Experiment: Chlorite 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_25715 and AO356_25720 are separated by 17 nucleotides AO356_25720 and AO356_25725 are separated by 6 nucleotides AO356_25725 and AO356_25730 overlap by 4 nucleotides
AO356_25715: AO356_25715 - branched-chain amino acid ABC transporter substrate-binding protein, at 5,816,657 to 5,817,808
_25715
AO356_25720: AO356_25720 - polyamine ABC transporter permease, at 5,817,826 to 5,818,635
_25720
AO356_25725: AO356_25725 - ABC transporter permease, at 5,818,642 to 5,819,571
_25725
AO356_25730: AO356_25730 - ABC transporter substrate-binding protein, at 5,819,568 to 5,820,593
_25730
Position (kb)
5817
5818
5819 Strain fitness (log2 ratio)
-2
-1
0
1 at 5817.109 kb on - strand, within AO356_25715 at 5817.324 kb on + strand, within AO356_25715 at 5817.563 kb on + strand, within AO356_25715 at 5818.259 kb on + strand, within AO356_25720 at 5818.260 kb on - strand, within AO356_25720 at 5818.260 kb on - strand, within AO356_25720 at 5818.691 kb on + strand at 5818.692 kb on - strand at 5818.692 kb on - strand at 5818.697 kb on + strand at 5818.697 kb on + strand at 5818.698 kb on - strand at 5818.838 kb on + strand, within AO356_25725 at 5818.842 kb on - strand, within AO356_25725 at 5819.027 kb on + strand, within AO356_25725 at 5819.027 kb on + strand, within AO356_25725 at 5819.027 kb on + strand, within AO356_25725 at 5819.027 kb on + strand, within AO356_25725 at 5819.028 kb on - strand, within AO356_25725 at 5819.028 kb on - strand, within AO356_25725 at 5819.150 kb on + strand, within AO356_25725 at 5819.150 kb on + strand, within AO356_25725 at 5819.151 kb on - strand, within AO356_25725 at 5819.151 kb on - strand, within AO356_25725 at 5819.309 kb on - strand, within AO356_25725 at 5819.321 kb on + strand, within AO356_25725 at 5819.321 kb on + strand, within AO356_25725 at 5819.349 kb on - strand, within AO356_25725 at 5819.349 kb on - strand, within AO356_25725
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.08 mM remove 5,817,109 - AO356_25715 0.39 -0.5 5,817,324 + AO356_25715 0.58 -0.7 5,817,563 + AO356_25715 0.79 +0.4 5,818,259 + AO356_25720 0.53 -0.6 5,818,260 - AO356_25720 0.54 +0.5 5,818,260 - AO356_25720 0.54 -1.9 5,818,691 + +1.0 5,818,692 - +1.1 5,818,692 - +0.5 5,818,697 + -0.7 5,818,697 + -0.9 5,818,698 - +0.3 5,818,838 + AO356_25725 0.21 +0.6 5,818,842 - AO356_25725 0.22 +0.3 5,819,027 + AO356_25725 0.41 +1.0 5,819,027 + AO356_25725 0.41 -0.3 5,819,027 + AO356_25725 0.41 -0.6 5,819,027 + AO356_25725 0.41 +0.9 5,819,028 - AO356_25725 0.42 -0.1 5,819,028 - AO356_25725 0.42 +0.4 5,819,150 + AO356_25725 0.55 +0.0 5,819,150 + AO356_25725 0.55 +0.1 5,819,151 - AO356_25725 0.55 +0.7 5,819,151 - AO356_25725 0.55 +1.6 5,819,309 - AO356_25725 0.72 +0.8 5,819,321 + AO356_25725 0.73 -1.4 5,819,321 + AO356_25725 0.73 -1.2 5,819,349 - AO356_25725 0.76 +0.5 5,819,349 - AO356_25725 0.76 -0.4
Or see this region's nucleotide sequence