Experiment: Chlorite 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_28865 and AO356_28870 are separated by 30 nucleotides AO356_28870 and AO356_28875 are separated by 287 nucleotides
AO356_28865: AO356_28865 - histidine kinase, at 6,712,780 to 6,714,174
_28865
AO356_28870: AO356_28870 - MFS transporter, at 6,714,205 to 6,715,479
_28870
AO356_28875: AO356_28875 - porin, at 6,715,767 to 6,717,020
_28875
Position (kb)
6714
6715
6716 Strain fitness (log2 ratio)
-2
-1
0
1 at 6713.353 kb on + strand, within AO356_28865 at 6713.353 kb on + strand, within AO356_28865 at 6713.353 kb on + strand, within AO356_28865 at 6713.354 kb on - strand, within AO356_28865 at 6713.354 kb on - strand, within AO356_28865 at 6713.370 kb on + strand, within AO356_28865 at 6713.457 kb on - strand, within AO356_28865 at 6713.711 kb on - strand, within AO356_28865 at 6713.713 kb on - strand, within AO356_28865 at 6713.713 kb on - strand, within AO356_28865 at 6713.761 kb on + strand, within AO356_28865 at 6713.765 kb on + strand, within AO356_28865 at 6713.765 kb on + strand, within AO356_28865 at 6713.765 kb on + strand, within AO356_28865 at 6713.766 kb on - strand, within AO356_28865 at 6713.766 kb on - strand, within AO356_28865 at 6713.792 kb on + strand, within AO356_28865 at 6713.793 kb on - strand, within AO356_28865 at 6713.793 kb on - strand, within AO356_28865 at 6714.536 kb on + strand, within AO356_28870 at 6714.557 kb on + strand, within AO356_28870 at 6714.557 kb on + strand, within AO356_28870 at 6714.558 kb on - strand, within AO356_28870 at 6714.558 kb on - strand, within AO356_28870 at 6714.681 kb on + strand, within AO356_28870 at 6714.682 kb on - strand, within AO356_28870 at 6714.682 kb on - strand, within AO356_28870 at 6714.682 kb on - strand, within AO356_28870 at 6714.682 kb on - strand, within AO356_28870 at 6714.807 kb on + strand, within AO356_28870 at 6714.807 kb on + strand, within AO356_28870 at 6714.808 kb on - strand, within AO356_28870 at 6714.808 kb on - strand, within AO356_28870 at 6714.959 kb on + strand, within AO356_28870 at 6714.960 kb on - strand, within AO356_28870 at 6715.066 kb on - strand, within AO356_28870 at 6715.066 kb on - strand, within AO356_28870 at 6715.189 kb on + strand, within AO356_28870 at 6715.361 kb on + strand at 6715.361 kb on + strand at 6715.729 kb on - strand at 6715.729 kb on - strand at 6715.751 kb on - strand at 6715.768 kb on + strand at 6715.768 kb on + strand at 6715.791 kb on - strand at 6715.791 kb on - strand at 6715.791 kb on - strand at 6715.795 kb on + strand at 6715.795 kb on + strand at 6715.796 kb on - strand at 6715.843 kb on + strand at 6715.843 kb on + strand at 6715.894 kb on + strand, within AO356_28875 at 6715.963 kb on + strand, within AO356_28875 at 6716.084 kb on - strand, within AO356_28875 at 6716.104 kb on + strand, within AO356_28875 at 6716.105 kb on - strand, within AO356_28875 at 6716.171 kb on - strand, within AO356_28875 at 6716.171 kb on - strand, within AO356_28875 at 6716.245 kb on + strand, within AO356_28875 at 6716.338 kb on + strand, within AO356_28875 at 6716.339 kb on - strand, within AO356_28875 at 6716.344 kb on + strand, within AO356_28875 at 6716.344 kb on + strand, within AO356_28875 at 6716.344 kb on + strand, within AO356_28875 at 6716.345 kb on - strand, within AO356_28875 at 6716.375 kb on - strand, within AO356_28875 at 6716.375 kb on - strand, within AO356_28875 at 6716.389 kb on + strand, within AO356_28875 at 6716.389 kb on + strand, within AO356_28875
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.08 mM remove 6,713,353 + AO356_28865 0.41 -1.1 6,713,353 + AO356_28865 0.41 -0.3 6,713,353 + AO356_28865 0.41 -0.0 6,713,354 - AO356_28865 0.41 +0.1 6,713,354 - AO356_28865 0.41 +0.9 6,713,370 + AO356_28865 0.42 -0.6 6,713,457 - AO356_28865 0.49 +0.3 6,713,711 - AO356_28865 0.67 -1.2 6,713,713 - AO356_28865 0.67 -0.9 6,713,713 - AO356_28865 0.67 -0.2 6,713,761 + AO356_28865 0.70 +0.1 6,713,765 + AO356_28865 0.71 -0.0 6,713,765 + AO356_28865 0.71 -0.3 6,713,765 + AO356_28865 0.71 -2.5 6,713,766 - AO356_28865 0.71 +0.2 6,713,766 - AO356_28865 0.71 +0.2 6,713,792 + AO356_28865 0.73 -0.9 6,713,793 - AO356_28865 0.73 -0.1 6,713,793 - AO356_28865 0.73 +0.1 6,714,536 + AO356_28870 0.26 -0.2 6,714,557 + AO356_28870 0.28 -0.4 6,714,557 + AO356_28870 0.28 -0.2 6,714,558 - AO356_28870 0.28 -1.7 6,714,558 - AO356_28870 0.28 -0.9 6,714,681 + AO356_28870 0.37 +0.2 6,714,682 - AO356_28870 0.37 -0.6 6,714,682 - AO356_28870 0.37 -0.5 6,714,682 - AO356_28870 0.37 +0.4 6,714,682 - AO356_28870 0.37 -1.2 6,714,807 + AO356_28870 0.47 +0.4 6,714,807 + AO356_28870 0.47 +0.4 6,714,808 - AO356_28870 0.47 +1.3 6,714,808 - AO356_28870 0.47 +0.6 6,714,959 + AO356_28870 0.59 -0.7 6,714,960 - AO356_28870 0.59 +0.1 6,715,066 - AO356_28870 0.68 +0.2 6,715,066 - AO356_28870 0.68 -1.1 6,715,189 + AO356_28870 0.77 -0.8 6,715,361 + -1.1 6,715,361 + +0.1 6,715,729 - -1.0 6,715,729 - +1.0 6,715,751 - +0.0 6,715,768 + -0.1 6,715,768 + +0.1 6,715,791 - -1.0 6,715,791 - -0.3 6,715,791 - -0.3 6,715,795 + +1.3 6,715,795 + -0.4 6,715,796 - +0.9 6,715,843 + -2.0 6,715,843 + -0.3 6,715,894 + AO356_28875 0.10 -0.3 6,715,963 + AO356_28875 0.16 +0.3 6,716,084 - AO356_28875 0.25 -0.8 6,716,104 + AO356_28875 0.27 +1.0 6,716,105 - AO356_28875 0.27 +0.6 6,716,171 - AO356_28875 0.32 +0.9 6,716,171 - AO356_28875 0.32 +0.2 6,716,245 + AO356_28875 0.38 -0.1 6,716,338 + AO356_28875 0.46 -0.3 6,716,339 - AO356_28875 0.46 -0.0 6,716,344 + AO356_28875 0.46 +0.5 6,716,344 + AO356_28875 0.46 +0.7 6,716,344 + AO356_28875 0.46 +0.5 6,716,345 - AO356_28875 0.46 -0.2 6,716,375 - AO356_28875 0.48 -1.5 6,716,375 - AO356_28875 0.48 +0.1 6,716,389 + AO356_28875 0.50 +0.2 6,716,389 + AO356_28875 0.50 -1.3
Or see this region's nucleotide sequence