Experiment: 6 days starvation 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2622 and DvMF_2623 are separated by 256 nucleotides DvMF_2623 and DvMF_2624 are separated by 346 nucleotides
DvMF_2622: DvMF_2622 - nitrogenase cofactor biosynthesis protein NifB (RefSeq), at 3,312,435 to 3,313,718
_2622
DvMF_2623: DvMF_2623 - Rhodanese domain protein (RefSeq), at 3,313,975 to 3,314,430
_2623
DvMF_2624: DvMF_2624 - acetolactate synthase, small subunit (RefSeq), at 3,314,777 to 3,315,259
_2624
Position (kb)
3313
3314
3315 Strain fitness (log2 ratio)
-1
0
1 at 3312.976 kb on + strand, within DvMF_2622 at 3312.976 kb on + strand, within DvMF_2622 at 3312.976 kb on + strand, within DvMF_2622 at 3312.976 kb on + strand, within DvMF_2622 at 3312.984 kb on - strand, within DvMF_2622 at 3313.004 kb on + strand, within DvMF_2622 at 3313.082 kb on - strand, within DvMF_2622 at 3313.415 kb on - strand, within DvMF_2622 at 3313.439 kb on - strand, within DvMF_2622 at 3313.486 kb on + strand, within DvMF_2622 at 3313.486 kb on + strand, within DvMF_2622 at 3313.494 kb on - strand, within DvMF_2622 at 3314.042 kb on - strand, within DvMF_2623 at 3314.335 kb on + strand, within DvMF_2623 at 3314.478 kb on - strand at 3314.547 kb on - strand at 3314.547 kb on - strand at 3315.001 kb on - strand, within DvMF_2624 at 3315.040 kb on + strand, within DvMF_2624 at 3315.227 kb on - strand at 3315.353 kb on + strand at 3315.353 kb on + strand at 3315.383 kb on + strand at 3315.420 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 6 days starvation 37C remove 3,312,976 + DvMF_2622 0.42 -0.6 3,312,976 + DvMF_2622 0.42 -0.7 3,312,976 + DvMF_2622 0.42 -0.1 3,312,976 + DvMF_2622 0.42 -0.4 3,312,984 - DvMF_2622 0.43 -0.3 3,313,004 + DvMF_2622 0.44 -0.5 3,313,082 - DvMF_2622 0.50 -0.1 3,313,415 - DvMF_2622 0.76 -1.4 3,313,439 - DvMF_2622 0.78 -0.3 3,313,486 + DvMF_2622 0.82 -0.2 3,313,486 + DvMF_2622 0.82 +0.2 3,313,494 - DvMF_2622 0.82 -0.1 3,314,042 - DvMF_2623 0.15 -0.4 3,314,335 + DvMF_2623 0.79 -0.3 3,314,478 - +0.4 3,314,547 - -0.3 3,314,547 - -0.5 3,315,001 - DvMF_2624 0.46 +0.3 3,315,040 + DvMF_2624 0.54 -0.7 3,315,227 - -0.1 3,315,353 + -0.9 3,315,353 + +0.0 3,315,383 + -1.6 3,315,420 + -0.9
Or see this region's nucleotide sequence