Experiment: H2 N-free with 2mM Adenosine
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MMJJ_RS00490 and MMJJ_RS00495 are separated by 22 nucleotides MMJJ_RS00495 and MMJJ_RS00500 are separated by 163 nucleotides MMJJ_RS00500 and MMJJ_RS00505 are separated by 10 nucleotides
MMJJ_RS00490: MMJJ_RS00490 - glutamine-hydrolyzing GMP synthase, at 90,723 to 91,655
_RS00490
MMJJ_RS00495: MMJJ_RS00495 - CTP synthase (glutamine hydrolyzing), at 91,678 to 93,279
_RS00495
MMJJ_RS00500: MMJJ_RS00500 - GNAT family N-acetyltransferase, at 93,443 to 93,991
_RS00500
MMJJ_RS00505: MMJJ_RS00505 - 3'-5' exonuclease, at 94,002 to 94,577
_RS00505
Position (kb) 91
92
93
94 Strain fitness (log2 ratio) -2
-1
0
1
2 at 90.681 kb on - strand at 90.711 kb on - strand at 90.712 kb on + strand at 90.712 kb on + strand at 93.270 kb on - strand at 93.381 kb on - strand at 93.381 kb on - strand at 93.382 kb on + strand at 93.382 kb on + strand at 93.382 kb on + strand at 93.382 kb on + strand at 93.386 kb on + strand at 93.398 kb on - strand at 93.398 kb on - strand at 93.399 kb on + strand at 93.399 kb on + strand at 93.399 kb on + strand at 93.406 kb on + strand at 93.411 kb on - strand at 93.412 kb on + strand at 93.413 kb on - strand at 93.413 kb on - strand at 93.413 kb on - strand at 93.413 kb on - strand at 93.414 kb on + strand at 93.443 kb on + strand at 93.455 kb on + strand at 93.455 kb on + strand at 93.459 kb on - strand at 93.460 kb on + strand at 93.460 kb on + strand at 93.486 kb on - strand at 93.486 kb on - strand at 93.486 kb on - strand at 93.486 kb on - strand at 93.601 kb on - strand, within MMJJ_RS00500 at 93.632 kb on + strand, within MMJJ_RS00500 at 93.653 kb on + strand, within MMJJ_RS00500 at 93.656 kb on + strand, within MMJJ_RS00500 at 93.691 kb on - strand, within MMJJ_RS00500 at 93.691 kb on - strand, within MMJJ_RS00500 at 93.769 kb on + strand, within MMJJ_RS00500 at 93.772 kb on - strand, within MMJJ_RS00500 at 93.806 kb on + strand, within MMJJ_RS00500 at 94.015 kb on + strand at 94.015 kb on + strand at 94.051 kb on - strand at 94.051 kb on - strand at 94.051 kb on - strand at 94.052 kb on + strand at 94.053 kb on - strand at 94.053 kb on - strand at 94.054 kb on + strand at 94.070 kb on + strand, within MMJJ_RS00505 at 94.106 kb on + strand, within MMJJ_RS00505 at 94.118 kb on - strand, within MMJJ_RS00505 at 94.161 kb on - strand, within MMJJ_RS00505 at 94.184 kb on - strand, within MMJJ_RS00505 at 94.184 kb on - strand, within MMJJ_RS00505 at 94.184 kb on - strand, within MMJJ_RS00505 at 94.185 kb on + strand, within MMJJ_RS00505 at 94.186 kb on - strand, within MMJJ_RS00505 at 94.186 kb on - strand, within MMJJ_RS00505 at 94.209 kb on + strand, within MMJJ_RS00505 at 94.258 kb on - strand, within MMJJ_RS00505 at 94.258 kb on - strand, within MMJJ_RS00505 at 94.258 kb on - strand, within MMJJ_RS00505 at 94.259 kb on + strand, within MMJJ_RS00505 at 94.259 kb on + strand, within MMJJ_RS00505
Per-strain Table
Position Strand Gene LocusTag Fraction H2 N-free with 2mM Adenosine remove 90,681 - -0.9 90,711 - +0.5 90,712 + -0.7 90,712 + -1.3 93,270 - +0.6 93,381 - +0.3 93,381 - -1.8 93,382 + -2.2 93,382 + +0.0 93,382 + -1.1 93,382 + -1.4 93,386 + +1.8 93,398 - -1.3 93,398 - -1.3 93,399 + +0.1 93,399 + -0.4 93,399 + -1.2 93,406 + -1.5 93,411 - -0.2 93,412 + -0.2 93,413 - +1.5 93,413 - +1.6 93,413 - -2.7 93,413 - +0.8 93,414 + -0.7 93,443 + +0.2 93,455 + -0.4 93,455 + -1.5 93,459 - -1.4 93,460 + +0.4 93,460 + -0.8 93,486 - -0.8 93,486 - -0.1 93,486 - -0.9 93,486 - +0.2 93,601 - MMJJ_RS00500 0.29 -0.6 93,632 + MMJJ_RS00500 0.34 +0.1 93,653 + MMJJ_RS00500 0.38 +0.3 93,656 + MMJJ_RS00500 0.39 -0.7 93,691 - MMJJ_RS00500 0.45 +0.4 93,691 - MMJJ_RS00500 0.45 -0.4 93,769 + MMJJ_RS00500 0.59 -1.6 93,772 - MMJJ_RS00500 0.60 -0.5 93,806 + MMJJ_RS00500 0.66 +0.3 94,015 + +0.5 94,015 + -1.0 94,051 - +0.4 94,051 - -1.9 94,051 - +0.2 94,052 + +0.2 94,053 - -0.8 94,053 - -1.6 94,054 + +1.1 94,070 + MMJJ_RS00505 0.12 -1.0 94,106 + MMJJ_RS00505 0.18 +0.7 94,118 - MMJJ_RS00505 0.20 -1.3 94,161 - MMJJ_RS00505 0.28 -2.4 94,184 - MMJJ_RS00505 0.32 -2.5 94,184 - MMJJ_RS00505 0.32 +1.1 94,184 - MMJJ_RS00505 0.32 -0.7 94,185 + MMJJ_RS00505 0.32 +0.4 94,186 - MMJJ_RS00505 0.32 +0.7 94,186 - MMJJ_RS00505 0.32 +0.5 94,209 + MMJJ_RS00505 0.36 -1.4 94,258 - MMJJ_RS00505 0.44 -0.5 94,258 - MMJJ_RS00505 0.44 -1.0 94,258 - MMJJ_RS00505 0.44 +0.0 94,259 + MMJJ_RS00505 0.45 -2.2 94,259 + MMJJ_RS00505 0.45 +1.2
Or see this region's nucleotide sequence