Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3947

Experiment: BHIS with Cephalothin 0.625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Cephalothin 0.625 mg/ml
5,121,951	+				-1.6
5,121,951	+				-0.4
5,121,951	+				+0.3
5,122,633	+				-0.3
5,122,641	+				-0.4
5,122,647	+				-0.0
5,122,647	+				-2.4
5,122,647	+				-1.9
5,122,647	+				-2.1
5,122,650	-				-0.6
5,122,730	+				-0.3
5,122,774	-				-0.4
5,122,814	-				-1.7
5,122,961	+		BT3947	0.16	+1.7
5,122,973	+		BT3947	0.17	-1.0
5,122,974	-		BT3947	0.17	+1.1
5,122,999	+		BT3947	0.18	+1.1
5,123,029	-		BT3947	0.20	+1.5
5,123,081	-		BT3947	0.22	-0.8
5,123,087	-		BT3947	0.22	-1.4
5,123,087	-		BT3947	0.22	+2.3
5,123,245	-		BT3947	0.30	+0.4
5,123,245	-		BT3947	0.30	-0.5
5,123,470	+		BT3947	0.41	-1.8
5,123,470	-		BT3947	0.41	+0.2
5,123,471	-		BT3947	0.41	+3.2
5,123,567	-		BT3947	0.45	-1.0
5,123,583	-		BT3947	0.46	+1.3
5,123,640	-		BT3947	0.49	+0.2
5,123,725	+		BT3947	0.53	+1.6
5,123,758	-				+1.1
5,123,793	+		BT3947	0.56	-0.9
5,123,793	+		BT3947	0.56	+0.3
5,123,816	-		BT3947	0.57	+0.9
5,123,860	-		BT3947	0.59	-1.0
5,123,895	-		BT3947	0.61	+0.6
5,123,899	+		BT3947	0.61	+1.1
5,123,903	-		BT3947	0.61	+1.1
5,123,909	-		BT3947	0.61	+0.3
5,124,105	+		BT3947	0.71	-0.5
5,124,105	+		BT3947	0.71	+1.1
5,124,105	+		BT3947	0.71	-1.4
5,124,249	+		BT3947	0.78	-0.5
5,124,282	-		BT3947	0.79	-0.5
5,124,333	-		BT3947	0.82	+0.5
5,124,395	-		BT3947	0.85	-0.2
5,124,474	-		BT3947	0.88	+1.6
5,124,525	-				-0.8
5,124,525	-				-2.6
5,124,532	-				+1.2
5,124,537	+				+1.1
5,124,541	+				-0.8
5,124,542	-				+2.4
5,124,553	-				-1.1
5,124,554	+				-0.9
5,124,656	+				-2.3
5,124,678	-				-0.7