Experiment: m.b. copper (II) chloride 0.64 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0665 and Dshi_0666 overlap by 4 nucleotides Dshi_0666 and Dshi_0667 are separated by 1 nucleotides Dshi_0667 and Dshi_0668 are separated by 4 nucleotides Dshi_0668 and Dshi_0669 are separated by 87 nucleotides
Dshi_0665: Dshi_0665 - Cytochrome c oxidase cbb3 type accessory protein FixG (RefSeq), at 669,212 to 670,654
_0665
Dshi_0666: Dshi_0666 - FixH family protein (RefSeq), at 670,651 to 671,118
_0666
Dshi_0667: Dshi_0667 - heavy metal translocating P-type ATPase (RefSeq), at 671,120 to 673,309
_0667
Dshi_0668: Dshi_0668 - cytochrome oxidase maturation protein, cbb3-type (RefSeq), at 673,314 to 673,472
_0668
Dshi_0669: Dshi_0669 - Serine-type D-Ala-D-Ala carboxypeptidase (RefSeq), at 673,560 to 675,041
_0669
Position (kb) 671
672
673
674 Strain fitness (log2 ratio) -2
-1
0
1
2 at 670.148 kb on - strand, within Dshi_0665 at 670.166 kb on - strand, within Dshi_0665 at 670.267 kb on - strand, within Dshi_0665 at 670.328 kb on + strand, within Dshi_0665 at 670.411 kb on + strand, within Dshi_0665 at 670.542 kb on + strand at 670.550 kb on - strand at 670.550 kb on - strand at 670.730 kb on + strand, within Dshi_0666 at 670.829 kb on + strand, within Dshi_0666 at 670.832 kb on + strand, within Dshi_0666 at 670.837 kb on - strand, within Dshi_0666 at 670.853 kb on - strand, within Dshi_0666 at 671.000 kb on + strand, within Dshi_0666 at 671.251 kb on + strand at 671.392 kb on + strand, within Dshi_0667 at 671.470 kb on - strand, within Dshi_0667 at 671.525 kb on - strand, within Dshi_0667 at 671.663 kb on - strand, within Dshi_0667 at 671.862 kb on + strand, within Dshi_0667 at 671.920 kb on + strand, within Dshi_0667 at 672.005 kb on - strand, within Dshi_0667 at 672.013 kb on - strand, within Dshi_0667 at 672.085 kb on - strand, within Dshi_0667 at 672.260 kb on + strand, within Dshi_0667 at 672.328 kb on - strand, within Dshi_0667 at 672.986 kb on - strand, within Dshi_0667 at 673.338 kb on - strand, within Dshi_0668 at 673.345 kb on + strand, within Dshi_0668 at 673.345 kb on + strand, within Dshi_0668 at 673.588 kb on + strand at 673.919 kb on - strand, within Dshi_0669
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.64 mM remove 670,148 - Dshi_0665 0.65 +0.3 670,166 - Dshi_0665 0.66 -0.7 670,267 - Dshi_0665 0.73 +1.7 670,328 + Dshi_0665 0.77 +1.4 670,411 + Dshi_0665 0.83 -0.1 670,542 + +0.4 670,550 - +1.4 670,550 - +0.7 670,730 + Dshi_0666 0.17 -0.1 670,829 + Dshi_0666 0.38 +2.2 670,832 + Dshi_0666 0.39 +0.5 670,837 - Dshi_0666 0.40 +1.6 670,853 - Dshi_0666 0.43 +0.6 671,000 + Dshi_0666 0.75 +0.0 671,251 + +0.4 671,392 + Dshi_0667 0.12 +1.3 671,470 - Dshi_0667 0.16 +0.6 671,525 - Dshi_0667 0.18 -1.5 671,663 - Dshi_0667 0.25 +0.7 671,862 + Dshi_0667 0.34 +1.2 671,920 + Dshi_0667 0.37 +0.0 672,005 - Dshi_0667 0.40 -1.4 672,013 - Dshi_0667 0.41 +0.7 672,085 - Dshi_0667 0.44 +0.9 672,260 + Dshi_0667 0.52 +1.6 672,328 - Dshi_0667 0.55 +0.6 672,986 - Dshi_0667 0.85 +1.1 673,338 - Dshi_0668 0.15 +1.2 673,345 + Dshi_0668 0.19 +0.2 673,345 + Dshi_0668 0.19 +0.6 673,588 + -0.4 673,919 - Dshi_0669 0.24 -2.2
Or see this region's nucleotide sequence