Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1494

Experiment: BHIS with Cephalothin 0.625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Cephalothin 0.625 mg/ml
1,842,708	+		BT1492	0.60	+2.4
1,842,708	+		BT1492	0.60	-0.4
1,842,709	-		BT1492	0.60	-0.5
1,842,748	-		BT1492	0.62	-2.0
1,842,748	-		BT1492	0.62	+1.9
1,842,751	+		BT1492	0.63	+0.2
1,842,840	-		BT1492	0.69	+1.2
1,842,850	+		BT1492	0.70	-1.4
1,842,855	+		BT1492	0.70	-1.5
1,842,856	-		BT1492	0.70	-1.8
1,843,013	-		BT1492	0.82	-1.2
1,843,032	+		BT1492	0.83	+1.1
1,843,033	-		BT1492	0.83	+0.4
1,843,033	-		BT1492	0.83	-0.8
1,843,091	-		BT1492	0.87	-1.4
1,843,121	+		BT1492	0.89	-0.1
1,843,121	+		BT1492	0.89	+1.8
1,843,122	-		BT1492	0.90	-0.6
1,843,271	-				+2.2
1,843,298	-				-1.5
1,843,344	+				-1.9
1,843,368	+				-2.6
1,843,368	+				-3.0
1,843,369	-				+0.2
1,843,369	-				-0.8
1,843,390	-				+0.9
1,843,459	+		BT1493	0.28	-0.2
1,843,459	+		BT1493	0.28	-3.0
1,843,459	+		BT1493	0.28	-0.1
1,843,494	-		BT1493	0.39	-1.1
1,843,610	+		BT1493	0.78	-1.4
1,843,618	+		BT1493	0.80	+0.5
1,843,619	-		BT1493	0.81	-0.9
1,843,627	-		BT1493	0.83	-0.1
1,843,653	-				-2.0
1,843,672	-				-0.4
1,843,676	-				-0.2
1,843,682	-				-0.3
1,843,682	-				+1.2
1,843,721	-		BT1494	0.16	-0.6
1,843,768	+		BT1494	0.36	+1.4
1,843,788	+		BT1494	0.45	+0.2
1,843,830	-		BT1494	0.64	+1.0
1,843,843	+		BT1494	0.70	+1.2
1,843,843	+		BT1494	0.70	+0.8
1,843,905	-				-0.8
1,843,918	+				-1.9
1,843,953	-				-1.4
1,843,964	-				-0.1
1,843,969	+				+1.3
1,843,969	+				-0.0
1,843,992	-				-0.7
1,844,682	-				+0.5