Experiment: Chlorite 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_25660 and AO356_25665 are separated by 59 nucleotides AO356_25665 and AO356_25670 are separated by 47 nucleotides AO356_25670 and AO356_25675 are separated by 31 nucleotides
AO356_25660: AO356_25660 - MFS transporter, at 5,802,474 to 5,803,688
_25660
AO356_25665: AO356_25665 - 3-beta hydroxysteroid dehydrogenase, at 5,803,748 to 5,804,614
_25665
AO356_25670: AO356_25670 - regulator, at 5,804,662 to 5,805,294
_25670
AO356_25675: AO356_25675 - histidine kinase, at 5,805,326 to 5,806,687
_25675
Position (kb) 5803
5804
5805 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5802.777 kb on + strand, within AO356_25660 at 5802.778 kb on - strand, within AO356_25660 at 5802.957 kb on + strand, within AO356_25660 at 5803.110 kb on - strand, within AO356_25660 at 5803.139 kb on - strand, within AO356_25660 at 5803.343 kb on - strand, within AO356_25660 at 5803.343 kb on - strand, within AO356_25660 at 5803.401 kb on + strand, within AO356_25660 at 5803.402 kb on - strand, within AO356_25660 at 5803.402 kb on - strand, within AO356_25660 at 5803.402 kb on - strand, within AO356_25660 at 5803.597 kb on - strand at 5803.678 kb on - strand at 5803.704 kb on + strand at 5803.704 kb on + strand at 5803.704 kb on + strand at 5803.747 kb on + strand at 5803.756 kb on - strand at 5803.756 kb on - strand at 5803.756 kb on - strand at 5803.797 kb on + strand at 5803.798 kb on - strand at 5804.274 kb on + strand, within AO356_25665 at 5804.531 kb on + strand at 5804.532 kb on - strand at 5804.532 kb on - strand at 5804.603 kb on + strand at 5804.603 kb on + strand at 5804.604 kb on - strand at 5804.907 kb on - strand, within AO356_25670 at 5804.907 kb on - strand, within AO356_25670 at 5804.907 kb on - strand, within AO356_25670 at 5804.974 kb on + strand, within AO356_25670 at 5804.975 kb on - strand, within AO356_25670 at 5804.975 kb on - strand, within AO356_25670 at 5804.975 kb on - strand, within AO356_25670 at 5804.975 kb on - strand, within AO356_25670 at 5804.978 kb on + strand, within AO356_25670 at 5805.014 kb on + strand, within AO356_25670 at 5805.014 kb on + strand, within AO356_25670 at 5805.015 kb on - strand, within AO356_25670 at 5805.020 kb on + strand, within AO356_25670 at 5805.020 kb on + strand, within AO356_25670 at 5805.021 kb on - strand, within AO356_25670 at 5805.021 kb on - strand, within AO356_25670 at 5805.021 kb on - strand, within AO356_25670 at 5805.029 kb on + strand, within AO356_25670 at 5805.030 kb on - strand, within AO356_25670 at 5805.030 kb on - strand, within AO356_25670 at 5805.030 kb on - strand, within AO356_25670 at 5805.030 kb on - strand, within AO356_25670 at 5805.030 kb on - strand, within AO356_25670 at 5805.030 kb on - strand, within AO356_25670 at 5805.062 kb on + strand, within AO356_25670
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.08 mM remove 5,802,777 + AO356_25660 0.25 -0.3 5,802,778 - AO356_25660 0.25 +0.5 5,802,957 + AO356_25660 0.40 -0.4 5,803,110 - AO356_25660 0.52 -1.3 5,803,139 - AO356_25660 0.55 +0.9 5,803,343 - AO356_25660 0.72 +0.4 5,803,343 - AO356_25660 0.72 +0.2 5,803,401 + AO356_25660 0.76 -0.5 5,803,402 - AO356_25660 0.76 -0.5 5,803,402 - AO356_25660 0.76 -0.4 5,803,402 - AO356_25660 0.76 +0.1 5,803,597 - +1.4 5,803,678 - -0.8 5,803,704 + -0.2 5,803,704 + -0.2 5,803,704 + -0.5 5,803,747 + -0.1 5,803,756 - -1.8 5,803,756 - +0.4 5,803,756 - +1.2 5,803,797 + -0.4 5,803,798 - -2.0 5,804,274 + AO356_25665 0.61 -1.0 5,804,531 + -0.2 5,804,532 - +0.2 5,804,532 - -0.2 5,804,603 + +2.0 5,804,603 + +0.4 5,804,604 - -0.6 5,804,907 - AO356_25670 0.39 -1.0 5,804,907 - AO356_25670 0.39 +0.5 5,804,907 - AO356_25670 0.39 -0.1 5,804,974 + AO356_25670 0.49 -0.6 5,804,975 - AO356_25670 0.49 +0.0 5,804,975 - AO356_25670 0.49 -0.2 5,804,975 - AO356_25670 0.49 +0.0 5,804,975 - AO356_25670 0.49 +0.2 5,804,978 + AO356_25670 0.50 +0.1 5,805,014 + AO356_25670 0.56 +0.2 5,805,014 + AO356_25670 0.56 -1.3 5,805,015 - AO356_25670 0.56 -0.2 5,805,020 + AO356_25670 0.57 +1.0 5,805,020 + AO356_25670 0.57 -0.4 5,805,021 - AO356_25670 0.57 +0.6 5,805,021 - AO356_25670 0.57 +0.7 5,805,021 - AO356_25670 0.57 -0.3 5,805,029 + AO356_25670 0.58 +0.1 5,805,030 - AO356_25670 0.58 -0.6 5,805,030 - AO356_25670 0.58 +1.0 5,805,030 - AO356_25670 0.58 +1.4 5,805,030 - AO356_25670 0.58 -0.1 5,805,030 - AO356_25670 0.58 +0.1 5,805,030 - AO356_25670 0.58 -0.5 5,805,062 + AO356_25670 0.63 -0.1
Or see this region's nucleotide sequence