Experiment: H2 N-free with 2mM Adenosine
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MMJJ_RS03980 and MMJJ_RS03985 are separated by 131 nucleotides MMJJ_RS03985 and MMJJ_RS03990 are separated by 11 nucleotides MMJJ_RS03990 and MMJJ_RS03995 are separated by 34 nucleotides MMJJ_RS03995 and MMJJ_RS04000 are separated by 20 nucleotides
MMJJ_RS03980: MMJJ_RS03980 - 50S ribosomal protein P1, at 741,879 to 742,178
_RS03980
MMJJ_RS03985: MMJJ_RS03985 - TATA-box-binding protein, at 742,310 to 742,855
_RS03985
MMJJ_RS03990: MMJJ_RS03990 - imidazole glycerol phosphate synthase subunit HisH, at 742,867 to 743,478
_RS03990
MMJJ_RS03995: MMJJ_RS03995 - PHP domain-containing protein, at 743,513 to 744,412
_RS03995
MMJJ_RS04000: MMJJ_RS04000 - NAD(P)H-hydrate dehydratase, at 744,433 to 745,959
_RS04000
Position (kb) 742
743
744 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 741.889 kb on - strand at 741.891 kb on - strand at 742.180 kb on - strand at 742.180 kb on - strand at 742.181 kb on + strand at 742.250 kb on - strand at 742.250 kb on - strand at 742.250 kb on - strand at 742.250 kb on - strand at 742.250 kb on - strand at 742.251 kb on + strand at 742.258 kb on - strand at 742.710 kb on + strand at 743.480 kb on - strand at 743.485 kb on + strand at 743.518 kb on - strand at 743.519 kb on + strand at 743.519 kb on + strand at 743.531 kb on - strand at 743.532 kb on + strand at 743.532 kb on + strand at 743.570 kb on - strand at 743.571 kb on + strand at 743.571 kb on + strand at 743.673 kb on + strand, within MMJJ_RS03995 at 743.677 kb on - strand, within MMJJ_RS03995 at 743.727 kb on - strand, within MMJJ_RS03995 at 743.754 kb on + strand, within MMJJ_RS03995 at 743.816 kb on - strand, within MMJJ_RS03995 at 743.947 kb on - strand, within MMJJ_RS03995 at 743.955 kb on + strand, within MMJJ_RS03995 at 743.974 kb on + strand, within MMJJ_RS03995 at 744.014 kb on - strand, within MMJJ_RS03995 at 744.014 kb on - strand, within MMJJ_RS03995 at 744.014 kb on - strand, within MMJJ_RS03995 at 744.143 kb on - strand, within MMJJ_RS03995 at 744.173 kb on - strand, within MMJJ_RS03995 at 744.188 kb on - strand, within MMJJ_RS03995 at 744.189 kb on + strand, within MMJJ_RS03995 at 744.377 kb on - strand at 744.385 kb on - strand at 744.398 kb on - strand at 744.430 kb on - strand at 744.439 kb on - strand at 744.478 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction H2 N-free with 2mM Adenosine remove 741,889 - +0.3 741,891 - +1.0 742,180 - +0.6 742,180 - -0.9 742,181 + +0.5 742,250 - -1.9 742,250 - +0.7 742,250 - -0.5 742,250 - -0.8 742,250 - +0.4 742,251 + -1.3 742,258 - -1.0 742,710 + +1.6 743,480 - +0.9 743,485 + -0.9 743,518 - +0.9 743,519 + +1.6 743,519 + -1.4 743,531 - +1.1 743,532 + +0.5 743,532 + -1.1 743,570 - -0.4 743,571 + +0.3 743,571 + -0.2 743,673 + MMJJ_RS03995 0.18 -1.3 743,677 - MMJJ_RS03995 0.18 -0.5 743,727 - MMJJ_RS03995 0.24 +0.0 743,754 + MMJJ_RS03995 0.27 -0.5 743,816 - MMJJ_RS03995 0.34 +0.8 743,947 - MMJJ_RS03995 0.48 -0.4 743,955 + MMJJ_RS03995 0.49 -2.0 743,974 + MMJJ_RS03995 0.51 +0.6 744,014 - MMJJ_RS03995 0.56 -3.1 744,014 - MMJJ_RS03995 0.56 +0.3 744,014 - MMJJ_RS03995 0.56 +1.6 744,143 - MMJJ_RS03995 0.70 +0.6 744,173 - MMJJ_RS03995 0.73 -0.7 744,188 - MMJJ_RS03995 0.75 -0.5 744,189 + MMJJ_RS03995 0.75 +0.6 744,377 - -0.2 744,385 - +0.8 744,398 - -1.0 744,430 - +0.0 744,439 - -1.1 744,478 + -2.6
Or see this region's nucleotide sequence