Experiment: 6 days starvation 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2975 and DvMF_2976 are separated by 1 nucleotides DvMF_2976 and DvMF_2977 are separated by 113 nucleotides DvMF_2977 and DvMF_2978 are separated by 177 nucleotides DvMF_2978 and DvMF_2979 are separated by 139 nucleotides
DvMF_2975: DvMF_2975 - nitroreductase (RefSeq), at 3,750,929 to 3,751,438
_2975
DvMF_2976: DvMF_2976 - 4-oxalocrotonate tautomerase (RefSeq), at 3,751,440 to 3,751,628
_2976
DvMF_2977: DvMF_2977 - NADH:flavin oxidoreductase/NADH oxidase (RefSeq), at 3,751,742 to 3,752,860
_2977
DvMF_2978: DvMF_2978 - hypothetical protein (RefSeq), at 3,753,038 to 3,753,370
_2978
DvMF_2979: DvMF_2979 - NADPH-dependent FMN reductase (RefSeq), at 3,753,510 to 3,754,124
_2979
Position (kb)
3751
3752
3753 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3750.993 kb on - strand, within DvMF_2975 at 3751.030 kb on + strand, within DvMF_2975 at 3751.058 kb on - strand, within DvMF_2975 at 3751.223 kb on + strand, within DvMF_2975 at 3751.264 kb on - strand, within DvMF_2975 at 3751.285 kb on - strand, within DvMF_2975 at 3752.360 kb on - strand, within DvMF_2977 at 3752.384 kb on - strand, within DvMF_2977 at 3752.966 kb on - strand at 3752.996 kb on + strand at 3753.151 kb on - strand, within DvMF_2978 at 3753.232 kb on + strand, within DvMF_2978 at 3753.439 kb on - strand at 3753.443 kb on + strand at 3753.564 kb on - strand at 3753.579 kb on - strand, within DvMF_2979 at 3753.701 kb on - strand, within DvMF_2979
Per-strain Table
Position Strand Gene LocusTag Fraction 6 days starvation 37C remove 3,750,993 - DvMF_2975 0.13 -1.6 3,751,030 + DvMF_2975 0.20 -0.9 3,751,058 - DvMF_2975 0.25 -1.0 3,751,223 + DvMF_2975 0.58 -0.4 3,751,264 - DvMF_2975 0.66 -1.4 3,751,285 - DvMF_2975 0.70 -1.4 3,752,360 - DvMF_2977 0.55 -1.9 3,752,384 - DvMF_2977 0.57 -0.8 3,752,966 - -3.1 3,752,996 + -0.9 3,753,151 - DvMF_2978 0.34 -0.3 3,753,232 + DvMF_2978 0.58 -1.0 3,753,439 - -0.4 3,753,443 + +0.4 3,753,564 - -0.7 3,753,579 - DvMF_2979 0.11 -1.2 3,753,701 - DvMF_2979 0.31 -1.1
Or see this region's nucleotide sequence