Experiment: Chlorite 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_22610 and AO356_22615 are separated by 76 nucleotides AO356_22615 and AO356_22620 overlap by 14 nucleotides AO356_22620 and AO356_22625 are separated by 40 nucleotides
AO356_22610: AO356_22610 - hypothetical protein, at 5,053,186 to 5,053,728
_22610
AO356_22615: AO356_22615 - nodulation protein NolW, at 5,053,805 to 5,054,443
_22615
AO356_22620: AO356_22620 - ATPase, at 5,054,430 to 5,055,506
_22620
AO356_22625: AO356_22625 - nitrate ABC transporter ATP-binding protein, at 5,055,547 to 5,056,851
_22625
Position (kb) 5054
5055
5056 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5053.728 kb on + strand at 5053.728 kb on + strand at 5053.728 kb on + strand at 5053.729 kb on - strand at 5053.729 kb on - strand at 5053.729 kb on - strand at 5054.590 kb on + strand, within AO356_22620 at 5054.591 kb on - strand, within AO356_22620 at 5055.205 kb on + strand, within AO356_22620 at 5055.205 kb on + strand, within AO356_22620 at 5055.205 kb on + strand, within AO356_22620 at 5055.205 kb on + strand, within AO356_22620 at 5055.206 kb on - strand, within AO356_22620 at 5055.206 kb on - strand, within AO356_22620 at 5055.534 kb on - strand at 5055.534 kb on - strand at 5055.534 kb on - strand at 5055.536 kb on - strand at 5055.591 kb on - strand at 5055.639 kb on + strand at 5055.640 kb on - strand at 5055.758 kb on + strand, within AO356_22625 at 5055.758 kb on + strand, within AO356_22625 at 5055.758 kb on + strand, within AO356_22625 at 5055.758 kb on + strand, within AO356_22625 at 5055.759 kb on - strand, within AO356_22625 at 5055.759 kb on - strand, within AO356_22625 at 5055.759 kb on - strand, within AO356_22625 at 5055.759 kb on - strand, within AO356_22625 at 5055.759 kb on - strand, within AO356_22625 at 5055.759 kb on - strand, within AO356_22625 at 5055.762 kb on + strand, within AO356_22625 at 5055.762 kb on + strand, within AO356_22625 at 5055.762 kb on + strand, within AO356_22625 at 5055.762 kb on + strand, within AO356_22625 at 5055.763 kb on - strand, within AO356_22625 at 5055.763 kb on - strand, within AO356_22625 at 5055.763 kb on - strand, within AO356_22625 at 5055.763 kb on - strand, within AO356_22625 at 5056.100 kb on + strand, within AO356_22625 at 5056.100 kb on + strand, within AO356_22625 at 5056.100 kb on + strand, within AO356_22625 at 5056.100 kb on + strand, within AO356_22625 at 5056.100 kb on + strand, within AO356_22625 at 5056.101 kb on - strand, within AO356_22625 at 5056.101 kb on - strand, within AO356_22625 at 5056.101 kb on - strand, within AO356_22625 at 5056.101 kb on - strand, within AO356_22625 at 5056.245 kb on + strand, within AO356_22625 at 5056.245 kb on + strand, within AO356_22625 at 5056.333 kb on + strand, within AO356_22625 at 5056.334 kb on - strand, within AO356_22625 at 5056.334 kb on - strand, within AO356_22625 at 5056.334 kb on - strand, within AO356_22625 at 5056.473 kb on + strand, within AO356_22625
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.08 mM remove 5,053,728 + -0.6 5,053,728 + -0.5 5,053,728 + +0.0 5,053,729 - +0.9 5,053,729 - -0.3 5,053,729 - +1.1 5,054,590 + AO356_22620 0.15 -0.6 5,054,591 - AO356_22620 0.15 -0.2 5,055,205 + AO356_22620 0.72 -0.7 5,055,205 + AO356_22620 0.72 -0.2 5,055,205 + AO356_22620 0.72 -1.2 5,055,205 + AO356_22620 0.72 -1.1 5,055,206 - AO356_22620 0.72 +1.0 5,055,206 - AO356_22620 0.72 -0.5 5,055,534 - -2.0 5,055,534 - -0.1 5,055,534 - -1.7 5,055,536 - +0.4 5,055,591 - -0.2 5,055,639 + -0.2 5,055,640 - -1.2 5,055,758 + AO356_22625 0.16 -0.3 5,055,758 + AO356_22625 0.16 -1.0 5,055,758 + AO356_22625 0.16 -0.8 5,055,758 + AO356_22625 0.16 -1.6 5,055,759 - AO356_22625 0.16 +0.3 5,055,759 - AO356_22625 0.16 +0.7 5,055,759 - AO356_22625 0.16 -0.5 5,055,759 - AO356_22625 0.16 +0.2 5,055,759 - AO356_22625 0.16 -0.2 5,055,759 - AO356_22625 0.16 -0.0 5,055,762 + AO356_22625 0.16 +1.3 5,055,762 + AO356_22625 0.16 -0.7 5,055,762 + AO356_22625 0.16 -0.3 5,055,762 + AO356_22625 0.16 +0.1 5,055,763 - AO356_22625 0.17 +1.1 5,055,763 - AO356_22625 0.17 +0.3 5,055,763 - AO356_22625 0.17 +0.2 5,055,763 - AO356_22625 0.17 -1.7 5,056,100 + AO356_22625 0.42 +0.4 5,056,100 + AO356_22625 0.42 -0.2 5,056,100 + AO356_22625 0.42 -0.1 5,056,100 + AO356_22625 0.42 +0.2 5,056,100 + AO356_22625 0.42 -0.3 5,056,101 - AO356_22625 0.42 +0.2 5,056,101 - AO356_22625 0.42 +2.4 5,056,101 - AO356_22625 0.42 -0.2 5,056,101 - AO356_22625 0.42 -0.7 5,056,245 + AO356_22625 0.53 -1.5 5,056,245 + AO356_22625 0.53 +0.0 5,056,333 + AO356_22625 0.60 +0.6 5,056,334 - AO356_22625 0.60 -0.2 5,056,334 - AO356_22625 0.60 -0.7 5,056,334 - AO356_22625 0.60 +0.2 5,056,473 + AO356_22625 0.71 -2.3
Or see this region's nucleotide sequence