Experiment: Chlorite 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_22645 and AO356_22650 are separated by 2 nucleotides AO356_22650 and AO356_22655 overlap by 4 nucleotides AO356_22655 and AO356_22660 overlap by 4 nucleotides
AO356_22645: AO356_22645 - chemotaxis protein CheY, at 5,060,718 to 5,061,791
_22645
AO356_22650: AO356_22650 - chemotaxis protein CheD, at 5,061,794 to 5,062,291
_22650
AO356_22655: AO356_22655 - SAM-dependent methyltransferase, at 5,062,288 to 5,063,124
_22655
AO356_22660: AO356_22660 - chemotaxis protein CheW, at 5,063,121 to 5,063,657
_22660
Position (kb)
5061
5062
5063 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 5060.955 kb on + strand, within AO356_22645 at 5060.955 kb on + strand, within AO356_22645 at 5060.955 kb on + strand, within AO356_22645 at 5060.955 kb on + strand, within AO356_22645 at 5060.955 kb on + strand, within AO356_22645 at 5060.956 kb on - strand, within AO356_22645 at 5060.956 kb on - strand, within AO356_22645 at 5060.956 kb on - strand, within AO356_22645 at 5060.956 kb on - strand, within AO356_22645 at 5061.013 kb on + strand, within AO356_22645 at 5061.013 kb on + strand, within AO356_22645 at 5061.013 kb on + strand, within AO356_22645 at 5061.013 kb on + strand, within AO356_22645 at 5061.014 kb on - strand, within AO356_22645 at 5061.659 kb on + strand, within AO356_22645 at 5061.659 kb on + strand, within AO356_22645 at 5061.659 kb on + strand, within AO356_22645 at 5061.732 kb on + strand at 5061.771 kb on + strand at 5061.772 kb on - strand at 5061.772 kb on - strand at 5061.772 kb on - strand at 5061.772 kb on - strand at 5061.772 kb on - strand at 5061.772 kb on - strand at 5062.024 kb on - strand, within AO356_22650 at 5062.024 kb on - strand, within AO356_22650 at 5062.257 kb on + strand at 5062.258 kb on - strand at 5062.373 kb on + strand, within AO356_22655 at 5062.373 kb on + strand, within AO356_22655 at 5062.439 kb on + strand, within AO356_22655 at 5062.439 kb on + strand, within AO356_22655 at 5062.440 kb on - strand, within AO356_22655 at 5062.590 kb on - strand, within AO356_22655 at 5062.590 kb on - strand, within AO356_22655 at 5062.741 kb on - strand, within AO356_22655 at 5062.741 kb on - strand, within AO356_22655 at 5062.742 kb on + strand, within AO356_22655 at 5062.742 kb on + strand, within AO356_22655 at 5062.742 kb on + strand, within AO356_22655 at 5062.743 kb on - strand, within AO356_22655 at 5062.743 kb on - strand, within AO356_22655 at 5062.743 kb on - strand, within AO356_22655 at 5062.813 kb on + strand, within AO356_22655 at 5062.813 kb on + strand, within AO356_22655 at 5062.814 kb on - strand, within AO356_22655 at 5062.814 kb on - strand, within AO356_22655 at 5062.814 kb on - strand, within AO356_22655 at 5062.814 kb on - strand, within AO356_22655 at 5062.897 kb on + strand, within AO356_22655 at 5062.897 kb on + strand, within AO356_22655 at 5062.898 kb on - strand, within AO356_22655 at 5062.898 kb on - strand, within AO356_22655 at 5062.937 kb on + strand, within AO356_22655 at 5062.938 kb on - strand, within AO356_22655 at 5063.113 kb on - strand at 5063.113 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.08 mM remove 5,060,955 + AO356_22645 0.22 +0.5 5,060,955 + AO356_22645 0.22 -0.0 5,060,955 + AO356_22645 0.22 -1.7 5,060,955 + AO356_22645 0.22 -0.4 5,060,955 + AO356_22645 0.22 -0.8 5,060,956 - AO356_22645 0.22 -0.9 5,060,956 - AO356_22645 0.22 +0.0 5,060,956 - AO356_22645 0.22 -0.4 5,060,956 - AO356_22645 0.22 +0.3 5,061,013 + AO356_22645 0.27 -0.2 5,061,013 + AO356_22645 0.27 -0.4 5,061,013 + AO356_22645 0.27 +1.4 5,061,013 + AO356_22645 0.27 +1.0 5,061,014 - AO356_22645 0.28 +0.7 5,061,659 + AO356_22645 0.88 +0.3 5,061,659 + AO356_22645 0.88 -2.5 5,061,659 + AO356_22645 0.88 -0.7 5,061,732 + +0.9 5,061,771 + -1.4 5,061,772 - +0.4 5,061,772 - -0.3 5,061,772 - +3.1 5,061,772 - +0.5 5,061,772 - +1.4 5,061,772 - +0.1 5,062,024 - AO356_22650 0.46 -1.4 5,062,024 - AO356_22650 0.46 -0.3 5,062,257 + +0.8 5,062,258 - +0.2 5,062,373 + AO356_22655 0.10 -0.5 5,062,373 + AO356_22655 0.10 +1.1 5,062,439 + AO356_22655 0.18 -0.5 5,062,439 + AO356_22655 0.18 +0.1 5,062,440 - AO356_22655 0.18 -1.5 5,062,590 - AO356_22655 0.36 +1.2 5,062,590 - AO356_22655 0.36 +0.5 5,062,741 - AO356_22655 0.54 -0.4 5,062,741 - AO356_22655 0.54 +1.1 5,062,742 + AO356_22655 0.54 +0.4 5,062,742 + AO356_22655 0.54 +0.3 5,062,742 + AO356_22655 0.54 +1.0 5,062,743 - AO356_22655 0.54 -0.6 5,062,743 - AO356_22655 0.54 -0.5 5,062,743 - AO356_22655 0.54 -0.6 5,062,813 + AO356_22655 0.63 +1.3 5,062,813 + AO356_22655 0.63 +0.4 5,062,814 - AO356_22655 0.63 -0.7 5,062,814 - AO356_22655 0.63 -0.3 5,062,814 - AO356_22655 0.63 -0.4 5,062,814 - AO356_22655 0.63 +0.5 5,062,897 + AO356_22655 0.73 -1.9 5,062,897 + AO356_22655 0.73 -0.7 5,062,898 - AO356_22655 0.73 -0.0 5,062,898 - AO356_22655 0.73 +1.5 5,062,937 + AO356_22655 0.78 -0.4 5,062,938 - AO356_22655 0.78 +0.7 5,063,113 - -1.0 5,063,113 - +0.0
Or see this region's nucleotide sequence