Experiment: H2 N-free with 2mM Adenosine
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MMJJ_RS06025 and MMJJ_RS06030 are separated by 19 nucleotides MMJJ_RS06030 and MMJJ_RS06035 are separated by 9 nucleotides MMJJ_RS06035 and MMJJ_RS06040 are separated by 10 nucleotides
MMJJ_RS06025: MMJJ_RS06025 - 4Fe-4S binding protein, at 1,119,489 to 1,120,934
_RS06025
MMJJ_RS06030: MMJJ_RS06030 - 4Fe-4S binding protein, at 1,120,954 to 1,121,466
_RS06030
MMJJ_RS06035: MMJJ_RS06035 - NADH-quinone oxidoreductase subunit B family protein, at 1,121,476 to 1,121,919
_RS06035
MMJJ_RS06040: MMJJ_RS06040 - NADH-quinone oxidoreductase subunit H, at 1,121,930 to 1,122,925
_RS06040
Position (kb) 1120
1121
1122 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 1119.967 kb on - strand, within MMJJ_RS06025 at 1119.977 kb on + strand, within MMJJ_RS06025 at 1120.034 kb on + strand, within MMJJ_RS06025 at 1120.053 kb on - strand, within MMJJ_RS06025 at 1120.053 kb on - strand, within MMJJ_RS06025 at 1120.053 kb on - strand, within MMJJ_RS06025 at 1120.054 kb on + strand, within MMJJ_RS06025 at 1120.054 kb on + strand, within MMJJ_RS06025 at 1120.057 kb on - strand, within MMJJ_RS06025 at 1120.057 kb on - strand, within MMJJ_RS06025 at 1120.057 kb on - strand, within MMJJ_RS06025 at 1120.057 kb on - strand, within MMJJ_RS06025 at 1120.057 kb on - strand, within MMJJ_RS06025 at 1120.058 kb on + strand, within MMJJ_RS06025 at 1120.058 kb on + strand, within MMJJ_RS06025 at 1120.058 kb on + strand, within MMJJ_RS06025 at 1120.058 kb on + strand, within MMJJ_RS06025 at 1120.058 kb on + strand, within MMJJ_RS06025 at 1120.058 kb on + strand, within MMJJ_RS06025 at 1120.058 kb on + strand, within MMJJ_RS06025 at 1120.090 kb on - strand, within MMJJ_RS06025 at 1120.090 kb on - strand, within MMJJ_RS06025 at 1120.112 kb on - strand, within MMJJ_RS06025 at 1120.113 kb on + strand, within MMJJ_RS06025 at 1120.113 kb on + strand, within MMJJ_RS06025 at 1120.116 kb on + strand, within MMJJ_RS06025 at 1120.116 kb on + strand, within MMJJ_RS06025 at 1120.116 kb on + strand, within MMJJ_RS06025 at 1120.122 kb on + strand, within MMJJ_RS06025 at 1120.122 kb on + strand, within MMJJ_RS06025 at 1120.129 kb on - strand, within MMJJ_RS06025 at 1120.129 kb on - strand, within MMJJ_RS06025 at 1120.129 kb on - strand, within MMJJ_RS06025 at 1120.130 kb on + strand, within MMJJ_RS06025 at 1120.130 kb on + strand, within MMJJ_RS06025 at 1120.148 kb on + strand, within MMJJ_RS06025 at 1120.152 kb on - strand, within MMJJ_RS06025 at 1120.177 kb on - strand, within MMJJ_RS06025 at 1120.177 kb on - strand, within MMJJ_RS06025 at 1120.193 kb on - strand, within MMJJ_RS06025 at 1120.194 kb on + strand, within MMJJ_RS06025 at 1120.220 kb on + strand, within MMJJ_RS06025 at 1120.236 kb on + strand, within MMJJ_RS06025 at 1120.244 kb on + strand, within MMJJ_RS06025 at 1120.262 kb on + strand, within MMJJ_RS06025 at 1120.286 kb on - strand, within MMJJ_RS06025 at 1120.286 kb on - strand, within MMJJ_RS06025 at 1120.287 kb on + strand, within MMJJ_RS06025 at 1120.289 kb on + strand, within MMJJ_RS06025 at 1120.289 kb on + strand, within MMJJ_RS06025 at 1120.311 kb on + strand, within MMJJ_RS06025 at 1120.311 kb on + strand, within MMJJ_RS06025 at 1120.373 kb on - strand, within MMJJ_RS06025 at 1120.544 kb on - strand, within MMJJ_RS06025 at 1120.545 kb on + strand, within MMJJ_RS06025 at 1120.589 kb on + strand, within MMJJ_RS06025 at 1120.626 kb on + strand, within MMJJ_RS06025 at 1120.684 kb on - strand, within MMJJ_RS06025 at 1120.684 kb on - strand, within MMJJ_RS06025 at 1120.685 kb on + strand, within MMJJ_RS06025 at 1120.685 kb on + strand, within MMJJ_RS06025 at 1120.685 kb on + strand, within MMJJ_RS06025 at 1120.685 kb on + strand, within MMJJ_RS06025 at 1120.752 kb on - strand, within MMJJ_RS06025 at 1120.753 kb on + strand, within MMJJ_RS06025 at 1120.781 kb on + strand, within MMJJ_RS06025 at 1120.801 kb on - strand at 1120.802 kb on + strand at 1120.802 kb on + strand at 1120.822 kb on - strand at 1120.823 kb on + strand at 1120.823 kb on + strand at 1120.823 kb on + strand at 1120.837 kb on - strand at 1120.837 kb on - strand at 1120.837 kb on - strand at 1120.841 kb on - strand at 1120.841 kb on - strand at 1120.841 kb on - strand at 1120.842 kb on + strand at 1120.886 kb on - strand at 1120.887 kb on + strand at 1120.972 kb on + strand at 1120.983 kb on - strand at 1121.035 kb on - strand, within MMJJ_RS06030 at 1121.036 kb on + strand, within MMJJ_RS06030 at 1121.085 kb on - strand, within MMJJ_RS06030 at 1121.128 kb on + strand, within MMJJ_RS06030 at 1121.230 kb on + strand, within MMJJ_RS06030 at 1121.279 kb on - strand, within MMJJ_RS06030 at 1121.279 kb on - strand, within MMJJ_RS06030 at 1121.401 kb on + strand, within MMJJ_RS06030 at 1121.405 kb on - strand, within MMJJ_RS06030 at 1121.406 kb on + strand, within MMJJ_RS06030 at 1121.406 kb on + strand, within MMJJ_RS06030 at 1121.415 kb on - strand at 1121.416 kb on + strand at 1121.464 kb on - strand at 1121.465 kb on + strand at 1121.471 kb on - strand at 1121.471 kb on - strand at 1121.471 kb on - strand at 1121.472 kb on + strand at 1121.480 kb on - strand at 1121.481 kb on + strand at 1121.481 kb on + strand at 1121.525 kb on + strand, within MMJJ_RS06035 at 1121.525 kb on + strand, within MMJJ_RS06035 at 1121.526 kb on - strand, within MMJJ_RS06035 at 1121.527 kb on + strand, within MMJJ_RS06035 at 1121.539 kb on + strand, within MMJJ_RS06035 at 1121.562 kb on + strand, within MMJJ_RS06035 at 1121.573 kb on - strand, within MMJJ_RS06035 at 1121.574 kb on + strand, within MMJJ_RS06035 at 1121.599 kb on - strand, within MMJJ_RS06035 at 1121.600 kb on + strand, within MMJJ_RS06035 at 1121.649 kb on + strand, within MMJJ_RS06035 at 1121.662 kb on + strand, within MMJJ_RS06035 at 1121.662 kb on + strand, within MMJJ_RS06035 at 1121.686 kb on + strand, within MMJJ_RS06035 at 1121.693 kb on - strand, within MMJJ_RS06035 at 1121.695 kb on - strand, within MMJJ_RS06035 at 1121.695 kb on - strand, within MMJJ_RS06035 at 1121.695 kb on - strand, within MMJJ_RS06035 at 1121.723 kb on - strand, within MMJJ_RS06035 at 1121.761 kb on - strand, within MMJJ_RS06035 at 1121.761 kb on - strand, within MMJJ_RS06035 at 1121.762 kb on + strand, within MMJJ_RS06035 at 1121.762 kb on + strand, within MMJJ_RS06035 at 1121.769 kb on - strand, within MMJJ_RS06035 at 1121.769 kb on - strand, within MMJJ_RS06035 at 1121.770 kb on + strand, within MMJJ_RS06035 at 1121.799 kb on - strand, within MMJJ_RS06035 at 1121.800 kb on + strand, within MMJJ_RS06035 at 1121.800 kb on + strand, within MMJJ_RS06035 at 1121.800 kb on + strand, within MMJJ_RS06035 at 1121.820 kb on - strand, within MMJJ_RS06035 at 1121.929 kb on - strand at 1122.014 kb on + strand at 1122.114 kb on - strand, within MMJJ_RS06040 at 1122.193 kb on + strand, within MMJJ_RS06040 at 1122.295 kb on + strand, within MMJJ_RS06040
Per-strain Table
Position Strand Gene LocusTag Fraction H2 N-free with 2mM Adenosine remove 1,119,967 - MMJJ_RS06025 0.33 +0.8 1,119,977 + MMJJ_RS06025 0.34 -1.9 1,120,034 + MMJJ_RS06025 0.38 -0.7 1,120,053 - MMJJ_RS06025 0.39 -1.4 1,120,053 - MMJJ_RS06025 0.39 -1.4 1,120,053 - MMJJ_RS06025 0.39 +0.5 1,120,054 + MMJJ_RS06025 0.39 -2.0 1,120,054 + MMJJ_RS06025 0.39 -1.4 1,120,057 - MMJJ_RS06025 0.39 -0.2 1,120,057 - MMJJ_RS06025 0.39 -0.5 1,120,057 - MMJJ_RS06025 0.39 +0.3 1,120,057 - MMJJ_RS06025 0.39 +0.1 1,120,057 - MMJJ_RS06025 0.39 -1.1 1,120,058 + MMJJ_RS06025 0.39 +0.2 1,120,058 + MMJJ_RS06025 0.39 -1.4 1,120,058 + MMJJ_RS06025 0.39 -2.2 1,120,058 + MMJJ_RS06025 0.39 -0.9 1,120,058 + MMJJ_RS06025 0.39 -1.3 1,120,058 + MMJJ_RS06025 0.39 -1.0 1,120,058 + MMJJ_RS06025 0.39 -1.0 1,120,090 - MMJJ_RS06025 0.42 -1.8 1,120,090 - MMJJ_RS06025 0.42 -0.5 1,120,112 - MMJJ_RS06025 0.43 -0.8 1,120,113 + MMJJ_RS06025 0.43 -0.6 1,120,113 + MMJJ_RS06025 0.43 -0.4 1,120,116 + MMJJ_RS06025 0.43 -1.3 1,120,116 + MMJJ_RS06025 0.43 -1.0 1,120,116 + MMJJ_RS06025 0.43 -1.3 1,120,122 + MMJJ_RS06025 0.44 -2.3 1,120,122 + MMJJ_RS06025 0.44 +0.4 1,120,129 - MMJJ_RS06025 0.44 +1.2 1,120,129 - MMJJ_RS06025 0.44 -1.3 1,120,129 - MMJJ_RS06025 0.44 -1.9 1,120,130 + MMJJ_RS06025 0.44 +0.8 1,120,130 + MMJJ_RS06025 0.44 +1.0 1,120,148 + MMJJ_RS06025 0.46 +0.3 1,120,152 - MMJJ_RS06025 0.46 -0.9 1,120,177 - MMJJ_RS06025 0.48 +0.0 1,120,177 - MMJJ_RS06025 0.48 -0.8 1,120,193 - MMJJ_RS06025 0.49 -3.2 1,120,194 + MMJJ_RS06025 0.49 -0.9 1,120,220 + MMJJ_RS06025 0.51 +0.0 1,120,236 + MMJJ_RS06025 0.52 -1.0 1,120,244 + MMJJ_RS06025 0.52 +0.8 1,120,262 + MMJJ_RS06025 0.53 +1.2 1,120,286 - MMJJ_RS06025 0.55 -1.1 1,120,286 - MMJJ_RS06025 0.55 -0.6 1,120,287 + MMJJ_RS06025 0.55 -2.0 1,120,289 + MMJJ_RS06025 0.55 -0.0 1,120,289 + MMJJ_RS06025 0.55 +1.2 1,120,311 + MMJJ_RS06025 0.57 -0.3 1,120,311 + MMJJ_RS06025 0.57 -0.1 1,120,373 - MMJJ_RS06025 0.61 +0.1 1,120,544 - MMJJ_RS06025 0.73 -0.5 1,120,545 + MMJJ_RS06025 0.73 -0.4 1,120,589 + MMJJ_RS06025 0.76 -0.8 1,120,626 + MMJJ_RS06025 0.79 -0.8 1,120,684 - MMJJ_RS06025 0.83 +0.2 1,120,684 - MMJJ_RS06025 0.83 +0.1 1,120,685 + MMJJ_RS06025 0.83 -2.7 1,120,685 + MMJJ_RS06025 0.83 +0.0 1,120,685 + MMJJ_RS06025 0.83 +0.6 1,120,685 + MMJJ_RS06025 0.83 -1.2 1,120,752 - MMJJ_RS06025 0.87 -1.4 1,120,753 + MMJJ_RS06025 0.87 -2.0 1,120,781 + MMJJ_RS06025 0.89 +0.2 1,120,801 - -1.3 1,120,802 + +0.2 1,120,802 + -2.6 1,120,822 - -2.1 1,120,823 + -1.2 1,120,823 + -1.6 1,120,823 + +1.8 1,120,837 - -2.3 1,120,837 - -1.5 1,120,837 - -2.0 1,120,841 - -0.9 1,120,841 - -2.7 1,120,841 - -1.0 1,120,842 + -0.4 1,120,886 - -1.4 1,120,887 + -1.7 1,120,972 + +0.9 1,120,983 - -1.0 1,121,035 - MMJJ_RS06030 0.16 -0.6 1,121,036 + MMJJ_RS06030 0.16 -1.2 1,121,085 - MMJJ_RS06030 0.26 -0.9 1,121,128 + MMJJ_RS06030 0.34 +0.8 1,121,230 + MMJJ_RS06030 0.54 +0.2 1,121,279 - MMJJ_RS06030 0.63 +1.0 1,121,279 - MMJJ_RS06030 0.63 +0.1 1,121,401 + MMJJ_RS06030 0.87 +2.2 1,121,405 - MMJJ_RS06030 0.88 +0.6 1,121,406 + MMJJ_RS06030 0.88 -0.5 1,121,406 + MMJJ_RS06030 0.88 -1.4 1,121,415 - -2.1 1,121,416 + -1.1 1,121,464 - -0.4 1,121,465 + +1.6 1,121,471 - -0.5 1,121,471 - -2.2 1,121,471 - +0.6 1,121,472 + -0.9 1,121,480 - -1.4 1,121,481 + -0.5 1,121,481 + -2.4 1,121,525 + MMJJ_RS06035 0.11 -1.0 1,121,525 + MMJJ_RS06035 0.11 +0.6 1,121,526 - MMJJ_RS06035 0.11 -0.1 1,121,527 + MMJJ_RS06035 0.11 -0.6 1,121,539 + MMJJ_RS06035 0.14 +0.1 1,121,562 + MMJJ_RS06035 0.19 -0.5 1,121,573 - MMJJ_RS06035 0.22 -1.3 1,121,574 + MMJJ_RS06035 0.22 -2.1 1,121,599 - MMJJ_RS06035 0.28 -1.4 1,121,600 + MMJJ_RS06035 0.28 +0.1 1,121,649 + MMJJ_RS06035 0.39 -1.0 1,121,662 + MMJJ_RS06035 0.42 -0.9 1,121,662 + MMJJ_RS06035 0.42 -1.1 1,121,686 + MMJJ_RS06035 0.47 -0.3 1,121,693 - MMJJ_RS06035 0.49 -0.9 1,121,695 - MMJJ_RS06035 0.49 -1.3 1,121,695 - MMJJ_RS06035 0.49 +0.1 1,121,695 - MMJJ_RS06035 0.49 +0.5 1,121,723 - MMJJ_RS06035 0.56 -0.4 1,121,761 - MMJJ_RS06035 0.64 +1.2 1,121,761 - MMJJ_RS06035 0.64 -1.7 1,121,762 + MMJJ_RS06035 0.64 +0.4 1,121,762 + MMJJ_RS06035 0.64 +0.8 1,121,769 - MMJJ_RS06035 0.66 -1.3 1,121,769 - MMJJ_RS06035 0.66 +0.0 1,121,770 + MMJJ_RS06035 0.66 -0.5 1,121,799 - MMJJ_RS06035 0.73 +1.5 1,121,800 + MMJJ_RS06035 0.73 -0.8 1,121,800 + MMJJ_RS06035 0.73 -1.0 1,121,800 + MMJJ_RS06035 0.73 -0.6 1,121,820 - MMJJ_RS06035 0.77 -1.3 1,121,929 - -1.6 1,122,014 + +0.6 1,122,114 - MMJJ_RS06040 0.18 +0.1 1,122,193 + MMJJ_RS06040 0.26 +1.2 1,122,295 + MMJJ_RS06040 0.37 -0.4
Or see this region's nucleotide sequence