Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1208

Experiment: BHIS with Cephalothin 0.625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Cephalothin 0.625 mg/ml
1,503,630	+		BT1207	0.21	-1.1
1,503,690	+		BT1207	0.27	-2.2
1,503,691	-		BT1207	0.28	-1.8
1,503,694	-		BT1207	0.28	+0.7
1,503,705	+		BT1207	0.29	+1.4
1,503,717	+		BT1207	0.30	-0.3
1,503,776	+		BT1207	0.36	-1.3
1,503,819	+		BT1207	0.41	-1.0
1,503,904	+		BT1207	0.50	-0.6
1,503,907	-		BT1207	0.50	-1.0
1,503,909	+		BT1207	0.50	+0.3
1,503,910	-		BT1207	0.50	+1.2
1,504,118	+		BT1207	0.72	-1.3
1,504,270	-		BT1207	0.88	-0.2
1,504,321	-				-0.1
1,504,346	-				-0.3
1,504,346	-				+0.9
1,504,390	-				-0.8
1,504,444	+				+1.2
1,504,445	-				-0.3
1,504,445	-				+0.5
1,504,452	-				-0.7
1,504,483	-				-0.1
1,504,492	-				-0.3
1,504,494	+				+0.6
1,504,494	+				-0.6
1,504,649	+		BT1208	0.36	+0.7
1,504,708	+		BT1208	0.52	-0.8
1,504,708	+		BT1208	0.52	-1.3
1,504,715	-		BT1208	0.54	-1.5
1,504,725	+		BT1208	0.56	-3.3
1,504,754	-		BT1208	0.64	-2.3
1,504,772	-		BT1208	0.69	+3.0
1,504,834	-		BT1208	0.85	-0.8
1,504,880	-				+0.7
1,504,900	-				-2.3
1,504,927	+				+0.3
1,504,939	+				-2.2
1,504,941	+				-1.7
1,504,941	+				-1.6
1,504,942	-				-0.8
1,504,946	-				-0.9
1,504,964	+				+2.1
1,504,995	+				-1.7
1,505,050	+				+0.1
1,505,062	+				+0.5
1,505,122	-				-1.1
1,505,142	+				+0.0
1,505,143	-				-0.6
1,505,143	-				-0.8
1,505,144	+				+0.2
1,505,170	-				-0.3
1,505,177	+				-3.1
1,505,196	+		BT1209	0.11	+0.9
1,505,250	-		BT1209	0.16	-2.3
1,505,259	-		BT1209	0.17	+1.2
1,505,275	-		BT1209	0.18	-0.5
1,505,317	-		BT1209	0.22	-0.3
1,505,317	-		BT1209	0.22	+0.5
1,505,317	-		BT1209	0.22	-1.2
1,505,317	-		BT1209	0.22	-1.3
1,505,320	+		BT1209	0.22	-0.9
1,505,392	+		BT1209	0.29	-0.5
1,505,392	+		BT1209	0.29	-2.3
1,505,393	-		BT1209	0.29	+1.6
1,505,396	-		BT1209	0.29	+1.5
1,505,450	+		BT1209	0.34	+1.7
1,505,454	+		BT1209	0.34	-0.3
1,505,454	+		BT1209	0.34	-3.3
1,505,457	-		BT1209	0.34	-1.7
1,505,466	+		BT1209	0.35	-2.3
1,505,467	-		BT1209	0.35	-3.2
1,505,467	-		BT1209	0.35	-0.3
1,505,467	-		BT1209	0.35	-2.9
1,505,517	+		BT1209	0.40	-1.3
1,505,518	-		BT1209	0.40	+0.3
1,505,525	-		BT1209	0.40	+0.7
1,505,557	-		BT1209	0.43	-1.0
1,505,563	-		BT1209	0.44	+0.8
1,505,587	-		BT1209	0.46	-2.7
1,505,610	+		BT1209	0.48	+0.2
1,505,610	+				-0.9
1,505,685	+		BT1209	0.54	+1.3
1,505,686	-		BT1209	0.54	-1.4
1,505,686	-		BT1209	0.54	+1.3
1,505,727	+		BT1209	0.58	+0.4
1,505,743	-		BT1209	0.59	-0.2
1,505,766	+		BT1209	0.61	+0.5
1,505,831	-		BT1209	0.67	-0.2