Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_0877

Experiment: Sisomicin 0.12 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntGa0059261_0876 and Ga0059261_0877 are separated by 69 nucleotidesGa0059261_0877 and Ga0059261_0878 are separated by 3 nucleotides Ga0059261_0876: Ga0059261_0876 - Organic solvent tolerance protein OstA, at 915,697 to 918,006 _0876 Ga0059261_0877: Ga0059261_0877 - Parvulin-like peptidyl-prolyl isomerase, at 918,076 to 919,428 _0877 Ga0059261_0878: Ga0059261_0878 - 4-hydroxythreonine-4-phosphate dehydrogenase, at 919,432 to 920,436 _0878 Position (kb) 918 919 920Strain fitness (log2 ratio) -3 -2 -1 0 1at 918.004 kb on + strandat 918.004 kb on + strandat 918.005 kb on - strandat 918.005 kb on - strandat 918.071 kb on + strandat 918.071 kb on + strandat 918.090 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Sisomicin 0.12 mg/ml
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918,004 + +1.1
918,004 + -0.6
918,005 - +0.1
918,005 - +0.0
918,071 + -0.2
918,071 + -3.0
918,090 + -0.5

Or see this region's nucleotide sequence