Experiment: Chlorite 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_22430 and AO356_22435 are separated by 205 nucleotides AO356_22435 and AO356_22440 are separated by 106 nucleotides AO356_22440 and AO356_22445 are separated by 47 nucleotides AO356_22445 and AO356_22450 are separated by 62 nucleotides
AO356_22430: AO356_22430 - hypothetical protein, at 5,013,947 to 5,014,621
_22430
AO356_22435: AO356_22435 - decarboxylase, at 5,014,827 to 5,015,201
_22435
AO356_22440: AO356_22440 - LysR family transcriptional regulator, at 5,015,308 to 5,016,240
_22440
AO356_22445: AO356_22445 - cupin, at 5,016,288 to 5,016,632
_22445
AO356_22450: AO356_22450 - hypothetical protein, at 5,016,695 to 5,017,051
_22450
Position (kb)
5015
5016
5017 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 5014.360 kb on + strand, within AO356_22430 at 5014.367 kb on - strand, within AO356_22430 at 5014.369 kb on + strand, within AO356_22430 at 5014.419 kb on + strand, within AO356_22430 at 5014.658 kb on - strand at 5014.658 kb on - strand at 5014.726 kb on + strand at 5014.734 kb on + strand at 5014.735 kb on - strand at 5014.735 kb on - strand at 5014.769 kb on + strand at 5014.777 kb on + strand at 5014.778 kb on - strand at 5014.803 kb on + strand at 5014.804 kb on - strand at 5014.828 kb on + strand at 5014.828 kb on + strand at 5014.829 kb on - strand at 5015.046 kb on + strand, within AO356_22435 at 5015.046 kb on + strand, within AO356_22435 at 5015.046 kb on + strand, within AO356_22435 at 5015.046 kb on + strand, within AO356_22435 at 5015.047 kb on - strand, within AO356_22435 at 5015.151 kb on + strand, within AO356_22435 at 5015.151 kb on + strand, within AO356_22435 at 5015.151 kb on + strand, within AO356_22435 at 5015.151 kb on + strand, within AO356_22435 at 5015.152 kb on - strand, within AO356_22435 at 5015.152 kb on - strand, within AO356_22435 at 5015.152 kb on - strand, within AO356_22435 at 5015.152 kb on - strand, within AO356_22435 at 5015.156 kb on - strand, within AO356_22435 at 5015.201 kb on + strand at 5015.209 kb on - strand at 5015.239 kb on + strand at 5015.239 kb on + strand at 5015.240 kb on - strand at 5015.240 kb on - strand at 5015.262 kb on + strand at 5015.263 kb on - strand at 5015.271 kb on + strand at 5015.271 kb on + strand at 5015.272 kb on - strand at 5015.274 kb on + strand at 5015.295 kb on - strand at 5015.336 kb on + strand at 5015.336 kb on + strand at 5015.336 kb on + strand at 5015.336 kb on + strand at 5015.336 kb on + strand at 5015.336 kb on + strand at 5015.337 kb on - strand at 5015.337 kb on - strand at 5015.344 kb on - strand at 5015.487 kb on - strand, within AO356_22440 at 5015.630 kb on + strand, within AO356_22440 at 5015.631 kb on - strand, within AO356_22440 at 5015.631 kb on - strand, within AO356_22440 at 5015.631 kb on - strand, within AO356_22440 at 5015.631 kb on - strand, within AO356_22440 at 5015.665 kb on + strand, within AO356_22440 at 5015.769 kb on + strand, within AO356_22440 at 5015.770 kb on - strand, within AO356_22440 at 5015.770 kb on - strand, within AO356_22440 at 5015.770 kb on - strand, within AO356_22440 at 5015.770 kb on - strand, within AO356_22440 at 5015.780 kb on - strand, within AO356_22440 at 5015.894 kb on + strand, within AO356_22440 at 5015.894 kb on + strand, within AO356_22440 at 5015.894 kb on + strand, within AO356_22440 at 5015.895 kb on - strand, within AO356_22440 at 5015.895 kb on - strand, within AO356_22440 at 5015.895 kb on - strand, within AO356_22440 at 5015.902 kb on - strand, within AO356_22440 at 5015.976 kb on + strand, within AO356_22440 at 5016.085 kb on + strand, within AO356_22440 at 5016.085 kb on + strand, within AO356_22440 at 5016.086 kb on - strand, within AO356_22440 at 5016.086 kb on - strand, within AO356_22440 at 5016.086 kb on - strand, within AO356_22440 at 5016.086 kb on - strand, within AO356_22440 at 5016.248 kb on - strand at 5016.257 kb on + strand at 5016.267 kb on - strand at 5016.267 kb on - strand at 5016.267 kb on - strand at 5016.267 kb on - strand at 5016.267 kb on - strand at 5016.271 kb on - strand at 5016.271 kb on - strand at 5016.374 kb on + strand, within AO356_22445 at 5016.374 kb on + strand, within AO356_22445 at 5016.374 kb on + strand, within AO356_22445 at 5016.451 kb on + strand, within AO356_22445 at 5016.451 kb on + strand, within AO356_22445 at 5016.451 kb on + strand, within AO356_22445 at 5016.451 kb on + strand, within AO356_22445 at 5016.452 kb on - strand, within AO356_22445 at 5016.471 kb on + strand, within AO356_22445 at 5016.471 kb on + strand, within AO356_22445 at 5016.471 kb on + strand, within AO356_22445 at 5016.471 kb on + strand, within AO356_22445 at 5016.471 kb on + strand, within AO356_22445 at 5016.472 kb on - strand, within AO356_22445 at 5016.472 kb on - strand, within AO356_22445 at 5016.557 kb on + strand, within AO356_22445 at 5016.557 kb on + strand, within AO356_22445 at 5016.630 kb on + strand at 5016.630 kb on + strand at 5016.630 kb on + strand at 5016.630 kb on + strand at 5016.696 kb on + strand at 5016.843 kb on + strand, within AO356_22450 at 5016.912 kb on + strand, within AO356_22450 at 5016.912 kb on + strand, within AO356_22450 at 5016.932 kb on - strand, within AO356_22450 at 5016.932 kb on - strand, within AO356_22450 at 5016.932 kb on - strand, within AO356_22450 at 5016.932 kb on - strand, within AO356_22450 at 5017.011 kb on + strand, within AO356_22450 at 5017.011 kb on + strand, within AO356_22450 at 5017.011 kb on + strand, within AO356_22450 at 5017.012 kb on - strand, within AO356_22450 at 5017.023 kb on + strand at 5017.023 kb on + strand at 5017.070 kb on + strand at 5017.071 kb on - strand at 5017.071 kb on - strand at 5017.124 kb on + strand at 5017.125 kb on - strand at 5017.130 kb on + strand at 5017.130 kb on + strand at 5017.130 kb on + strand at 5017.131 kb on - strand at 5017.131 kb on - strand at 5017.131 kb on - strand at 5017.131 kb on - strand at 5017.184 kb on + strand at 5017.184 kb on + strand at 5017.184 kb on + strand at 5017.184 kb on + strand at 5017.185 kb on - strand at 5017.185 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.08 mM remove 5,014,360 + AO356_22430 0.61 +0.9 5,014,367 - AO356_22430 0.62 +0.1 5,014,369 + AO356_22430 0.63 -1.2 5,014,419 + AO356_22430 0.70 +0.1 5,014,658 - -0.9 5,014,658 - -0.6 5,014,726 + +0.2 5,014,734 + -2.0 5,014,735 - -2.3 5,014,735 - -0.4 5,014,769 + -0.0 5,014,777 + -0.1 5,014,778 - +0.1 5,014,803 + +0.3 5,014,804 - -0.5 5,014,828 + -1.7 5,014,828 + -0.7 5,014,829 - +0.4 5,015,046 + AO356_22435 0.58 +0.7 5,015,046 + AO356_22435 0.58 +0.1 5,015,046 + AO356_22435 0.58 -0.7 5,015,046 + AO356_22435 0.58 +0.5 5,015,047 - AO356_22435 0.59 +0.4 5,015,151 + AO356_22435 0.86 +1.1 5,015,151 + AO356_22435 0.86 -1.0 5,015,151 + AO356_22435 0.86 +1.5 5,015,151 + AO356_22435 0.86 -1.0 5,015,152 - AO356_22435 0.87 +1.2 5,015,152 - AO356_22435 0.87 -0.0 5,015,152 - AO356_22435 0.87 -1.2 5,015,152 - AO356_22435 0.87 +1.1 5,015,156 - AO356_22435 0.88 +0.9 5,015,201 + -1.0 5,015,209 - +0.7 5,015,239 + +0.4 5,015,239 + -0.4 5,015,240 - -0.4 5,015,240 - -0.4 5,015,262 + +1.5 5,015,263 - +0.4 5,015,271 + +1.1 5,015,271 + +0.4 5,015,272 - -1.1 5,015,274 + -0.2 5,015,295 - +0.1 5,015,336 + +0.2 5,015,336 + -1.1 5,015,336 + +0.5 5,015,336 + -0.3 5,015,336 + -0.2 5,015,336 + +0.3 5,015,337 - +0.8 5,015,337 - -0.4 5,015,344 - +0.1 5,015,487 - AO356_22440 0.19 +0.5 5,015,630 + AO356_22440 0.35 +0.1 5,015,631 - AO356_22440 0.35 +1.8 5,015,631 - AO356_22440 0.35 -1.0 5,015,631 - AO356_22440 0.35 +1.4 5,015,631 - AO356_22440 0.35 +0.4 5,015,665 + AO356_22440 0.38 -1.9 5,015,769 + AO356_22440 0.49 -0.9 5,015,770 - AO356_22440 0.50 +0.1 5,015,770 - AO356_22440 0.50 -0.4 5,015,770 - AO356_22440 0.50 +0.2 5,015,770 - AO356_22440 0.50 -1.0 5,015,780 - AO356_22440 0.51 +0.8 5,015,894 + AO356_22440 0.63 -0.4 5,015,894 + AO356_22440 0.63 +1.0 5,015,894 + AO356_22440 0.63 +0.3 5,015,895 - AO356_22440 0.63 -0.4 5,015,895 - AO356_22440 0.63 -0.5 5,015,895 - AO356_22440 0.63 +1.5 5,015,902 - AO356_22440 0.64 +0.3 5,015,976 + AO356_22440 0.72 -0.8 5,016,085 + AO356_22440 0.83 +1.1 5,016,085 + AO356_22440 0.83 +1.2 5,016,086 - AO356_22440 0.83 -0.7 5,016,086 - AO356_22440 0.83 +1.1 5,016,086 - AO356_22440 0.83 -0.8 5,016,086 - AO356_22440 0.83 +0.0 5,016,248 - -0.3 5,016,257 + +0.3 5,016,267 - +0.4 5,016,267 - +0.6 5,016,267 - -0.7 5,016,267 - +0.5 5,016,267 - +0.2 5,016,271 - +1.4 5,016,271 - +0.2 5,016,374 + AO356_22445 0.25 +0.2 5,016,374 + AO356_22445 0.25 +0.9 5,016,374 + AO356_22445 0.25 +0.2 5,016,451 + AO356_22445 0.47 -1.2 5,016,451 + AO356_22445 0.47 +1.0 5,016,451 + AO356_22445 0.47 -0.3 5,016,451 + AO356_22445 0.47 +0.4 5,016,452 - AO356_22445 0.48 +0.3 5,016,471 + AO356_22445 0.53 -0.4 5,016,471 + AO356_22445 0.53 +1.4 5,016,471 + AO356_22445 0.53 -0.1 5,016,471 + AO356_22445 0.53 +1.3 5,016,471 + AO356_22445 0.53 +1.2 5,016,472 - AO356_22445 0.53 -1.2 5,016,472 - AO356_22445 0.53 +0.4 5,016,557 + AO356_22445 0.78 -1.0 5,016,557 + AO356_22445 0.78 +0.3 5,016,630 + -0.3 5,016,630 + -1.7 5,016,630 + -1.0 5,016,630 + -0.7 5,016,696 + +1.8 5,016,843 + AO356_22450 0.41 +0.4 5,016,912 + AO356_22450 0.61 -1.8 5,016,912 + AO356_22450 0.61 -0.7 5,016,932 - AO356_22450 0.66 +0.4 5,016,932 - AO356_22450 0.66 -1.8 5,016,932 - AO356_22450 0.66 +0.8 5,016,932 - AO356_22450 0.66 +0.1 5,017,011 + AO356_22450 0.89 -0.5 5,017,011 + AO356_22450 0.89 -0.4 5,017,011 + AO356_22450 0.89 -0.9 5,017,012 - AO356_22450 0.89 -0.2 5,017,023 + +0.6 5,017,023 + +0.5 5,017,070 + -1.5 5,017,071 - -0.0 5,017,071 - +1.2 5,017,124 + +0.9 5,017,125 - +0.5 5,017,130 + +2.8 5,017,130 + -0.4 5,017,130 + -0.4 5,017,131 - +0.3 5,017,131 - -0.3 5,017,131 - -0.0 5,017,131 - +0.5 5,017,184 + +0.9 5,017,184 + -1.8 5,017,184 + -0.0 5,017,184 + -0.4 5,017,185 - +0.3 5,017,185 - -0.4
Or see this region's nucleotide sequence