Experiment: 6 days starvation 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2706 and DvMF_2707 are separated by 277 nucleotides DvMF_2707 and DvMF_2708 are separated by 151 nucleotides
DvMF_2706: DvMF_2706 - glycosyl transferase group 1 (RefSeq), at 3,424,085 to 3,425,206
_2706
DvMF_2707: DvMF_2707 - putative PAS/PAC sensor protein (RefSeq), at 3,425,484 to 3,427,406
_2707
DvMF_2708: DvMF_2708 - membrane protein involved in aromatic hydrocarbon degradation (RefSeq), at 3,427,558 to 3,428,799
_2708
Position (kb)
3425
3426
3427
3428 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3424.509 kb on - strand, within DvMF_2706 at 3424.723 kb on + strand, within DvMF_2706 at 3424.750 kb on - strand, within DvMF_2706 at 3424.868 kb on + strand, within DvMF_2706 at 3425.087 kb on - strand, within DvMF_2706 at 3425.445 kb on - strand at 3425.481 kb on + strand at 3425.489 kb on - strand at 3425.489 kb on - strand at 3425.661 kb on + strand at 3425.751 kb on + strand, within DvMF_2707 at 3425.774 kb on - strand, within DvMF_2707 at 3425.915 kb on + strand, within DvMF_2707 at 3425.924 kb on - strand, within DvMF_2707 at 3425.966 kb on - strand, within DvMF_2707 at 3426.021 kb on + strand, within DvMF_2707 at 3426.454 kb on - strand, within DvMF_2707 at 3426.746 kb on + strand, within DvMF_2707 at 3426.850 kb on - strand, within DvMF_2707 at 3427.391 kb on + strand at 3427.714 kb on + strand, within DvMF_2708 at 3427.898 kb on - strand, within DvMF_2708 at 3428.003 kb on + strand, within DvMF_2708 at 3428.011 kb on - strand, within DvMF_2708 at 3428.045 kb on + strand, within DvMF_2708 at 3428.230 kb on - strand, within DvMF_2708 at 3428.391 kb on - strand, within DvMF_2708 at 3428.391 kb on - strand, within DvMF_2708
Per-strain Table
Position Strand Gene LocusTag Fraction 6 days starvation 37C remove 3,424,509 - DvMF_2706 0.38 -2.8 3,424,723 + DvMF_2706 0.57 -4.6 3,424,750 - DvMF_2706 0.59 -3.8 3,424,868 + DvMF_2706 0.70 -2.0 3,425,087 - DvMF_2706 0.89 -0.3 3,425,445 - -1.0 3,425,481 + -0.0 3,425,489 - -1.7 3,425,489 - -0.3 3,425,661 + -2.1 3,425,751 + DvMF_2707 0.14 -1.8 3,425,774 - DvMF_2707 0.15 -2.5 3,425,915 + DvMF_2707 0.22 -2.1 3,425,924 - DvMF_2707 0.23 -1.8 3,425,966 - DvMF_2707 0.25 -2.1 3,426,021 + DvMF_2707 0.28 -1.9 3,426,454 - DvMF_2707 0.50 -2.1 3,426,746 + DvMF_2707 0.66 -1.8 3,426,850 - DvMF_2707 0.71 -2.3 3,427,391 + -4.0 3,427,714 + DvMF_2708 0.13 -0.5 3,427,898 - DvMF_2708 0.27 -1.9 3,428,003 + DvMF_2708 0.36 -0.9 3,428,011 - DvMF_2708 0.36 -2.1 3,428,045 + DvMF_2708 0.39 -0.5 3,428,230 - DvMF_2708 0.54 -0.2 3,428,391 - DvMF_2708 0.67 -0.1 3,428,391 - DvMF_2708 0.67 -0.7
Or see this region's nucleotide sequence