Experiment: D-Glucose 20mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS22550 and CA265_RS22555 overlap by 1 nucleotides CA265_RS22555 and CA265_RS22560 are separated by 11 nucleotides CA265_RS22560 and CA265_RS22565 are separated by 71 nucleotides
CA265_RS22550: CA265_RS22550 - hypothetical protein, at 5,525,972 to 5,527,030
_RS22550
CA265_RS22555: CA265_RS22555 - lipoyl(octanoyl) transferase, at 5,527,030 to 5,527,758
_RS22555
CA265_RS22560: CA265_RS22560 - 4'-phosphopantetheinyl transferase, at 5,527,770 to 5,528,417
_RS22560
CA265_RS22565: CA265_RS22565 - dCTP deaminase, at 5,528,489 to 5,529,025
_RS22565
Position (kb) 5527
5528 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 5526.105 kb on - strand, within CA265_RS22550 at 5526.152 kb on - strand, within CA265_RS22550 at 5526.152 kb on - strand, within CA265_RS22550 at 5526.187 kb on + strand, within CA265_RS22550 at 5526.218 kb on - strand, within CA265_RS22550 at 5526.294 kb on - strand, within CA265_RS22550 at 5526.313 kb on + strand, within CA265_RS22550 at 5526.322 kb on + strand, within CA265_RS22550 at 5526.550 kb on + strand, within CA265_RS22550 at 5526.551 kb on - strand, within CA265_RS22550 at 5526.577 kb on + strand, within CA265_RS22550 at 5526.618 kb on + strand, within CA265_RS22550 at 5526.619 kb on - strand, within CA265_RS22550 at 5526.640 kb on + strand, within CA265_RS22550 at 5526.641 kb on - strand, within CA265_RS22550 at 5526.721 kb on + strand, within CA265_RS22550 at 5526.722 kb on - strand, within CA265_RS22550 at 5526.751 kb on - strand, within CA265_RS22550 at 5526.753 kb on + strand, within CA265_RS22550 at 5526.778 kb on + strand, within CA265_RS22550 at 5526.779 kb on - strand, within CA265_RS22550 at 5526.882 kb on + strand, within CA265_RS22550 at 5526.883 kb on - strand, within CA265_RS22550 at 5526.890 kb on + strand, within CA265_RS22550 at 5526.914 kb on + strand, within CA265_RS22550 at 5526.915 kb on - strand, within CA265_RS22550 at 5526.991 kb on + strand at 5526.991 kb on + strand at 5526.991 kb on + strand at 5526.991 kb on + strand at 5527.002 kb on - strand at 5527.031 kb on + strand at 5527.767 kb on - strand at 5527.785 kb on + strand at 5527.785 kb on + strand at 5527.795 kb on - strand at 5528.434 kb on + strand at 5528.455 kb on + strand at 5528.463 kb on - strand at 5528.569 kb on - strand, within CA265_RS22565 at 5528.603 kb on + strand, within CA265_RS22565 at 5528.611 kb on + strand, within CA265_RS22565 at 5528.617 kb on + strand, within CA265_RS22565 at 5528.618 kb on - strand, within CA265_RS22565 at 5528.675 kb on - strand, within CA265_RS22565 at 5528.685 kb on - strand, within CA265_RS22565 at 5528.685 kb on - strand, within CA265_RS22565 at 5528.686 kb on + strand, within CA265_RS22565 at 5528.686 kb on + strand, within CA265_RS22565 at 5528.686 kb on + strand, within CA265_RS22565 at 5528.686 kb on + strand, within CA265_RS22565 at 5528.687 kb on - strand, within CA265_RS22565 at 5528.707 kb on - strand, within CA265_RS22565 at 5528.724 kb on + strand, within CA265_RS22565 at 5528.729 kb on + strand, within CA265_RS22565 at 5528.751 kb on + strand, within CA265_RS22565
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose 20mM (C) remove 5,526,105 - CA265_RS22550 0.13 -1.1 5,526,152 - CA265_RS22550 0.17 -1.1 5,526,152 - CA265_RS22550 0.17 -2.7 5,526,187 + CA265_RS22550 0.20 -0.7 5,526,218 - CA265_RS22550 0.23 +0.3 5,526,294 - CA265_RS22550 0.30 +0.9 5,526,313 + CA265_RS22550 0.32 -0.0 5,526,322 + CA265_RS22550 0.33 +0.6 5,526,550 + CA265_RS22550 0.55 -0.5 5,526,551 - CA265_RS22550 0.55 +0.4 5,526,577 + CA265_RS22550 0.57 -4.1 5,526,618 + CA265_RS22550 0.61 -0.4 5,526,619 - CA265_RS22550 0.61 -1.2 5,526,640 + CA265_RS22550 0.63 +2.3 5,526,641 - CA265_RS22550 0.63 -0.6 5,526,721 + CA265_RS22550 0.71 +0.2 5,526,722 - CA265_RS22550 0.71 -3.3 5,526,751 - CA265_RS22550 0.74 -0.3 5,526,753 + CA265_RS22550 0.74 -0.5 5,526,778 + CA265_RS22550 0.76 +1.0 5,526,779 - CA265_RS22550 0.76 -1.1 5,526,882 + CA265_RS22550 0.86 -1.9 5,526,883 - CA265_RS22550 0.86 -0.2 5,526,890 + CA265_RS22550 0.87 -0.7 5,526,914 + CA265_RS22550 0.89 +0.2 5,526,915 - CA265_RS22550 0.89 -0.1 5,526,991 + +0.0 5,526,991 + -0.0 5,526,991 + -0.2 5,526,991 + +0.3 5,527,002 - -0.8 5,527,031 + -0.6 5,527,767 - +0.3 5,527,785 + -1.0 5,527,785 + +0.6 5,527,795 - -0.9 5,528,434 + +0.5 5,528,455 + -2.7 5,528,463 - +0.4 5,528,569 - CA265_RS22565 0.15 -4.5 5,528,603 + CA265_RS22565 0.21 -0.1 5,528,611 + CA265_RS22565 0.23 -0.0 5,528,617 + CA265_RS22565 0.24 -0.7 5,528,618 - CA265_RS22565 0.24 +2.1 5,528,675 - CA265_RS22565 0.35 -0.8 5,528,685 - CA265_RS22565 0.36 -0.3 5,528,685 - CA265_RS22565 0.36 -0.2 5,528,686 + CA265_RS22565 0.37 +0.8 5,528,686 + CA265_RS22565 0.37 +1.2 5,528,686 + CA265_RS22565 0.37 +0.7 5,528,686 + CA265_RS22565 0.37 -0.3 5,528,687 - CA265_RS22565 0.37 +0.1 5,528,707 - CA265_RS22565 0.41 -1.7 5,528,724 + CA265_RS22565 0.44 +1.2 5,528,729 + CA265_RS22565 0.45 +0.5 5,528,751 + CA265_RS22565 0.49 -1.1
Or see this region's nucleotide sequence