Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1630

Experiment: Sisomicin 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.12 mg/ml
1,709,477	+		Ga0059261_1629	0.48	-0.1
1,709,477	+		Ga0059261_1629	0.48	+1.3
1,709,477	+				+2.3
1,709,478	-		Ga0059261_1629	0.48	+0.7
1,709,478	-		Ga0059261_1629	0.48	+0.2
1,709,478	-		Ga0059261_1629	0.48	-0.6
1,709,478	-		Ga0059261_1629	0.48	+0.5
1,709,478	-		Ga0059261_1629	0.48	-0.3
1,709,478	-		Ga0059261_1629	0.48	-0.6
1,709,507	+		Ga0059261_1629	0.50	+1.8
1,709,507	+		Ga0059261_1629	0.50	-0.0
1,709,507	+		Ga0059261_1629	0.50	+0.8
1,709,507	+		Ga0059261_1629	0.50	+1.5
1,709,507	+		Ga0059261_1629	0.50	-0.1
1,709,507	+		Ga0059261_1629	0.50	-0.5
1,709,508	-		Ga0059261_1629	0.50	+0.2
1,709,508	-		Ga0059261_1629	0.50	+1.6
1,709,508	-		Ga0059261_1629	0.50	-1.8
1,709,508	-		Ga0059261_1629	0.50	+0.6
1,709,508	-		Ga0059261_1629	0.50	-1.5
1,709,588	+		Ga0059261_1629	0.54	-1.3
1,709,588	+		Ga0059261_1629	0.54	+0.5
1,709,588	+		Ga0059261_1629	0.54	+1.1
1,709,588	+		Ga0059261_1629	0.54	+0.2
1,709,588	+		Ga0059261_1629	0.54	-0.4
1,709,588	+		Ga0059261_1629	0.54	+0.1
1,709,589	-		Ga0059261_1629	0.54	-0.7
1,709,609	+		Ga0059261_1629	0.55	+0.0
1,709,610	-		Ga0059261_1629	0.55	+0.3
1,709,750	+		Ga0059261_1629	0.63	+0.3
1,709,807	+		Ga0059261_1629	0.66	+1.0
1,709,808	-		Ga0059261_1629	0.66	-0.6
1,709,808	-		Ga0059261_1629	0.66	-1.3
1,709,816	+		Ga0059261_1629	0.66	+1.3
1,709,817	-		Ga0059261_1629	0.66	-0.5
1,709,912	+		Ga0059261_1629	0.72	+0.0
1,709,912	+		Ga0059261_1629	0.72	+0.3
1,709,912	+		Ga0059261_1629	0.72	+0.1
1,709,913	-		Ga0059261_1629	0.72	+0.1
1,709,913	-		Ga0059261_1629	0.72	+0.0
1,709,913	-		Ga0059261_1629	0.72	-1.0
1,709,915	+		Ga0059261_1629	0.72	-0.9
1,709,915	+		Ga0059261_1629	0.72	+0.2
1,709,915	+		Ga0059261_1629	0.72	+1.0
1,709,915	+		Ga0059261_1629	0.72	-0.2
1,709,915	+		Ga0059261_1629	0.72	+0.1
1,709,915	+		Ga0059261_1629	0.72	-0.3
1,709,915	+		Ga0059261_1629	0.72	-0.0
1,709,915	+		Ga0059261_1629	0.72	-0.9
1,709,915	+		Ga0059261_1629	0.72	+0.2
1,709,915	+		Ga0059261_1629	0.72	-0.3
1,709,915	+		Ga0059261_1629	0.72	+0.6
1,709,916	-		Ga0059261_1629	0.72	+0.5
1,709,916	-		Ga0059261_1629	0.72	+0.1
1,709,916	-		Ga0059261_1629	0.72	+0.2
1,709,916	-		Ga0059261_1629	0.72	-1.3
1,709,916	-		Ga0059261_1629	0.72	-0.3
1,709,916	-		Ga0059261_1629	0.72	-0.8
1,710,059	+		Ga0059261_1629	0.79	+0.6
1,710,059	+		Ga0059261_1629	0.79	-0.1
1,710,060	-		Ga0059261_1629	0.79	-0.3
1,710,060	-		Ga0059261_1629	0.79	-0.4
1,710,060	-		Ga0059261_1629	0.79	+0.6
1,710,062	+		Ga0059261_1629	0.80	+0.5
1,710,062	+		Ga0059261_1629	0.80	+0.7
1,710,062	+		Ga0059261_1629	0.80	-0.1
1,710,062	+		Ga0059261_1629	0.80	-0.7
1,710,062	+		Ga0059261_1629	0.80	-0.6
1,710,062	+		Ga0059261_1629	0.80	-0.3
1,710,063	-		Ga0059261_1629	0.80	+0.0
1,710,065	+		Ga0059261_1629	0.80	-1.4
1,710,065	+		Ga0059261_1629	0.80	+0.2
1,710,065	+		Ga0059261_1629	0.80	-0.7
1,710,065	+		Ga0059261_1629	0.80	+0.2
1,710,065	+		Ga0059261_1629	0.80	+0.1
1,710,065	+		Ga0059261_1629	0.80	+0.7
1,710,065	+		Ga0059261_1629	0.80	+0.1
1,710,065	+		Ga0059261_1629	0.80	-0.1
1,710,065	+		Ga0059261_1629	0.80	+0.1
1,710,065	+		Ga0059261_1629	0.80	+0.7
1,710,065	+		Ga0059261_1629	0.80	+0.1
1,710,065	+		Ga0059261_1629	0.80	-0.3
1,710,065	+		Ga0059261_1629	0.80	-0.7
1,710,065	+				+0.3
1,710,065	+		Ga0059261_1629	0.80	-0.5
1,710,065	+		Ga0059261_1629	0.80	+0.8
1,710,065	+		Ga0059261_1629	0.80	-0.4
1,710,065	+		Ga0059261_1629	0.80	+0.5
1,710,065	+		Ga0059261_1629	0.80	-1.5
1,710,065	+		Ga0059261_1629	0.80	+0.4
1,710,065	+		Ga0059261_1629	0.80	+0.1
1,710,065	+		Ga0059261_1629	0.80	-0.0
1,710,065	+		Ga0059261_1629	0.80	-0.2
1,710,065	+		Ga0059261_1629	0.80	+0.3
1,710,065	+		Ga0059261_1629	0.80	+0.3
1,710,066	-		Ga0059261_1629	0.80	-0.6
1,710,066	-		Ga0059261_1629	0.80	-0.4
1,710,066	-		Ga0059261_1629	0.80	-0.3
1,710,066	-		Ga0059261_1629	0.80	+0.4
1,710,066	-		Ga0059261_1629	0.80	+0.0
1,710,066	-		Ga0059261_1629	0.80	-0.3
1,710,066	-		Ga0059261_1629	0.80	+0.1
1,710,066	-		Ga0059261_1629	0.80	+1.0
1,710,066	-		Ga0059261_1629	0.80	-0.8
1,710,066	-		Ga0059261_1629	0.80	+0.1
1,710,066	-		Ga0059261_1629	0.80	-0.7
1,710,066	-		Ga0059261_1629	0.80	-0.2
1,710,066	-		Ga0059261_1629	0.80	-1.0
1,710,066	-		Ga0059261_1629	0.80	-0.5
1,710,066	-		Ga0059261_1629	0.80	+0.5
1,710,066	-		Ga0059261_1629	0.80	-0.1
1,710,066	-		Ga0059261_1629	0.80	+0.3
1,710,066	-		Ga0059261_1629	0.80	+0.9
1,710,066	-		Ga0059261_1629	0.80	-0.3
1,710,066	-		Ga0059261_1629	0.80	+0.1
1,710,066	-		Ga0059261_1629	0.80	+0.1
1,710,176	+		Ga0059261_1629	0.86	-0.0
1,710,350	+				+1.3
1,710,351	-				+0.3
1,710,427	+				+1.1
1,710,427	+				-1.2
1,710,427	+				+0.1
1,710,428	-				+0.9
1,710,428	-				-0.5
1,710,428	-				-0.7
1,710,428	-				-0.4
1,710,431	+				+0.5
1,710,431	+				+1.0
1,710,431	+				+1.3
1,710,432	-				-0.5
1,710,470	-				-0.5
1,710,470	-				-0.7
1,710,470	-				-1.5
1,710,470	-				-1.0
1,710,470	-				-1.7
1,710,508	+				-0.7
1,710,508	+				-0.6
1,710,508	+				-0.7
1,710,509	-				+0.1
1,710,634	+		Ga0059261_1630	0.17	-1.0
1,710,635	-		Ga0059261_1630	0.17	+0.1
1,710,635	-		Ga0059261_1630	0.17	-1.1
1,710,682	+		Ga0059261_1630	0.21	+0.7
1,710,682	+		Ga0059261_1630	0.21	+0.4
1,710,682	+		Ga0059261_1630	0.21	-0.4
1,710,682	+		Ga0059261_1630	0.21	-0.4
1,710,682	+		Ga0059261_1630	0.21	-0.5
1,710,682	+		Ga0059261_1630	0.21	+0.4
1,710,682	+		Ga0059261_1630	0.21	-0.7
1,710,683	-		Ga0059261_1630	0.21	-0.5
1,710,683	-		Ga0059261_1630	0.21	-0.4
1,710,683	-		Ga0059261_1630	0.21	-1.0
1,710,719	+		Ga0059261_1630	0.24	-0.7
1,710,754	+		Ga0059261_1630	0.27	+0.6
1,710,754	+		Ga0059261_1630	0.27	-0.5
1,710,755	-		Ga0059261_1630	0.27	+0.2
1,710,755	-		Ga0059261_1630	0.27	+1.3
1,710,814	+		Ga0059261_1630	0.33	-0.3
1,710,814	+		Ga0059261_1630	0.33	+1.1
1,710,814	+		Ga0059261_1630	0.33	+0.0
1,710,814	+		Ga0059261_1630	0.33	-0.7
1,710,814	+				+0.3
1,710,815	-		Ga0059261_1630	0.33	-0.0
1,710,815	-		Ga0059261_1630	0.33	-0.5
1,710,815	-		Ga0059261_1630	0.33	-0.5
1,710,815	-		Ga0059261_1630	0.33	-0.1
1,710,817	+				-0.3
1,710,817	+		Ga0059261_1630	0.33	-0.0
1,710,817	+		Ga0059261_1630	0.33	+0.1
1,710,817	+		Ga0059261_1630	0.33	-0.3
1,710,817	+		Ga0059261_1630	0.33	-0.2
1,710,817	+		Ga0059261_1630	0.33	-1.3
1,710,817	+		Ga0059261_1630	0.33	+0.7
1,710,817	+		Ga0059261_1630	0.33	-0.2
1,710,817	+		Ga0059261_1630	0.33	+0.0
1,710,817	+		Ga0059261_1630	0.33	+0.2
1,710,818	-		Ga0059261_1630	0.33	-1.0
1,710,818	-		Ga0059261_1630	0.33	+0.9
1,710,818	-		Ga0059261_1630	0.33	+0.6
1,710,818	-		Ga0059261_1630	0.33	-0.7
1,710,955	+		Ga0059261_1630	0.45	-0.4
1,710,955	+		Ga0059261_1630	0.45	-0.2
1,710,955	+		Ga0059261_1630	0.45	-0.5
1,710,955	+		Ga0059261_1630	0.45	-0.2
1,710,956	-		Ga0059261_1630	0.45	+0.5
1,710,956	-		Ga0059261_1630	0.45	-0.0
1,710,976	+		Ga0059261_1630	0.47	-0.3
1,710,976	+		Ga0059261_1630	0.47	-0.6
1,710,976	+		Ga0059261_1630	0.47	+0.3
1,710,977	-		Ga0059261_1630	0.47	-1.3
1,710,977	-		Ga0059261_1630	0.47	-0.2
1,710,977	-		Ga0059261_1630	0.47	+1.0
1,710,982	+		Ga0059261_1630	0.47	-0.4
1,710,982	+		Ga0059261_1630	0.47	+0.5
1,710,982	+		Ga0059261_1630	0.47	-0.3
1,710,982	+		Ga0059261_1630	0.47	-0.5
1,710,983	-		Ga0059261_1630	0.47	-0.4
1,711,024	+		Ga0059261_1630	0.51	+0.6
1,711,192	+		Ga0059261_1630	0.66	-0.3
1,711,342	+		Ga0059261_1630	0.79	-1.4
1,711,342	+		Ga0059261_1630	0.79	-0.3
1,711,502	+				+1.3
1,711,502	+				-0.4
1,711,656	-				+0.3
1,711,737	+				-0.1
1,711,738	-				+0.0
1,711,889	+		Ga0059261_1631	0.11	+0.1
1,711,889	+		Ga0059261_1631	0.11	+0.1
1,711,890	-		Ga0059261_1631	0.11	+0.2
1,711,890	-		Ga0059261_1631	0.11	+0.7
1,711,890	-		Ga0059261_1631	0.11	+1.3
1,711,890	-		Ga0059261_1631	0.11	+0.1
1,711,949	-		Ga0059261_1631	0.16	+0.8
1,711,949	-		Ga0059261_1631	0.16	+0.3
1,711,958	+		Ga0059261_1631	0.17	-0.5
1,711,958	+		Ga0059261_1631	0.17	+0.9
1,711,958	+		Ga0059261_1631	0.17	+0.4
1,711,959	-		Ga0059261_1631	0.17	-0.5
1,711,959	-		Ga0059261_1631	0.17	+0.2
1,711,959	-		Ga0059261_1631	0.17	+0.1
1,711,959	-		Ga0059261_1631	0.17	-0.7
1,711,964	+		Ga0059261_1631	0.18	-0.3
1,711,964	+		Ga0059261_1631	0.18	-0.9
1,711,964	+		Ga0059261_1631	0.18	-0.5
1,711,964	+		Ga0059261_1631	0.18	+1.7
1,711,965	-		Ga0059261_1631	0.18	+0.9
1,711,965	-		Ga0059261_1631	0.18	+0.2
1,711,965	-		Ga0059261_1631	0.18	+0.6
1,711,965	-		Ga0059261_1631	0.18	+0.6
1,711,965	-		Ga0059261_1631	0.18	+0.5
1,711,965	-		Ga0059261_1631	0.18	-0.5
1,711,976	+		Ga0059261_1631	0.19	-0.4
1,711,977	-		Ga0059261_1631	0.19	-0.5
1,711,977	-				-0.1
1,711,977	-		Ga0059261_1631	0.19	-0.5
1,711,977	-		Ga0059261_1631	0.19	+0.3
1,712,069	+				+0.3
1,712,069	+		Ga0059261_1631	0.26	+0.6
1,712,069	+		Ga0059261_1631	0.26	+0.3
1,712,069	+		Ga0059261_1631	0.26	-0.0
1,712,070	-		Ga0059261_1631	0.26	+0.1
1,712,070	-		Ga0059261_1631	0.26	+0.2
1,712,109	+		Ga0059261_1631	0.30	+0.2
1,712,109	+		Ga0059261_1631	0.30	-0.3
1,712,109	+		Ga0059261_1631	0.30	-0.3
1,712,109	+		Ga0059261_1631	0.30	+0.1
1,712,109	+		Ga0059261_1631	0.30	+2.3
1,712,109	+		Ga0059261_1631	0.30	+1.9
1,712,109	+		Ga0059261_1631	0.30	+0.3
1,712,109	+		Ga0059261_1631	0.30	+0.4
1,712,109	+		Ga0059261_1631	0.30	+0.0
1,712,109	+		Ga0059261_1631	0.30	+0.6
1,712,109	+		Ga0059261_1631	0.30	-2.1
1,712,109	+		Ga0059261_1631	0.30	-0.0
1,712,109	+		Ga0059261_1631	0.30	-0.3
1,712,109	+		Ga0059261_1631	0.30	-0.1
1,712,109	+		Ga0059261_1631	0.30	-0.4
1,712,109	+		Ga0059261_1631	0.30	-0.0
1,712,110	-		Ga0059261_1631	0.30	-0.3
1,712,110	-		Ga0059261_1631	0.30	-0.8
1,712,110	-				-0.7
1,712,110	-		Ga0059261_1631	0.30	-0.7
1,712,110	-		Ga0059261_1631	0.30	-0.2
1,712,110	-		Ga0059261_1631	0.30	+0.3
1,712,110	-		Ga0059261_1631	0.30	+0.3
1,712,110	-		Ga0059261_1631	0.30	-0.3
1,712,110	-		Ga0059261_1631	0.30	+0.4
1,712,110	-		Ga0059261_1631	0.30	+1.0
1,712,110	-		Ga0059261_1631	0.30	+0.0
1,712,111	+		Ga0059261_1631	0.30	+1.1
1,712,111	+		Ga0059261_1631	0.30	+0.0
1,712,111	+		Ga0059261_1631	0.30	+0.3
1,712,111	+		Ga0059261_1631	0.30	-0.4
1,712,111	+		Ga0059261_1631	0.30	+0.3
1,712,111	+		Ga0059261_1631	0.30	-1.4
1,712,111	+		Ga0059261_1631	0.30	+1.1
1,712,111	+		Ga0059261_1631	0.30	-0.1
1,712,111	+		Ga0059261_1631	0.30	+0.3
1,712,111	+		Ga0059261_1631	0.30	+0.3
1,712,111	+		Ga0059261_1631	0.30	-0.4
1,712,111	+		Ga0059261_1631	0.30	+0.4
1,712,111	+		Ga0059261_1631	0.30	-0.9
1,712,111	+		Ga0059261_1631	0.30	+0.6
1,712,111	+		Ga0059261_1631	0.30	+0.2
1,712,112	-		Ga0059261_1631	0.30	+0.1
1,712,112	-		Ga0059261_1631	0.30	-0.3
1,712,112	-		Ga0059261_1631	0.30	+0.6
1,712,112	-		Ga0059261_1631	0.30	+0.2
1,712,112	-		Ga0059261_1631	0.30	+0.0
1,712,112	-		Ga0059261_1631	0.30	-0.3
1,712,112	-				+0.0
1,712,165	+		Ga0059261_1631	0.34	+0.3
1,712,166	-		Ga0059261_1631	0.34	-0.2
1,712,166	-		Ga0059261_1631	0.34	-0.4
1,712,180	+		Ga0059261_1631	0.35	-1.1
1,712,180	+		Ga0059261_1631	0.35	+0.6
1,712,180	+		Ga0059261_1631	0.35	-0.4
1,712,180	+		Ga0059261_1631	0.35	-0.2
1,712,181	-		Ga0059261_1631	0.35	+0.7
1,712,181	-		Ga0059261_1631	0.35	-0.1
1,712,181	-		Ga0059261_1631	0.35	+0.1
1,712,181	-		Ga0059261_1631	0.35	-0.9
1,712,181	-		Ga0059261_1631	0.35	-0.4
1,712,228	+		Ga0059261_1631	0.39	+0.7
1,712,228	+		Ga0059261_1631	0.39	-1.0
1,712,228	+		Ga0059261_1631	0.39	+0.5
1,712,228	+		Ga0059261_1631	0.39	+1.3
1,712,228	+		Ga0059261_1631	0.39	+0.6
1,712,228	+		Ga0059261_1631	0.39	+0.0
1,712,229	-		Ga0059261_1631	0.39	+0.5
1,712,229	-		Ga0059261_1631	0.39	-0.7
1,712,229	-		Ga0059261_1631	0.39	+0.6
1,712,229	-		Ga0059261_1631	0.39	-0.2
1,712,229	-		Ga0059261_1631	0.39	-0.4
1,712,229	-		Ga0059261_1631	0.39	-0.4
1,712,229	-		Ga0059261_1631	0.39	+1.1
1,712,249	+		Ga0059261_1631	0.41	-0.1
1,712,249	+		Ga0059261_1631	0.41	+0.1
1,712,249	+		Ga0059261_1631	0.41	-0.2
1,712,249	+		Ga0059261_1631	0.41	+1.5
1,712,250	-		Ga0059261_1631	0.41	-0.5
1,712,250	-		Ga0059261_1631	0.41	-0.2
1,712,250	-		Ga0059261_1631	0.41	-0.4
1,712,250	-		Ga0059261_1631	0.41	-0.1
1,712,250	-		Ga0059261_1631	0.41	+0.2
1,712,255	+		Ga0059261_1631	0.42	+0.3
1,712,256	-		Ga0059261_1631	0.42	-0.2
1,712,309	+				+0.7
1,712,309	+				-0.7
1,712,310	-		Ga0059261_1631	0.46	+1.7
1,712,310	-		Ga0059261_1631	0.46	-0.5
1,712,310	-		Ga0059261_1631	0.46	-0.1
1,712,519	-		Ga0059261_1631	0.63	-0.7
1,712,519	-		Ga0059261_1631	0.63	-0.7