ABZR87_RS14165	0.32	-0.7
2,993,645	-		ABZR87_RS14165	0.32	-1.6
2,993,645	-		ABZR87_RS14165	0.32	-1.5
2,993,659	+		ABZR87_RS14165	0.33	-1.5
2,993,660	-		ABZR87_RS14165	0.33	-1.0
2,993,670	-		ABZR87_RS14165	0.35	+0.5
2,993,762	+		ABZR87_RS14165	0.46	+1.3
2,993,763	-		ABZR87_RS14165	0.46	+0.4
2,993,763	-		ABZR87_RS14165	0.46	-0.9
2,993,763	-		ABZR87_RS14165	0.46	-2.9
2,993,763	-		ABZR87_RS14165	0.46	-3.0
2,993,815	+		ABZR87_RS14165	0.52	+0.9
2,993,816	-		ABZR87_RS14165	0.52	+2.0
2,993,816	-		ABZR87_RS14165	0.52	-2.2
2,993,816	-		ABZR87_RS14165	0.52	-2.6
2,993,816	-		ABZR87_RS14165	0.52	-0.7
2,993,816	-		ABZR87_RS14165	0.52	+0.6
2,993,816	-		ABZR87_RS14165	0.52	+1.2
2,993,834	+		ABZR87_RS14165	0.54	-0.9
2,993,834	+		ABZR87_RS14165	0.54	+0.7
2,993,835	-		ABZR87_RS14165	0.54	+1.2
2,994,039	+		ABZR87_RS14165	0.79	-0.4
2,994,039	+		ABZR87_RS14165	0.79	+0.4
2,994,039	+		ABZR87_RS14165	0.79	-0.6
2,994,040	-		ABZR87_RS14165	0.79	+0.6
2,994,136	-				+0.4
2,994,146	+				-0.1
2,994,146	+				-2.6
2,994,146	+				+0.7
2,994,146	+				+1.0
2,994,146	+				-0.6
2,994,147	-				-3.5
2,994,147	-				-0.3
2,994,147	-				-0.6
2,994,148	+				-1.9
2,994,148	+				+1.1
2,994,148	+				-3.6
2,994,149	-				-2.4
2,994,149	-				+2.0
2,994,149	-				+1.2
2,994,190	-				+0.5
2,994,190	-				+0.3
2,994,190	-				-0.9