Experiment: H2 N-free with 2mM Adenosine
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MMJJ_RS05260 and MMJJ_RS05265 are separated by 25 nucleotides MMJJ_RS05265 and MMJJ_RS05270 are separated by 20 nucleotides
MMJJ_RS05260: MMJJ_RS05260 - ATP-grasp domain-containing protein, at 971,867 to 972,916
_RS05260
MMJJ_RS05265: MMJJ_RS05265 - GTP cyclohydrolase MptA, at 972,942 to 973,889
_RS05265
MMJJ_RS05270: MMJJ_RS05270 - AAA family ATPase, at 973,910 to 975,136
_RS05270
Position (kb) 972
973
974 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 972.182 kb on - strand, within MMJJ_RS05260 at 972.301 kb on - strand, within MMJJ_RS05260 at 972.402 kb on - strand at 972.407 kb on - strand, within MMJJ_RS05260 at 972.447 kb on + strand, within MMJJ_RS05260 at 972.480 kb on + strand at 972.480 kb on + strand, within MMJJ_RS05260 at 972.485 kb on - strand, within MMJJ_RS05260 at 972.533 kb on - strand, within MMJJ_RS05260 at 972.540 kb on - strand, within MMJJ_RS05260 at 972.541 kb on + strand, within MMJJ_RS05260 at 972.581 kb on - strand, within MMJJ_RS05260 at 972.596 kb on + strand, within MMJJ_RS05260 at 972.686 kb on - strand, within MMJJ_RS05260 at 972.731 kb on - strand, within MMJJ_RS05260 at 972.731 kb on - strand, within MMJJ_RS05260 at 972.750 kb on - strand, within MMJJ_RS05260 at 972.758 kb on - strand, within MMJJ_RS05260 at 972.788 kb on + strand, within MMJJ_RS05260 at 972.788 kb on + strand, within MMJJ_RS05260 at 972.793 kb on + strand, within MMJJ_RS05260 at 972.826 kb on - strand at 972.827 kb on + strand at 972.827 kb on + strand at 972.828 kb on - strand at 972.844 kb on + strand at 972.867 kb on + strand at 972.890 kb on + strand at 972.890 kb on + strand at 972.890 kb on + strand at 972.938 kb on + strand at 972.960 kb on + strand at 973.022 kb on - strand at 973.035 kb on - strand at 973.036 kb on + strand at 973.044 kb on - strand, within MMJJ_RS05265 at 973.556 kb on + strand, within MMJJ_RS05265 at 973.681 kb on + strand, within MMJJ_RS05265 at 973.854 kb on + strand at 974.592 kb on + strand, within MMJJ_RS05270 at 974.800 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction H2 N-free with 2mM Adenosine remove 972,182 - MMJJ_RS05260 0.30 +1.1 972,301 - MMJJ_RS05260 0.41 +1.1 972,402 - +1.7 972,407 - MMJJ_RS05260 0.51 -0.6 972,447 + MMJJ_RS05260 0.55 -0.4 972,480 + +3.7 972,480 + MMJJ_RS05260 0.58 +0.5 972,485 - MMJJ_RS05260 0.59 +0.1 972,533 - MMJJ_RS05260 0.63 -1.0 972,540 - MMJJ_RS05260 0.64 +0.2 972,541 + MMJJ_RS05260 0.64 -0.6 972,581 - MMJJ_RS05260 0.68 -0.3 972,596 + MMJJ_RS05260 0.69 +0.9 972,686 - MMJJ_RS05260 0.78 -0.3 972,731 - MMJJ_RS05260 0.82 -0.6 972,731 - MMJJ_RS05260 0.82 +0.4 972,750 - MMJJ_RS05260 0.84 -0.8 972,758 - MMJJ_RS05260 0.85 -1.2 972,788 + MMJJ_RS05260 0.88 +0.1 972,788 + MMJJ_RS05260 0.88 -1.2 972,793 + MMJJ_RS05260 0.88 -0.4 972,826 - -0.6 972,827 + -1.9 972,827 + -0.0 972,828 - -0.4 972,844 + +0.2 972,867 + -1.4 972,890 + +0.3 972,890 + +0.7 972,890 + -0.6 972,938 + -0.4 972,960 + -0.9 973,022 - +0.5 973,035 - +0.7 973,036 + +2.7 973,044 - MMJJ_RS05265 0.11 +1.1 973,556 + MMJJ_RS05265 0.65 +0.4 973,681 + MMJJ_RS05265 0.78 -0.0 973,854 + -2.3 974,592 + MMJJ_RS05270 0.56 +0.9 974,800 + +1.7
Or see this region's nucleotide sequence