Experiment: H2 N-free with 2mM Adenosine
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MMJJ_RS01320 and MMJJ_RS01325 are separated by 427 nucleotides MMJJ_RS01325 and MMJJ_RS01330 are separated by 9 nucleotides
MMJJ_RS01320: MMJJ_RS01320 - indolepyruvate ferredoxin oxidoreductase subunit alpha, at 252,158 to 253,894
_RS01320
MMJJ_RS01325: MMJJ_RS01325 - magnesium/cobalt transporter CorA, at 254,322 to 255,380
_RS01325
MMJJ_RS01330: MMJJ_RS01330 - cation-transporting P-type ATPase, at 255,390 to 258,170
_RS01330
Position (kb) 254
255
256 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5 at 253.330 kb on + strand, within MMJJ_RS01320 at 253.345 kb on + strand, within MMJJ_RS01320 at 253.352 kb on - strand, within MMJJ_RS01320 at 253.352 kb on - strand, within MMJJ_RS01320 at 253.353 kb on + strand, within MMJJ_RS01320 at 253.353 kb on + strand, within MMJJ_RS01320 at 253.542 kb on - strand, within MMJJ_RS01320 at 253.543 kb on + strand, within MMJJ_RS01320 at 253.598 kb on - strand, within MMJJ_RS01320 at 253.599 kb on + strand, within MMJJ_RS01320 at 253.616 kb on + strand, within MMJJ_RS01320 at 253.693 kb on - strand, within MMJJ_RS01320 at 253.694 kb on + strand, within MMJJ_RS01320 at 253.784 kb on + strand at 253.898 kb on - strand at 253.899 kb on + strand at 253.899 kb on + strand at 253.914 kb on - strand at 253.915 kb on + strand at 253.936 kb on - strand at 253.951 kb on - strand at 253.972 kb on - strand at 253.974 kb on - strand at 253.974 kb on - strand at 253.974 kb on - strand at 253.975 kb on + strand at 253.975 kb on + strand at 253.975 kb on + strand at 254.009 kb on + strand at 254.022 kb on - strand at 254.026 kb on - strand at 254.027 kb on + strand at 254.027 kb on + strand at 254.032 kb on - strand at 254.033 kb on + strand at 254.033 kb on + strand at 254.033 kb on + strand at 254.050 kb on - strand at 254.061 kb on - strand at 254.074 kb on - strand at 254.075 kb on + strand at 254.084 kb on - strand at 254.112 kb on - strand at 254.117 kb on + strand at 254.117 kb on + strand at 254.133 kb on - strand at 254.134 kb on + strand at 254.155 kb on - strand at 254.231 kb on - strand at 254.231 kb on - strand at 254.232 kb on + strand at 254.232 kb on + strand at 254.233 kb on - strand at 254.233 kb on - strand at 254.233 kb on - strand at 254.234 kb on + strand at 254.234 kb on + strand at 254.234 kb on + strand at 254.234 kb on + strand at 254.234 kb on + strand at 254.234 kb on + strand at 254.235 kb on - strand at 254.236 kb on + strand at 254.236 kb on + strand at 254.238 kb on - strand at 254.239 kb on + strand at 254.239 kb on + strand at 254.242 kb on - strand at 254.367 kb on - strand at 254.367 kb on - strand at 254.384 kb on - strand at 254.385 kb on + strand at 254.426 kb on - strand at 254.479 kb on + strand, within MMJJ_RS01325 at 254.495 kb on - strand, within MMJJ_RS01325 at 254.545 kb on + strand, within MMJJ_RS01325 at 254.568 kb on + strand, within MMJJ_RS01325 at 254.616 kb on - strand, within MMJJ_RS01325 at 254.617 kb on + strand, within MMJJ_RS01325 at 254.630 kb on + strand, within MMJJ_RS01325 at 254.630 kb on + strand, within MMJJ_RS01325 at 254.630 kb on + strand, within MMJJ_RS01325 at 254.632 kb on + strand, within MMJJ_RS01325 at 254.635 kb on + strand, within MMJJ_RS01325 at 254.660 kb on + strand, within MMJJ_RS01325 at 254.737 kb on + strand, within MMJJ_RS01325 at 254.794 kb on - strand, within MMJJ_RS01325 at 254.795 kb on + strand, within MMJJ_RS01325 at 254.795 kb on + strand, within MMJJ_RS01325 at 254.795 kb on + strand, within MMJJ_RS01325 at 254.848 kb on + strand, within MMJJ_RS01325 at 254.942 kb on - strand, within MMJJ_RS01325 at 254.943 kb on + strand, within MMJJ_RS01325 at 254.946 kb on - strand, within MMJJ_RS01325 at 254.946 kb on - strand, within MMJJ_RS01325 at 254.947 kb on + strand, within MMJJ_RS01325 at 254.947 kb on + strand, within MMJJ_RS01325 at 254.947 kb on + strand, within MMJJ_RS01325 at 254.991 kb on - strand, within MMJJ_RS01325 at 254.994 kb on + strand, within MMJJ_RS01325 at 255.018 kb on - strand, within MMJJ_RS01325 at 255.018 kb on - strand, within MMJJ_RS01325 at 255.019 kb on + strand, within MMJJ_RS01325 at 255.024 kb on + strand, within MMJJ_RS01325 at 255.058 kb on - strand, within MMJJ_RS01325 at 255.058 kb on - strand, within MMJJ_RS01325 at 255.058 kb on - strand, within MMJJ_RS01325 at 255.059 kb on + strand, within MMJJ_RS01325 at 255.059 kb on + strand, within MMJJ_RS01325 at 255.062 kb on - strand, within MMJJ_RS01325 at 255.062 kb on - strand, within MMJJ_RS01325 at 255.062 kb on - strand, within MMJJ_RS01325 at 255.062 kb on - strand, within MMJJ_RS01325 at 255.062 kb on - strand, within MMJJ_RS01325 at 255.062 kb on - strand, within MMJJ_RS01325 at 255.063 kb on + strand, within MMJJ_RS01325 at 255.063 kb on + strand, within MMJJ_RS01325 at 255.063 kb on + strand, within MMJJ_RS01325 at 255.063 kb on + strand, within MMJJ_RS01325 at 255.063 kb on + strand, within MMJJ_RS01325 at 255.063 kb on + strand, within MMJJ_RS01325 at 255.064 kb on - strand, within MMJJ_RS01325 at 255.064 kb on - strand, within MMJJ_RS01325 at 255.064 kb on - strand, within MMJJ_RS01325 at 255.064 kb on - strand, within MMJJ_RS01325 at 255.065 kb on + strand, within MMJJ_RS01325 at 255.065 kb on + strand, within MMJJ_RS01325 at 255.074 kb on + strand, within MMJJ_RS01325 at 255.086 kb on - strand, within MMJJ_RS01325 at 255.086 kb on - strand, within MMJJ_RS01325 at 255.087 kb on + strand, within MMJJ_RS01325 at 255.108 kb on - strand, within MMJJ_RS01325 at 255.108 kb on - strand, within MMJJ_RS01325 at 255.109 kb on + strand, within MMJJ_RS01325 at 255.109 kb on + strand, within MMJJ_RS01325 at 255.109 kb on + strand, within MMJJ_RS01325 at 255.109 kb on + strand, within MMJJ_RS01325 at 255.110 kb on - strand, within MMJJ_RS01325 at 255.110 kb on - strand, within MMJJ_RS01325 at 255.111 kb on + strand, within MMJJ_RS01325 at 255.123 kb on - strand, within MMJJ_RS01325 at 255.124 kb on + strand, within MMJJ_RS01325 at 255.140 kb on + strand, within MMJJ_RS01325 at 255.207 kb on - strand, within MMJJ_RS01325 at 255.207 kb on - strand, within MMJJ_RS01325 at 255.207 kb on - strand, within MMJJ_RS01325 at 255.208 kb on + strand, within MMJJ_RS01325 at 255.208 kb on + strand, within MMJJ_RS01325 at 255.218 kb on - strand, within MMJJ_RS01325 at 255.272 kb on + strand, within MMJJ_RS01325 at 255.275 kb on - strand at 255.276 kb on + strand at 255.286 kb on + strand at 255.318 kb on + strand at 255.318 kb on + strand at 255.320 kb on + strand at 255.321 kb on - strand at 255.380 kb on - strand at 255.391 kb on - strand at 255.391 kb on - strand at 255.448 kb on - strand at 255.450 kb on - strand at 255.450 kb on - strand at 255.451 kb on + strand at 255.502 kb on - strand at 255.503 kb on + strand at 255.562 kb on - strand at 255.563 kb on + strand at 255.583 kb on + strand at 255.583 kb on + strand at 255.790 kb on + strand, within MMJJ_RS01330 at 255.891 kb on - strand, within MMJJ_RS01330 at 255.891 kb on - strand, within MMJJ_RS01330 at 255.893 kb on - strand, within MMJJ_RS01330 at 255.894 kb on + strand, within MMJJ_RS01330 at 255.894 kb on + strand, within MMJJ_RS01330 at 255.975 kb on - strand, within MMJJ_RS01330 at 255.998 kb on - strand, within MMJJ_RS01330 at 255.998 kb on - strand, within MMJJ_RS01330 at 255.999 kb on + strand, within MMJJ_RS01330 at 255.999 kb on + strand, within MMJJ_RS01330 at 256.000 kb on - strand, within MMJJ_RS01330 at 256.000 kb on - strand, within MMJJ_RS01330 at 256.001 kb on + strand, within MMJJ_RS01330 at 256.001 kb on + strand, within MMJJ_RS01330 at 256.023 kb on - strand, within MMJJ_RS01330 at 256.024 kb on + strand, within MMJJ_RS01330 at 256.029 kb on - strand, within MMJJ_RS01330 at 256.049 kb on - strand, within MMJJ_RS01330 at 256.050 kb on + strand, within MMJJ_RS01330 at 256.050 kb on + strand, within MMJJ_RS01330 at 256.090 kb on - strand, within MMJJ_RS01330 at 256.090 kb on - strand, within MMJJ_RS01330 at 256.091 kb on + strand, within MMJJ_RS01330 at 256.091 kb on + strand, within MMJJ_RS01330 at 256.122 kb on - strand, within MMJJ_RS01330 at 256.130 kb on - strand, within MMJJ_RS01330 at 256.131 kb on + strand, within MMJJ_RS01330 at 256.151 kb on - strand, within MMJJ_RS01330 at 256.239 kb on - strand, within MMJJ_RS01330 at 256.254 kb on - strand, within MMJJ_RS01330 at 256.363 kb on + strand, within MMJJ_RS01330 at 256.363 kb on + strand, within MMJJ_RS01330
Per-strain Table
Position Strand Gene LocusTag Fraction H2 N-free with 2mM Adenosine remove 253,330 + MMJJ_RS01320 0.67 -0.1 253,345 + MMJJ_RS01320 0.68 +0.7 253,352 - MMJJ_RS01320 0.69 -1.2 253,352 - MMJJ_RS01320 0.69 +0.7 253,353 + MMJJ_RS01320 0.69 +0.3 253,353 + MMJJ_RS01320 0.69 -1.4 253,542 - MMJJ_RS01320 0.80 +0.1 253,543 + MMJJ_RS01320 0.80 -0.3 253,598 - MMJJ_RS01320 0.83 +0.4 253,599 + MMJJ_RS01320 0.83 -1.1 253,616 + MMJJ_RS01320 0.84 +1.4 253,693 - MMJJ_RS01320 0.88 +1.0 253,694 + MMJJ_RS01320 0.88 -1.2 253,784 + -1.1 253,898 - +0.8 253,899 + +1.4 253,899 + +0.0 253,914 - -0.6 253,915 + -0.0 253,936 - +0.3 253,951 - +0.4 253,972 - +1.5 253,974 - -0.3 253,974 - -2.3 253,974 - +0.3 253,975 + +2.1 253,975 + +1.1 253,975 + -0.9 254,009 + -0.4 254,022 - +1.8 254,026 - +0.6 254,027 + -0.3 254,027 + +0.9 254,032 - -2.4 254,033 + -1.0 254,033 + +0.4 254,033 + -0.4 254,050 - -0.5 254,061 - -3.3 254,074 - -0.5 254,075 + +1.1 254,084 - +0.1 254,112 - +0.3 254,117 + -0.4 254,117 + -0.2 254,133 - +0.7 254,134 + -1.0 254,155 - -3.0 254,231 - +1.0 254,231 - +0.2 254,232 + +1.8 254,232 + -0.0 254,233 - -0.9 254,233 - +2.6 254,233 - -0.6 254,234 + -0.6 254,234 + -0.7 254,234 + +0.7 254,234 + +4.2 254,234 + -0.1 254,234 + +2.0 254,235 - -0.6 254,236 + +0.2 254,236 + +0.1 254,238 - -0.0 254,239 + -0.1 254,239 + -0.3 254,242 - +0.4 254,367 - +1.0 254,367 - -0.9 254,384 - +2.5 254,385 + +0.5 254,426 - +1.2 254,479 + MMJJ_RS01325 0.15 +0.6 254,495 - MMJJ_RS01325 0.16 +0.9 254,545 + MMJJ_RS01325 0.21 +0.8 254,568 + MMJJ_RS01325 0.23 -2.1 254,616 - MMJJ_RS01325 0.28 -1.0 254,617 + MMJJ_RS01325 0.28 +0.7 254,630 + MMJJ_RS01325 0.29 +0.2 254,630 + MMJJ_RS01325 0.29 +0.4 254,630 + MMJJ_RS01325 0.29 -0.6 254,632 + MMJJ_RS01325 0.29 -0.9 254,635 + MMJJ_RS01325 0.30 +1.2 254,660 + MMJJ_RS01325 0.32 -0.8 254,737 + MMJJ_RS01325 0.39 -0.5 254,794 - MMJJ_RS01325 0.45 +0.9 254,795 + MMJJ_RS01325 0.45 -0.1 254,795 + MMJJ_RS01325 0.45 -0.4 254,795 + MMJJ_RS01325 0.45 -0.6 254,848 + MMJJ_RS01325 0.50 +1.2 254,942 - MMJJ_RS01325 0.59 -1.0 254,943 + MMJJ_RS01325 0.59 +1.5 254,946 - MMJJ_RS01325 0.59 -0.0 254,946 - MMJJ_RS01325 0.59 -0.5 254,947 + MMJJ_RS01325 0.59 +0.3 254,947 + MMJJ_RS01325 0.59 -1.7 254,947 + MMJJ_RS01325 0.59 +0.1 254,991 - MMJJ_RS01325 0.63 +0.1 254,994 + MMJJ_RS01325 0.63 +0.7 255,018 - MMJJ_RS01325 0.66 -0.3 255,018 - MMJJ_RS01325 0.66 +1.5 255,019 + MMJJ_RS01325 0.66 +1.5 255,024 + MMJJ_RS01325 0.66 +0.1 255,058 - MMJJ_RS01325 0.69 +1.0 255,058 - MMJJ_RS01325 0.69 +0.7 255,058 - MMJJ_RS01325 0.69 -2.3 255,059 + MMJJ_RS01325 0.70 +1.3 255,059 + MMJJ_RS01325 0.70 -0.2 255,062 - MMJJ_RS01325 0.70 -0.6 255,062 - MMJJ_RS01325 0.70 -0.7 255,062 - MMJJ_RS01325 0.70 -0.2 255,062 - MMJJ_RS01325 0.70 +5.1 255,062 - MMJJ_RS01325 0.70 +0.3 255,062 - MMJJ_RS01325 0.70 -0.5 255,063 + MMJJ_RS01325 0.70 -2.7 255,063 + MMJJ_RS01325 0.70 -1.0 255,063 + MMJJ_RS01325 0.70 -0.6 255,063 + MMJJ_RS01325 0.70 +2.7 255,063 + MMJJ_RS01325 0.70 +0.3 255,063 + MMJJ_RS01325 0.70 +0.1 255,064 - MMJJ_RS01325 0.70 +0.4 255,064 - MMJJ_RS01325 0.70 -0.1 255,064 - MMJJ_RS01325 0.70 +1.5 255,064 - MMJJ_RS01325 0.70 -0.4 255,065 + MMJJ_RS01325 0.70 -0.1 255,065 + MMJJ_RS01325 0.70 +1.2 255,074 + MMJJ_RS01325 0.71 -1.0 255,086 - MMJJ_RS01325 0.72 +0.2 255,086 - MMJJ_RS01325 0.72 +0.6 255,087 + MMJJ_RS01325 0.72 -1.7 255,108 - MMJJ_RS01325 0.74 +1.5 255,108 - MMJJ_RS01325 0.74 -0.2 255,109 + MMJJ_RS01325 0.74 +1.0 255,109 + MMJJ_RS01325 0.74 +4.9 255,109 + MMJJ_RS01325 0.74 +1.0 255,109 + MMJJ_RS01325 0.74 -0.0 255,110 - MMJJ_RS01325 0.74 +1.2 255,110 - MMJJ_RS01325 0.74 -1.5 255,111 + MMJJ_RS01325 0.75 -1.6 255,123 - MMJJ_RS01325 0.76 -0.6 255,124 + MMJJ_RS01325 0.76 -0.7 255,140 + MMJJ_RS01325 0.77 -1.4 255,207 - MMJJ_RS01325 0.84 +0.9 255,207 - MMJJ_RS01325 0.84 -0.3 255,207 - MMJJ_RS01325 0.84 +0.3 255,208 + MMJJ_RS01325 0.84 +1.5 255,208 + MMJJ_RS01325 0.84 -0.4 255,218 - MMJJ_RS01325 0.85 +0.6 255,272 + MMJJ_RS01325 0.90 -0.9 255,275 - -0.1 255,276 + +0.4 255,286 + +1.2 255,318 + -0.9 255,318 + -1.9 255,320 + +0.9 255,321 - +2.2 255,380 - -1.0 255,391 - +0.1 255,391 - -1.4 255,448 - -2.7 255,450 - +1.8 255,450 - -0.9 255,451 + -1.4 255,502 - -0.4 255,503 + +1.9 255,562 - +0.4 255,563 + -1.5 255,583 + -0.1 255,583 + -0.5 255,790 + MMJJ_RS01330 0.14 -1.2 255,891 - MMJJ_RS01330 0.18 -3.2 255,891 - MMJJ_RS01330 0.18 +1.2 255,893 - MMJJ_RS01330 0.18 -0.7 255,894 + MMJJ_RS01330 0.18 +0.5 255,894 + MMJJ_RS01330 0.18 -0.2 255,975 - MMJJ_RS01330 0.21 +1.3 255,998 - MMJJ_RS01330 0.22 -0.9 255,998 - MMJJ_RS01330 0.22 -0.1 255,999 + MMJJ_RS01330 0.22 -0.1 255,999 + MMJJ_RS01330 0.22 -0.8 256,000 - MMJJ_RS01330 0.22 +1.2 256,000 - MMJJ_RS01330 0.22 +1.5 256,001 + MMJJ_RS01330 0.22 +1.0 256,001 + MMJJ_RS01330 0.22 -0.2 256,023 - MMJJ_RS01330 0.23 -0.7 256,024 + MMJJ_RS01330 0.23 +1.2 256,029 - MMJJ_RS01330 0.23 -3.2 256,049 - MMJJ_RS01330 0.24 +1.8 256,050 + MMJJ_RS01330 0.24 -0.1 256,050 + MMJJ_RS01330 0.24 -1.3 256,090 - MMJJ_RS01330 0.25 +1.0 256,090 - MMJJ_RS01330 0.25 +0.5 256,091 + MMJJ_RS01330 0.25 +0.6 256,091 + MMJJ_RS01330 0.25 -2.5 256,122 - MMJJ_RS01330 0.26 -0.1 256,130 - MMJJ_RS01330 0.27 +0.2 256,131 + MMJJ_RS01330 0.27 +0.1 256,151 - MMJJ_RS01330 0.27 -1.0 256,239 - MMJJ_RS01330 0.31 +0.1 256,254 - MMJJ_RS01330 0.31 +2.2 256,363 + MMJJ_RS01330 0.35 +0.8 256,363 + MMJJ_RS01330 0.35 -1.3
Or see this region's nucleotide sequence