Experiment: H2 N-free with 2mM Adenosine
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MMJJ_RS00480 and MMJJ_RS00485 are separated by 21 nucleotides MMJJ_RS00485 and MMJJ_RS00490 are separated by 124 nucleotides MMJJ_RS00490 and MMJJ_RS00495 are separated by 22 nucleotides
MMJJ_RS00480: MMJJ_RS00480 - flippase, at 88,712 to 89,983
_RS00480
MMJJ_RS00485: MMJJ_RS00485 - tetratricopeptide repeat protein, at 90,005 to 90,598
_RS00485
MMJJ_RS00490: MMJJ_RS00490 - glutamine-hydrolyzing GMP synthase, at 90,723 to 91,655
_RS00490
MMJJ_RS00495: MMJJ_RS00495 - CTP synthase (glutamine hydrolyzing), at 91,678 to 93,279
_RS00495
Position (kb) 90
91
92 Strain fitness (log2 ratio) -1
0
1
2 at 89.726 kb on + strand, within MMJJ_RS00480 at 89.730 kb on - strand, within MMJJ_RS00480 at 89.731 kb on + strand, within MMJJ_RS00480 at 89.809 kb on - strand, within MMJJ_RS00480 at 89.813 kb on - strand, within MMJJ_RS00480 at 89.818 kb on - strand, within MMJJ_RS00480 at 89.880 kb on + strand at 89.899 kb on + strand at 89.917 kb on + strand at 89.917 kb on + strand at 89.917 kb on + strand at 89.937 kb on - strand at 89.938 kb on + strand at 89.938 kb on + strand at 89.938 kb on + strand at 89.978 kb on + strand at 90.069 kb on + strand, within MMJJ_RS00485 at 90.123 kb on - strand, within MMJJ_RS00485 at 90.143 kb on + strand, within MMJJ_RS00485 at 90.175 kb on - strand, within MMJJ_RS00485 at 90.175 kb on - strand, within MMJJ_RS00485 at 90.176 kb on + strand, within MMJJ_RS00485 at 90.225 kb on + strand, within MMJJ_RS00485 at 90.280 kb on + strand, within MMJJ_RS00485 at 90.377 kb on + strand, within MMJJ_RS00485 at 90.377 kb on + strand, within MMJJ_RS00485 at 90.474 kb on + strand, within MMJJ_RS00485 at 90.474 kb on + strand, within MMJJ_RS00485 at 90.501 kb on + strand, within MMJJ_RS00485 at 90.505 kb on - strand, within MMJJ_RS00485 at 90.510 kb on - strand, within MMJJ_RS00485 at 90.531 kb on - strand, within MMJJ_RS00485 at 90.532 kb on + strand, within MMJJ_RS00485 at 90.644 kb on + strand at 90.666 kb on - strand at 90.666 kb on - strand at 90.670 kb on - strand at 90.670 kb on - strand at 90.671 kb on + strand at 90.671 kb on + strand at 90.674 kb on - strand at 90.674 kb on - strand at 90.675 kb on + strand at 90.681 kb on - strand at 90.711 kb on - strand at 90.712 kb on + strand at 90.712 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction H2 N-free with 2mM Adenosine remove 89,726 + MMJJ_RS00480 0.80 +1.0 89,730 - MMJJ_RS00480 0.80 -1.5 89,731 + MMJJ_RS00480 0.80 -0.5 89,809 - MMJJ_RS00480 0.86 -0.9 89,813 - MMJJ_RS00480 0.87 -0.2 89,818 - MMJJ_RS00480 0.87 +0.7 89,880 + -0.7 89,899 + +1.5 89,917 + -0.1 89,917 + -1.2 89,917 + -0.2 89,937 - +0.3 89,938 + -0.4 89,938 + -1.5 89,938 + -0.6 89,978 + -1.6 90,069 + MMJJ_RS00485 0.11 -0.2 90,123 - MMJJ_RS00485 0.20 -0.9 90,143 + MMJJ_RS00485 0.23 -0.2 90,175 - MMJJ_RS00485 0.29 -1.0 90,175 - MMJJ_RS00485 0.29 +0.1 90,176 + MMJJ_RS00485 0.29 -1.6 90,225 + MMJJ_RS00485 0.37 +0.8 90,280 + MMJJ_RS00485 0.46 -0.4 90,377 + MMJJ_RS00485 0.63 -1.2 90,377 + MMJJ_RS00485 0.63 -0.3 90,474 + MMJJ_RS00485 0.79 +2.0 90,474 + MMJJ_RS00485 0.79 +0.3 90,501 + MMJJ_RS00485 0.84 -1.7 90,505 - MMJJ_RS00485 0.84 -0.3 90,510 - MMJJ_RS00485 0.85 -0.6 90,531 - MMJJ_RS00485 0.89 -0.9 90,532 + MMJJ_RS00485 0.89 +0.4 90,644 + +0.6 90,666 - +0.2 90,666 - -1.1 90,670 - +0.9 90,670 - -0.2 90,671 + -1.0 90,671 + +0.9 90,674 - +0.2 90,674 - +0.3 90,675 + +0.2 90,681 - -0.9 90,711 - +0.5 90,712 + -0.7 90,712 + -1.3
Or see this region's nucleotide sequence