Experiment: Chlorite 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_22885 and AO356_22890 are separated by 95 nucleotides AO356_22890 and AO356_22895 are separated by 222 nucleotides
AO356_22885: AO356_22885 - hypothetical protein, at 5,108,801 to 5,109,604
_22885
AO356_22890: AO356_22890 - hypothetical protein, at 5,109,700 to 5,111,709
_22890
AO356_22895: AO356_22895 - hypothetical protein, at 5,111,932 to 5,114,172
_22895
Position (kb)
5109
5110
5111
5112 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 5108.796 kb on + strand at 5108.796 kb on + strand at 5108.796 kb on + strand at 5108.797 kb on - strand at 5108.800 kb on + strand at 5108.800 kb on + strand at 5108.801 kb on - strand at 5108.801 kb on - strand at 5108.881 kb on + strand at 5108.881 kb on + strand at 5108.882 kb on - strand, within AO356_22885 at 5109.013 kb on - strand, within AO356_22885 at 5109.015 kb on + strand, within AO356_22885 at 5109.016 kb on - strand, within AO356_22885 at 5109.016 kb on - strand, within AO356_22885 at 5109.057 kb on + strand, within AO356_22885 at 5109.057 kb on + strand, within AO356_22885 at 5109.061 kb on + strand, within AO356_22885 at 5109.062 kb on - strand, within AO356_22885 at 5109.146 kb on + strand, within AO356_22885 at 5109.175 kb on - strand, within AO356_22885 at 5109.231 kb on - strand, within AO356_22885 at 5109.324 kb on + strand, within AO356_22885 at 5109.565 kb on + strand at 5109.743 kb on + strand at 5109.863 kb on + strand at 5109.863 kb on + strand at 5109.868 kb on + strand at 5109.869 kb on - strand at 5109.869 kb on - strand at 5109.869 kb on - strand at 5109.977 kb on + strand, within AO356_22890 at 5109.985 kb on - strand, within AO356_22890 at 5110.030 kb on + strand, within AO356_22890 at 5110.031 kb on - strand, within AO356_22890 at 5110.084 kb on - strand, within AO356_22890 at 5110.087 kb on + strand, within AO356_22890 at 5110.104 kb on + strand, within AO356_22890 at 5110.132 kb on + strand, within AO356_22890 at 5110.133 kb on - strand, within AO356_22890 at 5110.158 kb on + strand, within AO356_22890 at 5110.246 kb on + strand, within AO356_22890 at 5110.247 kb on - strand, within AO356_22890 at 5110.390 kb on + strand, within AO356_22890 at 5110.391 kb on - strand, within AO356_22890 at 5110.454 kb on - strand, within AO356_22890 at 5110.454 kb on - strand, within AO356_22890 at 5110.457 kb on + strand, within AO356_22890 at 5110.458 kb on - strand, within AO356_22890 at 5110.477 kb on - strand, within AO356_22890 at 5110.477 kb on - strand, within AO356_22890 at 5110.505 kb on - strand, within AO356_22890 at 5110.522 kb on - strand, within AO356_22890 at 5110.522 kb on - strand, within AO356_22890 at 5110.608 kb on + strand, within AO356_22890 at 5110.609 kb on - strand, within AO356_22890 at 5110.609 kb on - strand, within AO356_22890 at 5110.652 kb on + strand, within AO356_22890 at 5110.652 kb on + strand, within AO356_22890 at 5110.836 kb on + strand, within AO356_22890 at 5110.974 kb on - strand, within AO356_22890 at 5111.057 kb on + strand, within AO356_22890 at 5111.062 kb on + strand, within AO356_22890 at 5111.063 kb on - strand, within AO356_22890 at 5111.063 kb on - strand, within AO356_22890 at 5111.115 kb on + strand, within AO356_22890 at 5111.124 kb on + strand, within AO356_22890 at 5111.124 kb on + strand, within AO356_22890 at 5111.124 kb on + strand, within AO356_22890 at 5111.194 kb on + strand, within AO356_22890 at 5111.195 kb on - strand, within AO356_22890 at 5111.195 kb on - strand, within AO356_22890 at 5111.197 kb on - strand, within AO356_22890 at 5111.259 kb on + strand, within AO356_22890 at 5111.365 kb on - strand, within AO356_22890 at 5111.437 kb on + strand, within AO356_22890 at 5111.496 kb on + strand, within AO356_22890 at 5111.537 kb on + strand at 5111.541 kb on + strand at 5111.542 kb on - strand at 5111.542 kb on - strand at 5111.545 kb on + strand at 5111.545 kb on + strand at 5111.546 kb on - strand at 5111.593 kb on + strand at 5111.594 kb on - strand at 5111.595 kb on + strand at 5111.651 kb on - strand at 5111.651 kb on - strand at 5111.680 kb on + strand at 5111.776 kb on - strand at 5111.844 kb on + strand at 5111.844 kb on + strand at 5111.845 kb on - strand at 5111.928 kb on + strand at 5111.928 kb on + strand at 5111.929 kb on - strand at 5111.931 kb on + strand at 5111.932 kb on - strand at 5111.984 kb on + strand at 5111.984 kb on + strand at 5111.984 kb on + strand at 5111.985 kb on - strand at 5111.985 kb on - strand at 5111.996 kb on + strand at 5111.996 kb on + strand at 5111.996 kb on + strand at 5112.096 kb on + strand at 5112.097 kb on - strand at 5112.097 kb on - strand at 5112.097 kb on - strand at 5112.298 kb on - strand, within AO356_22895 at 5112.375 kb on + strand, within AO356_22895 at 5112.375 kb on + strand, within AO356_22895 at 5112.375 kb on + strand, within AO356_22895 at 5112.375 kb on + strand, within AO356_22895 at 5112.375 kb on + strand, within AO356_22895 at 5112.375 kb on + strand, within AO356_22895 at 5112.375 kb on + strand, within AO356_22895 at 5112.376 kb on - strand, within AO356_22895 at 5112.415 kb on + strand, within AO356_22895 at 5112.595 kb on - strand, within AO356_22895 at 5112.595 kb on - strand, within AO356_22895 at 5112.595 kb on - strand, within AO356_22895 at 5112.595 kb on - strand, within AO356_22895 at 5112.595 kb on - strand, within AO356_22895 at 5112.595 kb on - strand, within AO356_22895 at 5112.658 kb on - strand, within AO356_22895 at 5112.675 kb on + strand, within AO356_22895 at 5112.676 kb on - strand, within AO356_22895
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.08 mM remove 5,108,796 + +0.3 5,108,796 + -0.6 5,108,796 + +0.7 5,108,797 - -0.9 5,108,800 + +0.3 5,108,800 + +1.2 5,108,801 - -0.7 5,108,801 - -1.4 5,108,881 + +0.0 5,108,881 + -1.2 5,108,882 - AO356_22885 0.10 +0.4 5,109,013 - AO356_22885 0.26 -1.4 5,109,015 + AO356_22885 0.27 -0.6 5,109,016 - AO356_22885 0.27 +1.1 5,109,016 - AO356_22885 0.27 +0.1 5,109,057 + AO356_22885 0.32 +0.2 5,109,057 + AO356_22885 0.32 +0.5 5,109,061 + AO356_22885 0.32 -0.5 5,109,062 - AO356_22885 0.32 -1.9 5,109,146 + AO356_22885 0.43 -1.6 5,109,175 - AO356_22885 0.47 -0.0 5,109,231 - AO356_22885 0.53 +0.8 5,109,324 + AO356_22885 0.65 -0.4 5,109,565 + -0.9 5,109,743 + -1.0 5,109,863 + +0.0 5,109,863 + +0.8 5,109,868 + +0.4 5,109,869 - +0.1 5,109,869 - +1.0 5,109,869 - -0.8 5,109,977 + AO356_22890 0.14 -1.6 5,109,985 - AO356_22890 0.14 +0.0 5,110,030 + AO356_22890 0.16 -1.8 5,110,031 - AO356_22890 0.16 +0.0 5,110,084 - AO356_22890 0.19 -0.2 5,110,087 + AO356_22890 0.19 +1.8 5,110,104 + AO356_22890 0.20 -0.1 5,110,132 + AO356_22890 0.21 -1.3 5,110,133 - AO356_22890 0.22 -0.4 5,110,158 + AO356_22890 0.23 -1.6 5,110,246 + AO356_22890 0.27 -0.9 5,110,247 - AO356_22890 0.27 +0.5 5,110,390 + AO356_22890 0.34 +0.8 5,110,391 - AO356_22890 0.34 +0.4 5,110,454 - AO356_22890 0.38 +0.5 5,110,454 - AO356_22890 0.38 +0.4 5,110,457 + AO356_22890 0.38 -0.6 5,110,458 - AO356_22890 0.38 +2.1 5,110,477 - AO356_22890 0.39 +0.4 5,110,477 - AO356_22890 0.39 +0.7 5,110,505 - AO356_22890 0.40 -1.6 5,110,522 - AO356_22890 0.41 +0.2 5,110,522 - AO356_22890 0.41 +0.0 5,110,608 + AO356_22890 0.45 -0.3 5,110,609 - AO356_22890 0.45 -0.6 5,110,609 - AO356_22890 0.45 -0.7 5,110,652 + AO356_22890 0.47 -2.0 5,110,652 + AO356_22890 0.47 +0.3 5,110,836 + AO356_22890 0.57 -0.1 5,110,974 - AO356_22890 0.63 +0.5 5,111,057 + AO356_22890 0.68 -0.2 5,111,062 + AO356_22890 0.68 +0.9 5,111,063 - AO356_22890 0.68 +0.4 5,111,063 - AO356_22890 0.68 +0.6 5,111,115 + AO356_22890 0.70 -0.4 5,111,124 + AO356_22890 0.71 -0.6 5,111,124 + AO356_22890 0.71 -1.1 5,111,124 + AO356_22890 0.71 -0.2 5,111,194 + AO356_22890 0.74 -0.8 5,111,195 - AO356_22890 0.74 -1.5 5,111,195 - AO356_22890 0.74 -0.3 5,111,197 - AO356_22890 0.74 -0.7 5,111,259 + AO356_22890 0.78 -0.0 5,111,365 - AO356_22890 0.83 -0.8 5,111,437 + AO356_22890 0.86 -0.3 5,111,496 + AO356_22890 0.89 +0.2 5,111,537 + +0.8 5,111,541 + +0.4 5,111,542 - +0.0 5,111,542 - -0.0 5,111,545 + -0.1 5,111,545 + +0.1 5,111,546 - +1.4 5,111,593 + -1.1 5,111,594 - -1.2 5,111,595 + -0.2 5,111,651 - +1.0 5,111,651 - +0.2 5,111,680 + +0.1 5,111,776 - +1.1 5,111,844 + +0.5 5,111,844 + +0.8 5,111,845 - +0.1 5,111,928 + +1.2 5,111,928 + +0.1 5,111,929 - +0.1 5,111,931 + -0.2 5,111,932 - -0.1 5,111,984 + +0.4 5,111,984 + +2.8 5,111,984 + -0.2 5,111,985 - -1.7 5,111,985 - -0.9 5,111,996 + -1.1 5,111,996 + +0.8 5,111,996 + -1.2 5,112,096 + +0.2 5,112,097 - -1.0 5,112,097 - +0.1 5,112,097 - -0.9 5,112,298 - AO356_22895 0.16 -0.7 5,112,375 + AO356_22895 0.20 +1.6 5,112,375 + AO356_22895 0.20 +0.3 5,112,375 + AO356_22895 0.20 -0.0 5,112,375 + AO356_22895 0.20 -0.4 5,112,375 + AO356_22895 0.20 -1.0 5,112,375 + AO356_22895 0.20 -1.4 5,112,375 + AO356_22895 0.20 -1.2 5,112,376 - AO356_22895 0.20 -0.2 5,112,415 + AO356_22895 0.22 -0.9 5,112,595 - AO356_22895 0.30 +0.2 5,112,595 - AO356_22895 0.30 +0.4 5,112,595 - AO356_22895 0.30 +1.3 5,112,595 - AO356_22895 0.30 -0.5 5,112,595 - AO356_22895 0.30 +0.5 5,112,595 - AO356_22895 0.30 +0.1 5,112,658 - AO356_22895 0.32 -0.8 5,112,675 + AO356_22895 0.33 -0.9 5,112,676 - AO356_22895 0.33 -0.7
Or see this region's nucleotide sequence