Experiment: 6 days starvation 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1483 and DvMF_1484 are separated by 397 nucleotides DvMF_1484 and DvMF_1485 are separated by 303 nucleotides
DvMF_1483: DvMF_1483 - inner-membrane translocator (RefSeq), at 1,817,023 to 1,817,910
_1483
DvMF_1484: DvMF_1484 - Nitrate reductase (RefSeq), at 1,818,308 to 1,820,527
_1484
DvMF_1485: DvMF_1485 - glutaminyl-tRNA synthetase (RefSeq), at 1,820,831 to 1,822,540
_1485
Position (kb)
1818
1819
1820
1821 Strain fitness (log2 ratio)
-2
-1
0
1 at 1817.465 kb on + strand, within DvMF_1483 at 1817.535 kb on + strand, within DvMF_1483 at 1817.551 kb on + strand, within DvMF_1483 at 1817.662 kb on - strand, within DvMF_1483 at 1817.838 kb on - strand at 1817.848 kb on - strand at 1817.878 kb on - strand at 1817.953 kb on + strand at 1818.139 kb on + strand at 1818.185 kb on - strand at 1818.228 kb on - strand at 1818.511 kb on - strand at 1818.530 kb on + strand, within DvMF_1484 at 1818.582 kb on - strand, within DvMF_1484 at 1818.652 kb on - strand, within DvMF_1484 at 1818.822 kb on - strand, within DvMF_1484 at 1819.034 kb on - strand, within DvMF_1484 at 1819.195 kb on - strand, within DvMF_1484 at 1819.242 kb on + strand, within DvMF_1484 at 1819.274 kb on + strand, within DvMF_1484 at 1819.324 kb on + strand, within DvMF_1484 at 1819.430 kb on + strand, within DvMF_1484 at 1819.574 kb on - strand, within DvMF_1484 at 1819.581 kb on + strand, within DvMF_1484 at 1819.637 kb on + strand, within DvMF_1484 at 1819.716 kb on + strand, within DvMF_1484 at 1819.758 kb on - strand, within DvMF_1484 at 1819.870 kb on - strand, within DvMF_1484 at 1819.897 kb on - strand, within DvMF_1484 at 1819.990 kb on + strand, within DvMF_1484 at 1820.021 kb on - strand, within DvMF_1484 at 1820.123 kb on - strand, within DvMF_1484 at 1820.150 kb on + strand, within DvMF_1484 at 1820.158 kb on - strand, within DvMF_1484 at 1820.247 kb on + strand, within DvMF_1484 at 1820.247 kb on + strand, within DvMF_1484 at 1820.449 kb on + strand at 1820.586 kb on - strand at 1820.703 kb on - strand at 1820.747 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 6 days starvation 37C remove 1,817,465 + DvMF_1483 0.50 -0.4 1,817,535 + DvMF_1483 0.58 +0.1 1,817,551 + DvMF_1483 0.59 -2.0 1,817,662 - DvMF_1483 0.72 +0.2 1,817,838 - +1.4 1,817,848 - -1.0 1,817,878 - -0.6 1,817,953 + -0.5 1,818,139 + -1.2 1,818,185 - -0.0 1,818,228 - +0.2 1,818,511 - +0.8 1,818,530 + DvMF_1484 0.10 -0.4 1,818,582 - DvMF_1484 0.12 -0.5 1,818,652 - DvMF_1484 0.15 -1.6 1,818,822 - DvMF_1484 0.23 -0.6 1,819,034 - DvMF_1484 0.33 -0.3 1,819,195 - DvMF_1484 0.40 -0.5 1,819,242 + DvMF_1484 0.42 -0.6 1,819,274 + DvMF_1484 0.44 +0.3 1,819,324 + DvMF_1484 0.46 +0.8 1,819,430 + DvMF_1484 0.51 -0.5 1,819,574 - DvMF_1484 0.57 -1.3 1,819,581 + DvMF_1484 0.57 +0.2 1,819,637 + DvMF_1484 0.60 -0.8 1,819,716 + DvMF_1484 0.63 -0.0 1,819,758 - DvMF_1484 0.65 -0.2 1,819,870 - DvMF_1484 0.70 -0.7 1,819,897 - DvMF_1484 0.72 +0.2 1,819,990 + DvMF_1484 0.76 +0.0 1,820,021 - DvMF_1484 0.77 +0.8 1,820,123 - DvMF_1484 0.82 +0.1 1,820,150 + DvMF_1484 0.83 -1.2 1,820,158 - DvMF_1484 0.83 -0.9 1,820,247 + DvMF_1484 0.87 +0.5 1,820,247 + DvMF_1484 0.87 +0.4 1,820,449 + -0.4 1,820,586 - -1.1 1,820,703 - -0.8 1,820,747 + -0.7
Or see this region's nucleotide sequence