Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1438

Experiment: BHIS with Cephalothin 0.625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Cephalothin 0.625 mg/ml
1,766,917	-				+0.8
1,766,949	+				+0.9
1,767,000	+				-1.4
1,767,050	-				-0.2
1,767,115	+		BT1437	0.19	+0.2
1,767,214	+		BT1437	0.28	-1.4
1,767,214	+		BT1437	0.28	-2.1
1,767,445	+		BT1437	0.48	+1.0
1,767,446	-		BT1437	0.49	-1.2
1,767,508	-		BT1437	0.54	+1.6
1,767,589	+		BT1437	0.61	-0.2
1,767,590	-		BT1437	0.61	-3.2
1,767,595	-		BT1437	0.62	-0.2
1,767,598	+		BT1437	0.62	+0.8
1,767,674	-		BT1437	0.69	-0.9
1,767,693	-		BT1437	0.70	-0.6
1,767,731	-		BT1437	0.74	+0.8
1,767,848	+		BT1437	0.84	+0.8
1,767,869	-		BT1437	0.86	-1.0
1,767,869	-		BT1437	0.86	+0.3
1,768,012	+				+0.6
1,768,034	+				-3.2
1,768,056	-				-1.4
1,768,080	+		BT1438	0.11	-0.7
1,768,120	-		BT1438	0.14	-3.8
1,768,123	+		BT1438	0.15	-0.7
1,768,126	+		BT1438	0.15	-2.2
1,768,126	+		BT1438	0.15	-0.2
1,768,375	-		BT1438	0.32	-1.7
1,768,436	+		BT1438	0.37	-4.2
1,768,806	+		BT1438	0.63	+0.4
1,768,807	-		BT1438	0.63	-2.1
1,768,843	+		BT1438	0.65	+0.5
1,768,930	+		BT1438	0.71	-2.4
1,768,982	-		BT1438	0.75	-0.6
1,768,982	-		BT1438	0.75	-1.7
1,769,079	+		BT1438	0.82	-0.2
1,769,121	-		BT1438	0.85	-2.3
1,769,149	-		BT1438	0.87	-0.1
1,769,222	-				+0.8
1,769,255	-				+0.8
1,769,270	-				-0.6
1,769,366	-				+1.4
1,769,366	-				-2.7
1,769,423	-				-0.8
1,769,435	-				-0.2
1,769,458	-				-0.0
1,769,458	-				+1.0
1,769,458	-				-0.2
1,769,464	-				+1.0
1,769,585	-		BT1439	0.12	-0.2
1,769,624	-		BT1439	0.14	-0.5
1,769,630	+		BT1439	0.15	+1.8
1,769,631	-		BT1439	0.15	+1.3
1,769,631	-		BT1439	0.15	+0.5
1,769,640	-		BT1439	0.15	-0.8
1,769,728	-		BT1439	0.21	-0.7
1,769,732	-		BT1439	0.21	-1.5
1,769,735	+		BT1439	0.22	-2.1
1,769,735	+		BT1439	0.22	+0.0
1,769,864	-		BT1439	0.30	-1.0
1,769,893	-		BT1439	0.32	-1.5
1,769,902	-		BT1439	0.33	-2.6
1,769,902	-		BT1439	0.33	-1.6
1,769,956	+		BT1439	0.37	+0.8
1,769,987	-		BT1439	0.39	-0.5
1,769,991	+		BT1439	0.39	+0.8
1,769,992	-		BT1439	0.39	+0.4
1,769,992	-		BT1439	0.39	-0.6
1,769,992	-		BT1439	0.39	-0.7
1,770,004	-		BT1439	0.40	-1.2
1,770,018	+		BT1439	0.41	-1.7
1,770,082	+		BT1439	0.45	-1.0
1,770,122	-		BT1439	0.48	-0.8
1,770,192	-		BT1439	0.52	+1.8
1,770,196	-		BT1439	0.53	-1.1
1,770,196	-		BT1439	0.53	+1.2
1,770,231	+		BT1439	0.55	+2.7
1,770,280	-		BT1439	0.58	+0.8
1,770,319	-		BT1439	0.61	-1.0
1,770,319	-		BT1439	0.61	+0.9