Experiment: 6 days starvation 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2265 and DvMF_2266 are separated by 184 nucleotides DvMF_2266 and DvMF_2267 overlap by 1 nucleotides
DvMF_2265: DvMF_2265 - transcriptional regulator, MarR family (RefSeq), at 2,845,697 to 2,846,587
_2265
DvMF_2266: DvMF_2266 - putative lipoprotein (RefSeq), at 2,846,772 to 2,848,310
_2266
DvMF_2267: DvMF_2267 - peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin (RefSeq), at 2,848,310 to 2,849,344
_2267
Position (kb)
2846
2847
2848
2849 Strain fitness (log2 ratio)
-2
-1
0
1 at 2845.952 kb on + strand, within DvMF_2265 at 2845.952 kb on + strand, within DvMF_2265 at 2845.971 kb on - strand, within DvMF_2265 at 2847.030 kb on + strand, within DvMF_2266 at 2847.042 kb on + strand, within DvMF_2266 at 2847.103 kb on - strand, within DvMF_2266 at 2847.283 kb on - strand, within DvMF_2266 at 2847.601 kb on + strand, within DvMF_2266 at 2847.609 kb on - strand, within DvMF_2266 at 2847.688 kb on - strand, within DvMF_2266 at 2847.777 kb on + strand, within DvMF_2266 at 2847.839 kb on + strand, within DvMF_2266 at 2847.839 kb on + strand, within DvMF_2266 at 2847.850 kb on + strand, within DvMF_2266 at 2847.850 kb on + strand, within DvMF_2266 at 2847.858 kb on - strand, within DvMF_2266 at 2848.164 kb on - strand at 2848.243 kb on + strand at 2848.277 kb on + strand at 2848.297 kb on + strand at 2848.381 kb on + strand at 2848.471 kb on - strand, within DvMF_2267 at 2848.603 kb on + strand, within DvMF_2267 at 2848.675 kb on + strand, within DvMF_2267 at 2848.683 kb on - strand, within DvMF_2267 at 2848.694 kb on + strand, within DvMF_2267 at 2848.711 kb on - strand, within DvMF_2267 at 2848.711 kb on - strand, within DvMF_2267 at 2848.785 kb on + strand, within DvMF_2267 at 2848.785 kb on + strand, within DvMF_2267 at 2849.223 kb on - strand, within DvMF_2267
Per-strain Table
Position Strand Gene LocusTag Fraction 6 days starvation 37C remove 2,845,952 + DvMF_2265 0.29 +1.2 2,845,952 + DvMF_2265 0.29 -0.1 2,845,971 - DvMF_2265 0.31 -1.8 2,847,030 + DvMF_2266 0.17 -0.2 2,847,042 + DvMF_2266 0.18 -0.7 2,847,103 - DvMF_2266 0.22 -0.5 2,847,283 - DvMF_2266 0.33 -0.7 2,847,601 + DvMF_2266 0.54 -0.9 2,847,609 - DvMF_2266 0.54 -1.2 2,847,688 - DvMF_2266 0.60 -0.0 2,847,777 + DvMF_2266 0.65 +0.2 2,847,839 + DvMF_2266 0.69 -0.2 2,847,839 + DvMF_2266 0.69 -0.0 2,847,850 + DvMF_2266 0.70 -1.4 2,847,850 + DvMF_2266 0.70 -0.2 2,847,858 - DvMF_2266 0.71 +0.1 2,848,164 - +0.2 2,848,243 + +0.5 2,848,277 + -0.3 2,848,297 + -0.5 2,848,381 + +0.1 2,848,471 - DvMF_2267 0.16 +0.2 2,848,603 + DvMF_2267 0.28 +0.3 2,848,675 + DvMF_2267 0.35 -1.4 2,848,683 - DvMF_2267 0.36 -0.5 2,848,694 + DvMF_2267 0.37 -0.6 2,848,711 - DvMF_2267 0.39 -0.3 2,848,711 - DvMF_2267 0.39 -0.6 2,848,785 + DvMF_2267 0.46 -0.4 2,848,785 + DvMF_2267 0.46 +0.3 2,849,223 - DvMF_2267 0.88 -0.6
Or see this region's nucleotide sequence