Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4478

Experiment: BHIS with Cephalothin 0.625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Cephalothin 0.625 mg/ml
5,890,489	+				+0.8
5,890,489	+				-1.9
5,890,561	-				-0.3
5,890,561	-				+2.0
5,890,572	-				+0.3
5,890,572	-				+0.7
5,890,572	-				-0.1
5,890,600	+				-0.6
5,890,600	+				-1.1
5,890,631	+				+1.0
5,890,633	+				-2.2
5,890,634	-				-0.4
5,890,634	-				-1.4
5,890,823	+		BT4477	0.29	+1.7
5,890,893	+		BT4477	0.40	-0.9
5,890,893	+		BT4477	0.40	-1.3
5,890,941	+		BT4477	0.47	-1.8
5,891,014	+		BT4477	0.58	-1.1
5,891,014	+		BT4477	0.58	+2.1
5,891,098	-		BT4477	0.71	+0.4
5,891,250	-				+0.7
5,891,676	-		BT4478	0.71	-0.6
5,891,679	+		BT4478	0.72	-3.5
5,891,682	-		BT4478	0.73	-0.6
5,891,739	-				-1.6
5,891,739	-				+0.4
5,891,847	-				+1.5
5,891,992	+				+1.0
5,892,004	-				-1.8
5,892,118	-				-1.4
5,892,259	+				+1.2
5,892,336	-				-0.5
5,892,356	-				+0.4
5,892,376	-				+1.4
5,892,378	-				-0.7
5,892,384	-				+1.8
5,892,387	-				-0.6
5,892,395	-				+0.4
5,892,435	-				+0.4
5,892,480	-				+1.0
5,892,556	+				+0.6
5,892,621	-		BT4479	0.17	-0.7
5,892,621	-		BT4479	0.17	+0.9