Experiment: D-Glucose 20mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS01915 and CA265_RS01920 are separated by 11 nucleotides CA265_RS01920 and CA265_RS01925 are separated by 229 nucleotides
CA265_RS01915: CA265_RS01915 - SusC/RagA family protein, at 479,791 to 482,955
_RS01915
CA265_RS01920: CA265_RS01920 - RagB/SusD family nutrient uptake outer membrane protein, at 482,967 to 484,972
_RS01920
CA265_RS01925: CA265_RS01925 - aryl-sulfate sulfohydrolase, at 485,202 to 486,632
_RS01925
Position (kb) 482
483
484
485 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 481.982 kb on + strand, within CA265_RS01915 at 482.012 kb on + strand, within CA265_RS01915 at 482.013 kb on - strand, within CA265_RS01915 at 482.026 kb on - strand, within CA265_RS01915 at 482.057 kb on + strand, within CA265_RS01915 at 482.079 kb on + strand, within CA265_RS01915 at 482.079 kb on + strand, within CA265_RS01915 at 482.158 kb on - strand, within CA265_RS01915 at 482.164 kb on - strand, within CA265_RS01915 at 482.169 kb on + strand, within CA265_RS01915 at 482.170 kb on - strand, within CA265_RS01915 at 482.170 kb on - strand, within CA265_RS01915 at 482.176 kb on + strand, within CA265_RS01915 at 482.177 kb on - strand, within CA265_RS01915 at 482.179 kb on - strand, within CA265_RS01915 at 482.180 kb on + strand, within CA265_RS01915 at 482.180 kb on + strand, within CA265_RS01915 at 482.181 kb on - strand, within CA265_RS01915 at 482.222 kb on + strand, within CA265_RS01915 at 482.222 kb on + strand, within CA265_RS01915 at 482.319 kb on + strand, within CA265_RS01915 at 482.319 kb on + strand, within CA265_RS01915 at 482.320 kb on - strand, within CA265_RS01915 at 482.323 kb on + strand, within CA265_RS01915 at 482.351 kb on + strand, within CA265_RS01915 at 482.372 kb on + strand, within CA265_RS01915 at 482.397 kb on + strand, within CA265_RS01915 at 482.406 kb on + strand, within CA265_RS01915 at 482.434 kb on - strand, within CA265_RS01915 at 482.464 kb on - strand, within CA265_RS01915 at 482.517 kb on + strand, within CA265_RS01915 at 482.518 kb on - strand, within CA265_RS01915 at 482.520 kb on + strand at 482.531 kb on - strand, within CA265_RS01915 at 482.531 kb on - strand, within CA265_RS01915 at 482.534 kb on - strand, within CA265_RS01915 at 482.559 kb on - strand, within CA265_RS01915 at 482.559 kb on - strand, within CA265_RS01915 at 482.563 kb on + strand, within CA265_RS01915 at 482.569 kb on - strand, within CA265_RS01915 at 482.613 kb on + strand, within CA265_RS01915 at 482.674 kb on - strand at 482.686 kb on - strand at 482.686 kb on - strand at 482.703 kb on - strand at 482.824 kb on - strand at 483.093 kb on + strand at 483.094 kb on - strand at 483.123 kb on + strand at 483.143 kb on + strand at 483.148 kb on + strand at 483.174 kb on + strand, within CA265_RS01920 at 483.175 kb on - strand, within CA265_RS01920 at 483.465 kb on - strand, within CA265_RS01920 at 483.466 kb on + strand, within CA265_RS01920 at 483.467 kb on - strand, within CA265_RS01920 at 483.496 kb on + strand, within CA265_RS01920 at 483.510 kb on - strand, within CA265_RS01920 at 483.592 kb on - strand, within CA265_RS01920 at 483.592 kb on - strand, within CA265_RS01920 at 483.632 kb on - strand, within CA265_RS01920 at 483.772 kb on + strand, within CA265_RS01920 at 483.772 kb on + strand, within CA265_RS01920 at 483.977 kb on + strand, within CA265_RS01920 at 483.989 kb on - strand, within CA265_RS01920 at 484.104 kb on + strand, within CA265_RS01920 at 484.107 kb on - strand, within CA265_RS01920 at 484.224 kb on - strand, within CA265_RS01920 at 484.234 kb on + strand, within CA265_RS01920 at 484.235 kb on - strand, within CA265_RS01920 at 484.236 kb on + strand, within CA265_RS01920 at 484.260 kb on + strand, within CA265_RS01920 at 484.260 kb on + strand, within CA265_RS01920 at 484.261 kb on - strand, within CA265_RS01920 at 484.262 kb on + strand, within CA265_RS01920 at 484.263 kb on - strand, within CA265_RS01920 at 484.292 kb on - strand, within CA265_RS01920 at 484.317 kb on - strand, within CA265_RS01920 at 484.330 kb on - strand, within CA265_RS01920 at 484.332 kb on - strand, within CA265_RS01920 at 484.366 kb on - strand, within CA265_RS01920 at 484.375 kb on - strand, within CA265_RS01920 at 484.375 kb on - strand, within CA265_RS01920 at 484.376 kb on + strand, within CA265_RS01920 at 484.378 kb on + strand, within CA265_RS01920 at 484.379 kb on - strand, within CA265_RS01920 at 484.428 kb on + strand, within CA265_RS01920 at 484.475 kb on + strand, within CA265_RS01920 at 484.496 kb on + strand, within CA265_RS01920 at 484.560 kb on + strand, within CA265_RS01920 at 484.565 kb on + strand, within CA265_RS01920 at 484.611 kb on + strand, within CA265_RS01920 at 484.680 kb on - strand, within CA265_RS01920 at 484.685 kb on - strand, within CA265_RS01920 at 484.707 kb on + strand, within CA265_RS01920 at 484.778 kb on + strand at 484.847 kb on + strand at 484.847 kb on + strand at 484.848 kb on - strand at 484.848 kb on - strand at 484.986 kb on - strand at 485.052 kb on - strand at 485.077 kb on + strand at 485.077 kb on + strand at 485.078 kb on - strand at 485.080 kb on - strand at 485.099 kb on - strand at 485.112 kb on - strand at 485.112 kb on - strand at 485.168 kb on - strand at 485.179 kb on - strand at 485.240 kb on - strand at 485.333 kb on + strand at 485.408 kb on - strand, within CA265_RS01925 at 485.476 kb on - strand, within CA265_RS01925 at 485.496 kb on + strand, within CA265_RS01925 at 485.503 kb on + strand, within CA265_RS01925 at 485.510 kb on + strand, within CA265_RS01925 at 485.562 kb on - strand, within CA265_RS01925 at 485.616 kb on + strand, within CA265_RS01925 at 485.621 kb on + strand, within CA265_RS01925 at 485.622 kb on - strand, within CA265_RS01925 at 485.622 kb on - strand at 485.757 kb on - strand, within CA265_RS01925 at 485.757 kb on - strand, within CA265_RS01925 at 485.817 kb on + strand, within CA265_RS01925 at 485.913 kb on + strand, within CA265_RS01925 at 485.913 kb on + strand, within CA265_RS01925 at 485.914 kb on - strand, within CA265_RS01925 at 485.928 kb on + strand, within CA265_RS01925
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose 20mM (C) remove 481,982 + CA265_RS01915 0.69 +0.6 482,012 + CA265_RS01915 0.70 +0.4 482,013 - CA265_RS01915 0.70 -1.2 482,026 - CA265_RS01915 0.71 -0.4 482,057 + CA265_RS01915 0.72 +0.7 482,079 + CA265_RS01915 0.72 -0.7 482,079 + CA265_RS01915 0.72 -0.3 482,158 - CA265_RS01915 0.75 -2.6 482,164 - CA265_RS01915 0.75 -0.8 482,169 + CA265_RS01915 0.75 -1.0 482,170 - CA265_RS01915 0.75 +0.3 482,170 - CA265_RS01915 0.75 +0.9 482,176 + CA265_RS01915 0.75 +0.5 482,177 - CA265_RS01915 0.75 +0.1 482,179 - CA265_RS01915 0.75 -0.6 482,180 + CA265_RS01915 0.75 -0.4 482,180 + CA265_RS01915 0.75 +1.7 482,181 - CA265_RS01915 0.76 -0.5 482,222 + CA265_RS01915 0.77 +1.2 482,222 + CA265_RS01915 0.77 +0.7 482,319 + CA265_RS01915 0.80 -2.2 482,319 + CA265_RS01915 0.80 -0.3 482,320 - CA265_RS01915 0.80 -1.0 482,323 + CA265_RS01915 0.80 -0.2 482,351 + CA265_RS01915 0.81 -0.2 482,372 + CA265_RS01915 0.82 +0.7 482,397 + CA265_RS01915 0.82 +2.1 482,406 + CA265_RS01915 0.83 -0.6 482,434 - CA265_RS01915 0.84 +0.7 482,464 - CA265_RS01915 0.84 +1.4 482,517 + CA265_RS01915 0.86 +0.1 482,518 - CA265_RS01915 0.86 +1.4 482,520 + -0.9 482,531 - CA265_RS01915 0.87 +0.2 482,531 - CA265_RS01915 0.87 -4.1 482,534 - CA265_RS01915 0.87 +1.0 482,559 - CA265_RS01915 0.87 -0.3 482,559 - CA265_RS01915 0.87 +0.2 482,563 + CA265_RS01915 0.88 -0.4 482,569 - CA265_RS01915 0.88 -1.0 482,613 + CA265_RS01915 0.89 +0.7 482,674 - +0.9 482,686 - -0.4 482,686 - +1.3 482,703 - -0.2 482,824 - -0.3 483,093 + -2.4 483,094 - +0.9 483,123 + -3.3 483,143 + -0.2 483,148 + +0.8 483,174 + CA265_RS01920 0.10 -2.1 483,175 - CA265_RS01920 0.10 +0.2 483,465 - CA265_RS01920 0.25 -1.0 483,466 + CA265_RS01920 0.25 +2.9 483,467 - CA265_RS01920 0.25 -1.0 483,496 + CA265_RS01920 0.26 -0.3 483,510 - CA265_RS01920 0.27 -1.1 483,592 - CA265_RS01920 0.31 -0.4 483,592 - CA265_RS01920 0.31 -1.2 483,632 - CA265_RS01920 0.33 -1.9 483,772 + CA265_RS01920 0.40 +2.3 483,772 + CA265_RS01920 0.40 -0.3 483,977 + CA265_RS01920 0.50 +0.9 483,989 - CA265_RS01920 0.51 +0.3 484,104 + CA265_RS01920 0.57 -2.3 484,107 - CA265_RS01920 0.57 +0.2 484,224 - CA265_RS01920 0.63 -0.5 484,234 + CA265_RS01920 0.63 +1.3 484,235 - CA265_RS01920 0.63 +1.4 484,236 + CA265_RS01920 0.63 +2.0 484,260 + CA265_RS01920 0.64 +0.1 484,260 + CA265_RS01920 0.64 +0.4 484,261 - CA265_RS01920 0.65 +0.3 484,262 + CA265_RS01920 0.65 +0.8 484,263 - CA265_RS01920 0.65 -0.3 484,292 - CA265_RS01920 0.66 -1.1 484,317 - CA265_RS01920 0.67 -0.3 484,330 - CA265_RS01920 0.68 -0.4 484,332 - CA265_RS01920 0.68 -0.6 484,366 - CA265_RS01920 0.70 -0.6 484,375 - CA265_RS01920 0.70 -0.2 484,375 - CA265_RS01920 0.70 -0.5 484,376 + CA265_RS01920 0.70 +0.5 484,378 + CA265_RS01920 0.70 -0.2 484,379 - CA265_RS01920 0.70 -0.5 484,428 + CA265_RS01920 0.73 -0.3 484,475 + CA265_RS01920 0.75 +0.7 484,496 + CA265_RS01920 0.76 +1.0 484,560 + CA265_RS01920 0.79 -0.5 484,565 + CA265_RS01920 0.80 +0.3 484,611 + CA265_RS01920 0.82 +0.6 484,680 - CA265_RS01920 0.85 +0.6 484,685 - CA265_RS01920 0.86 +0.3 484,707 + CA265_RS01920 0.87 +0.3 484,778 + -1.7 484,847 + +0.0 484,847 + +1.6 484,848 - +0.5 484,848 - -1.5 484,986 - +0.2 485,052 - +0.1 485,077 + -2.9 485,077 + +1.5 485,078 - -1.7 485,080 - +1.2 485,099 - +1.2 485,112 - +1.2 485,112 - -1.2 485,168 - -0.4 485,179 - -0.8 485,240 - +0.6 485,333 + +0.7 485,408 - CA265_RS01925 0.14 -2.9 485,476 - CA265_RS01925 0.19 +0.3 485,496 + CA265_RS01925 0.21 +1.3 485,503 + CA265_RS01925 0.21 +0.4 485,510 + CA265_RS01925 0.22 -0.1 485,562 - CA265_RS01925 0.25 -0.1 485,616 + CA265_RS01925 0.29 +0.9 485,621 + CA265_RS01925 0.29 -1.9 485,622 - CA265_RS01925 0.29 -1.3 485,622 - -1.4 485,757 - CA265_RS01925 0.39 +0.1 485,757 - CA265_RS01925 0.39 +1.7 485,817 + CA265_RS01925 0.43 -0.3 485,913 + CA265_RS01925 0.50 -1.6 485,913 + CA265_RS01925 0.50 +0.4 485,914 - CA265_RS01925 0.50 -0.2 485,928 + CA265_RS01925 0.51 -0.4
Or see this region's nucleotide sequence