Experiment: Chlorite 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_25870 and AO356_25875 overlap by 4 nucleotides AO356_25875 and AO356_25880 are separated by 178 nucleotides
AO356_25870: AO356_25870 - secretion protein HlyD, at 5,847,828 to 5,849,141
_25870
AO356_25875: AO356_25875 - multidrug transporter, at 5,849,138 to 5,852,233
_25875
AO356_25880: AO356_25880 - acriflavine resistance protein B, at 5,852,412 to 5,855,516
_25880
Position (kb) 5849
5850
5851
5852
5853 Strain fitness (log2 ratio) -2
-1
0
1 at 5848.337 kb on + strand, within AO356_25870 at 5848.337 kb on + strand, within AO356_25870 at 5848.338 kb on - strand, within AO356_25870 at 5848.384 kb on - strand, within AO356_25870 at 5848.822 kb on + strand, within AO356_25870 at 5848.875 kb on + strand, within AO356_25870 at 5848.904 kb on + strand, within AO356_25870 at 5848.905 kb on - strand, within AO356_25870 at 5849.054 kb on + strand at 5849.522 kb on + strand, within AO356_25875 at 5849.569 kb on + strand, within AO356_25875 at 5849.569 kb on + strand, within AO356_25875 at 5849.752 kb on + strand, within AO356_25875 at 5849.858 kb on + strand, within AO356_25875 at 5849.880 kb on - strand, within AO356_25875 at 5850.269 kb on + strand, within AO356_25875 at 5850.270 kb on - strand, within AO356_25875 at 5850.773 kb on + strand, within AO356_25875 at 5850.774 kb on - strand, within AO356_25875 at 5850.935 kb on + strand, within AO356_25875 at 5850.936 kb on - strand, within AO356_25875 at 5851.338 kb on - strand, within AO356_25875 at 5851.338 kb on - strand, within AO356_25875 at 5851.374 kb on - strand, within AO356_25875 at 5851.709 kb on - strand, within AO356_25875 at 5851.745 kb on + strand, within AO356_25875 at 5851.745 kb on + strand, within AO356_25875 at 5851.745 kb on + strand, within AO356_25875 at 5851.745 kb on + strand, within AO356_25875 at 5851.745 kb on + strand, within AO356_25875 at 5851.746 kb on - strand, within AO356_25875 at 5851.746 kb on - strand, within AO356_25875 at 5851.746 kb on - strand, within AO356_25875 at 5851.775 kb on + strand, within AO356_25875 at 5851.775 kb on + strand, within AO356_25875 at 5851.986 kb on - strand at 5852.168 kb on + strand at 5852.168 kb on + strand at 5852.168 kb on + strand at 5852.169 kb on - strand at 5852.169 kb on - strand at 5852.175 kb on - strand at 5852.230 kb on - strand at 5852.676 kb on - strand at 5852.676 kb on - strand at 5852.676 kb on - strand at 5852.676 kb on - strand at 5852.796 kb on + strand, within AO356_25880 at 5852.874 kb on + strand, within AO356_25880 at 5853.050 kb on - strand, within AO356_25880 at 5853.219 kb on + strand, within AO356_25880
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.08 mM remove 5,848,337 + AO356_25870 0.39 -0.4 5,848,337 + AO356_25870 0.39 -0.2 5,848,338 - AO356_25870 0.39 -1.5 5,848,384 - AO356_25870 0.42 +0.1 5,848,822 + AO356_25870 0.76 -0.8 5,848,875 + AO356_25870 0.80 -1.9 5,848,904 + AO356_25870 0.82 -0.3 5,848,905 - AO356_25870 0.82 -1.2 5,849,054 + -0.6 5,849,522 + AO356_25875 0.12 -0.7 5,849,569 + AO356_25875 0.14 +0.7 5,849,569 + AO356_25875 0.14 +0.3 5,849,752 + AO356_25875 0.20 +0.2 5,849,858 + AO356_25875 0.23 -1.2 5,849,880 - AO356_25875 0.24 -0.7 5,850,269 + AO356_25875 0.37 -1.6 5,850,270 - AO356_25875 0.37 -0.7 5,850,773 + AO356_25875 0.53 -0.6 5,850,774 - AO356_25875 0.53 -1.0 5,850,935 + AO356_25875 0.58 -1.3 5,850,936 - AO356_25875 0.58 -0.4 5,851,338 - AO356_25875 0.71 +0.3 5,851,338 - AO356_25875 0.71 +0.3 5,851,374 - AO356_25875 0.72 -2.2 5,851,709 - AO356_25875 0.83 +0.2 5,851,745 + AO356_25875 0.84 +0.8 5,851,745 + AO356_25875 0.84 +0.9 5,851,745 + AO356_25875 0.84 -0.0 5,851,745 + AO356_25875 0.84 +0.5 5,851,745 + AO356_25875 0.84 -0.1 5,851,746 - AO356_25875 0.84 +0.8 5,851,746 - AO356_25875 0.84 +0.8 5,851,746 - AO356_25875 0.84 +0.6 5,851,775 + AO356_25875 0.85 +0.0 5,851,775 + AO356_25875 0.85 -1.5 5,851,986 - -1.3 5,852,168 + -0.6 5,852,168 + +0.7 5,852,168 + -0.8 5,852,169 - -1.2 5,852,169 - -0.0 5,852,175 - -1.2 5,852,230 - +1.1 5,852,676 - -0.2 5,852,676 - -0.7 5,852,676 - -0.0 5,852,676 - -0.1 5,852,796 + AO356_25880 0.12 +1.7 5,852,874 + AO356_25880 0.15 +0.7 5,853,050 - AO356_25880 0.21 -0.9 5,853,219 + AO356_25880 0.26 -0.2
Or see this region's nucleotide sequence