Experiment: 6 days starvation 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2982 and DvMF_2983 are separated by 97 nucleotides DvMF_2983 and DvMF_2984 are separated by 176 nucleotides DvMF_2984 and DvMF_2985 are separated by 101 nucleotides
DvMF_2982: DvMF_2982 - SlyX family protein (RefSeq), at 3,755,778 to 3,755,999
_2982
DvMF_2983: DvMF_2983 - protein of unknown function DUF55 (RefSeq), at 3,756,097 to 3,756,564
_2983
DvMF_2984: DvMF_2984 - hypothetical protein (RefSeq), at 3,756,741 to 3,759,431
_2984
DvMF_2985: DvMF_2985 - Radical SAM domain protein (RefSeq), at 3,759,533 to 3,761,848
_2985
Position (kb)
3756
3757
3758
3759
3760 Strain fitness (log2 ratio)
-2
-1
0
1 at 3755.979 kb on + strand at 3756.027 kb on - strand at 3756.238 kb on - strand, within DvMF_2983 at 3756.355 kb on - strand, within DvMF_2983 at 3756.422 kb on - strand, within DvMF_2983 at 3756.422 kb on - strand, within DvMF_2983 at 3756.539 kb on + strand at 3756.616 kb on + strand at 3756.859 kb on - strand at 3756.980 kb on - strand at 3757.096 kb on + strand, within DvMF_2984 at 3757.375 kb on + strand, within DvMF_2984 at 3757.382 kb on + strand, within DvMF_2984 at 3757.488 kb on - strand, within DvMF_2984 at 3757.866 kb on - strand, within DvMF_2984 at 3758.130 kb on - strand, within DvMF_2984 at 3758.260 kb on + strand, within DvMF_2984 at 3758.268 kb on - strand, within DvMF_2984 at 3758.309 kb on + strand, within DvMF_2984 at 3758.477 kb on + strand, within DvMF_2984 at 3758.601 kb on + strand, within DvMF_2984 at 3759.065 kb on + strand, within DvMF_2984 at 3759.073 kb on - strand, within DvMF_2984 at 3759.549 kb on + strand at 3759.640 kb on - strand at 3759.744 kb on + strand at 3759.772 kb on - strand, within DvMF_2985 at 3759.881 kb on - strand, within DvMF_2985 at 3759.890 kb on + strand, within DvMF_2985 at 3760.005 kb on - strand, within DvMF_2985 at 3760.059 kb on - strand, within DvMF_2985 at 3760.141 kb on - strand, within DvMF_2985 at 3760.174 kb on - strand, within DvMF_2985 at 3760.239 kb on + strand, within DvMF_2985 at 3760.348 kb on + strand, within DvMF_2985 at 3760.354 kb on + strand, within DvMF_2985
Per-strain Table
Position Strand Gene LocusTag Fraction 6 days starvation 37C remove 3,755,979 + +0.1 3,756,027 - -0.2 3,756,238 - DvMF_2983 0.30 -1.4 3,756,355 - DvMF_2983 0.55 -0.5 3,756,422 - DvMF_2983 0.69 -0.8 3,756,422 - DvMF_2983 0.69 -1.7 3,756,539 + -0.1 3,756,616 + -1.0 3,756,859 - -1.0 3,756,980 - -1.1 3,757,096 + DvMF_2984 0.13 -1.0 3,757,375 + DvMF_2984 0.24 -1.7 3,757,382 + DvMF_2984 0.24 -0.1 3,757,488 - DvMF_2984 0.28 -1.9 3,757,866 - DvMF_2984 0.42 +0.4 3,758,130 - DvMF_2984 0.52 +0.3 3,758,260 + DvMF_2984 0.56 -0.1 3,758,268 - DvMF_2984 0.57 -0.5 3,758,309 + DvMF_2984 0.58 -0.6 3,758,477 + DvMF_2984 0.65 -0.8 3,758,601 + DvMF_2984 0.69 -0.1 3,759,065 + DvMF_2984 0.86 +0.2 3,759,073 - DvMF_2984 0.87 -1.2 3,759,549 + -1.0 3,759,640 - -1.2 3,759,744 + -0.2 3,759,772 - DvMF_2985 0.10 -0.6 3,759,881 - DvMF_2985 0.15 -2.1 3,759,890 + DvMF_2985 0.15 -0.3 3,760,005 - DvMF_2985 0.20 -1.2 3,760,059 - DvMF_2985 0.23 -0.4 3,760,141 - DvMF_2985 0.26 -1.0 3,760,174 - DvMF_2985 0.28 -0.4 3,760,239 + DvMF_2985 0.30 -1.5 3,760,348 + DvMF_2985 0.35 -0.6 3,760,354 + DvMF_2985 0.35 -0.6
Or see this region's nucleotide sequence