Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS03775

Experiment: H2 N-free with 2mM Adenosine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMMJJ_RS03770 and MMJJ_RS03775 are separated by 963 nucleotidesMMJJ_RS03775 and MMJJ_RS03780 are separated by 226 nucleotidesMMJJ_RS03780 and MMJJ_RS03785 are separated by 57 nucleotides MMJJ_RS03770: MMJJ_RS03770 - hypothetical protein, at 701,843 to 702,091 _RS03770 MMJJ_RS03775: MMJJ_RS03775 - 50S ribosomal protein L15e, at 703,055 to 703,639 _RS03775 MMJJ_RS03780: MMJJ_RS03780 - translation initiation factor IF-2 subunit beta, at 703,866 to 704,282 _RS03780 MMJJ_RS03785: MMJJ_RS03785 - hypothetical protein, at 704,340 to 705,428 _RS03785 Position (kb) 703 704Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 702.094 kb on - strandat 702.095 kb on + strandat 702.107 kb on + strandat 702.125 kb on - strandat 702.126 kb on + strandat 702.136 kb on - strandat 702.136 kb on - strandat 702.149 kb on - strandat 702.149 kb on - strandat 702.150 kb on + strandat 702.150 kb on + strandat 702.152 kb on - strandat 702.153 kb on + strandat 702.153 kb on + strandat 702.157 kb on - strandat 702.158 kb on + strandat 702.176 kb on - strandat 702.177 kb on + strandat 702.180 kb on - strandat 702.184 kb on + strandat 702.184 kb on + strandat 702.196 kb on - strandat 702.209 kb on - strandat 702.209 kb on - strandat 702.209 kb on - strandat 702.209 kb on - strandat 702.210 kb on + strandat 702.210 kb on + strandat 702.210 kb on + strandat 702.210 kb on + strandat 702.211 kb on - strandat 702.211 kb on - strandat 702.211 kb on - strandat 702.211 kb on - strandat 702.211 kb on - strandat 702.211 kb on - strandat 702.211 kb on - strandat 702.212 kb on + strandat 702.212 kb on + strandat 702.212 kb on + strandat 702.212 kb on + strandat 702.212 kb on + strandat 702.212 kb on + strandat 702.212 kb on + strandat 702.212 kb on + strandat 702.213 kb on - strandat 702.213 kb on - strandat 702.213 kb on - strandat 702.213 kb on - strandat 702.213 kb on - strandat 702.213 kb on - strandat 702.214 kb on + strandat 702.214 kb on + strandat 702.214 kb on + strandat 702.214 kb on + strandat 702.214 kb on + strandat 702.214 kb on + strandat 702.216 kb on - strandat 702.216 kb on - strandat 702.217 kb on + strandat 702.236 kb on - strandat 702.236 kb on - strandat 702.266 kb on - strandat 702.266 kb on - strandat 702.295 kb on - strandat 702.298 kb on + strandat 702.321 kb on - strandat 702.330 kb on + strandat 702.333 kb on + strandat 702.333 kb on + strandat 702.344 kb on - strandat 702.348 kb on + strandat 702.372 kb on - strandat 702.382 kb on - strandat 702.401 kb on + strandat 702.417 kb on - strandat 702.429 kb on - strandat 702.429 kb on - strandat 702.430 kb on + strandat 702.430 kb on + strandat 702.430 kb on + strandat 702.430 kb on + strandat 702.433 kb on - strandat 702.433 kb on - strandat 702.434 kb on + strandat 702.434 kb on + strandat 702.435 kb on - strandat 702.435 kb on - strandat 702.436 kb on + strandat 702.436 kb on + strandat 702.436 kb on + strandat 702.436 kb on + strandat 702.436 kb on + strandat 702.440 kb on - strandat 702.440 kb on - strandat 702.441 kb on + strandat 702.441 kb on + strandat 702.441 kb on + strandat 702.441 kb on + strandat 702.441 kb on + strandat 702.444 kb on - strandat 702.444 kb on - strandat 702.444 kb on - strandat 702.444 kb on - strandat 702.444 kb on - strandat 702.444 kb on - strandat 702.445 kb on + strandat 702.445 kb on + strandat 702.445 kb on + strandat 702.446 kb on - strandat 702.446 kb on - strandat 702.446 kb on - strandat 702.446 kb on - strandat 702.446 kb on - strandat 702.446 kb on - strandat 702.446 kb on - strandat 702.447 kb on + strandat 702.447 kb on + strandat 702.447 kb on + strandat 702.449 kb on - strandat 702.450 kb on + strandat 702.450 kb on + strandat 702.458 kb on - strandat 702.478 kb on - strandat 702.501 kb on + strandat 702.549 kb on - strandat 702.549 kb on - strandat 702.574 kb on - strandat 702.574 kb on - strandat 702.581 kb on - strandat 702.582 kb on + strandat 702.596 kb on - strandat 702.596 kb on - strandat 702.623 kb on + strandat 702.655 kb on + strandat 702.679 kb on + strandat 702.698 kb on - strandat 702.698 kb on - strandat 702.699 kb on + strandat 702.699 kb on + strandat 702.699 kb on + strandat 702.707 kb on - strandat 702.731 kb on - strandat 702.736 kb on + strandat 702.738 kb on - strandat 702.739 kb on + strandat 702.744 kb on + strandat 702.748 kb on - strandat 702.749 kb on + strandat 702.754 kb on - strandat 702.755 kb on + strandat 702.805 kb on - strandat 702.805 kb on - strandat 702.864 kb on - strandat 702.913 kb on - strandat 702.925 kb on + strandat 702.938 kb on - strandat 703.120 kb on + strand, within MMJJ_RS03775at 703.120 kb on + strand, within MMJJ_RS03775at 703.120 kb on + strand, within MMJJ_RS03775at 703.120 kb on + strand, within MMJJ_RS03775at 703.244 kb on - strand, within MMJJ_RS03775at 703.245 kb on + strand, within MMJJ_RS03775at 703.624 kb on + strandat 703.781 kb on - strandat 703.782 kb on + strandat 703.782 kb on + strandat 703.783 kb on - strandat 703.783 kb on - strandat 704.279 kb on + strandat 704.280 kb on - strandat 704.281 kb on + strandat 704.281 kb on + strandat 704.281 kb on + strandat 704.281 kb on + strandat 704.284 kb on - strandat 704.309 kb on + strandat 704.309 kb on + strandat 704.313 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction H2 N-free with 2mM Adenosine
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702,094 - +1.1
702,095 + -1.7
702,107 + -0.2
702,125 - +2.1
702,126 + -1.3
702,136 - +0.2
702,136 - -1.7
702,149 - +0.1
702,149 - -0.9
702,150 + +0.4
702,150 + +1.3
702,152 - +0.5
702,153 + +0.6
702,153 + -0.7
702,157 - +0.3
702,158 + -1.5
702,176 - -1.4
702,177 + +0.3
702,180 - -2.7
702,184 + -0.8
702,184 + +1.1
702,196 - +0.9
702,209 - +0.4
702,209 - -1.4
702,209 - -3.3
702,209 - +0.3
702,210 + +0.2
702,210 + +2.3
702,210 + -1.9
702,210 + -0.8
702,211 - -1.8
702,211 - -1.7
702,211 - -0.6
702,211 - -0.5
702,211 - -1.9
702,211 - -2.0
702,211 - -0.2
702,212 + +1.3
702,212 + -0.1
702,212 + -0.5
702,212 + -0.1
702,212 + -1.9
702,212 + +0.5
702,212 + -2.2
702,212 + -1.5
702,213 - +0.7
702,213 - -0.5
702,213 - +1.9
702,213 - +0.6
702,213 - -1.9
702,213 - -1.9
702,214 + -2.7
702,214 + -2.0
702,214 + -0.7
702,214 + -1.6
702,214 + -0.9
702,214 + +0.7
702,216 - +1.3
702,216 - -1.1
702,217 + +0.1
702,236 - -0.5
702,236 - -0.6
702,266 - -0.7
702,266 - +0.7
702,295 - +0.4
702,298 + -0.1
702,321 - -0.2
702,330 + -0.2
702,333 + -0.3
702,333 + -1.7
702,344 - -0.9
702,348 + -0.0
702,372 - +0.4
702,382 - +0.0
702,401 + +0.5
702,417 - +2.7
702,429 - -0.0
702,429 - +0.1
702,430 + -0.0
702,430 + +0.5
702,430 + +2.7
702,430 + -1.1
702,433 - -1.3
702,433 - -2.3
702,434 + -4.3
702,434 + -0.7
702,435 - -1.8
702,435 - -1.9
702,436 + -1.8
702,436 + -1.0
702,436 + -2.1
702,436 + -1.2
702,436 + -0.5
702,440 - -1.0
702,440 - -1.0
702,441 + -1.0
702,441 + +0.0
702,441 + -0.7
702,441 + +1.2
702,441 + -2.3
702,444 - +0.2
702,444 - -2.4
702,444 - +1.0
702,444 - -0.2
702,444 - -1.2
702,444 - -1.5
702,445 + -2.6
702,445 + -2.8
702,445 + -1.6
702,446 - -2.5
702,446 - -0.3
702,446 - -0.9
702,446 - -0.7
702,446 - +1.4
702,446 - +1.7
702,446 - -2.0
702,447 + +0.1
702,447 + -1.8
702,447 + +0.8
702,449 - +1.0
702,450 + -0.5
702,450 + -0.5
702,458 - +1.2
702,478 - +1.2
702,501 + +1.1
702,549 - -0.5
702,549 - +0.1
702,574 - -0.7
702,574 - -1.6
702,581 - -0.3
702,582 + -0.2
702,596 - -0.8
702,596 - -1.5
702,623 + -0.1
702,655 + -1.1
702,679 + +3.7
702,698 - -1.0
702,698 - -0.8
702,699 + -1.1
702,699 + -0.7
702,699 + -1.0
702,707 - -0.9
702,731 - +0.4
702,736 + +0.7
702,738 - -1.1
702,739 + -0.7
702,744 + -1.0
702,748 - -0.0
702,749 + -0.4
702,754 - +0.5
702,755 + +0.3
702,805 - -0.8
702,805 - +1.3
702,864 - +0.9
702,913 - -0.2
702,925 + -0.1
702,938 - -1.5
703,120 + MMJJ_RS03775 0.11 -1.2
703,120 + MMJJ_RS03775 0.11 -0.4
703,120 + MMJJ_RS03775 0.11 -1.0
703,120 + MMJJ_RS03775 0.11 -1.3
703,244 - MMJJ_RS03775 0.32 -0.4
703,245 + MMJJ_RS03775 0.32 -1.0
703,624 + +0.5
703,781 - -0.2
703,782 + +0.1
703,782 + +1.7
703,783 - +1.5
703,783 - +0.1
704,279 + -0.7
704,280 - -0.2
704,281 + +0.5
704,281 + -0.3
704,281 + -1.0
704,281 + -0.7
704,284 - +1.8
704,309 + -1.2
704,309 + +1.5
704,313 + -0.9

Or see this region's nucleotide sequence