Experiment: Chlorite 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_19225 and AO356_19230 are separated by 237 nucleotides AO356_19230 and AO356_19235 are separated by 103 nucleotides
AO356_19225: AO356_19225 - histidine kinase, at 4,314,787 to 4,318,257
_19225
AO356_19230: AO356_19230 - TetR family transcriptional regulator, at 4,318,495 to 4,319,034
_19230
AO356_19235: AO356_19235 - MFS transporter, at 4,319,138 to 4,320,328
_19235
Position (kb) 4318
4319
4320 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4317.551 kb on + strand, within AO356_19225 at 4317.552 kb on - strand, within AO356_19225 at 4317.552 kb on - strand, within AO356_19225 at 4317.552 kb on - strand, within AO356_19225 at 4317.552 kb on - strand, within AO356_19225 at 4317.608 kb on + strand, within AO356_19225 at 4317.608 kb on + strand, within AO356_19225 at 4317.609 kb on - strand, within AO356_19225 at 4317.617 kb on + strand, within AO356_19225 at 4317.617 kb on + strand, within AO356_19225 at 4317.618 kb on - strand, within AO356_19225 at 4317.618 kb on - strand, within AO356_19225 at 4317.618 kb on - strand, within AO356_19225 at 4317.618 kb on - strand, within AO356_19225 at 4317.867 kb on - strand, within AO356_19225 at 4317.867 kb on - strand, within AO356_19225 at 4317.867 kb on - strand, within AO356_19225 at 4317.867 kb on - strand, within AO356_19225 at 4318.040 kb on + strand at 4318.041 kb on - strand at 4318.041 kb on - strand at 4318.041 kb on - strand at 4318.044 kb on + strand at 4318.044 kb on + strand at 4318.044 kb on + strand at 4318.045 kb on - strand at 4318.045 kb on - strand at 4318.045 kb on - strand at 4318.112 kb on + strand at 4318.112 kb on + strand at 4318.112 kb on + strand at 4318.112 kb on + strand at 4318.112 kb on + strand at 4318.112 kb on + strand at 4318.113 kb on - strand at 4318.113 kb on - strand at 4318.113 kb on - strand at 4318.113 kb on - strand at 4318.133 kb on + strand at 4318.212 kb on + strand at 4318.213 kb on - strand at 4318.214 kb on + strand at 4318.214 kb on + strand at 4318.214 kb on + strand at 4318.214 kb on + strand at 4318.214 kb on + strand at 4318.214 kb on + strand at 4318.214 kb on + strand at 4318.214 kb on + strand at 4318.214 kb on + strand at 4318.215 kb on - strand at 4318.215 kb on - strand at 4318.215 kb on - strand at 4318.215 kb on - strand at 4318.215 kb on - strand at 4318.215 kb on - strand at 4318.373 kb on - strand at 4318.444 kb on + strand at 4318.444 kb on + strand at 4318.445 kb on - strand at 4318.445 kb on - strand at 4318.445 kb on - strand at 4318.445 kb on - strand at 4318.445 kb on - strand at 4318.445 kb on - strand at 4318.526 kb on + strand at 4318.527 kb on - strand at 4318.675 kb on + strand, within AO356_19230 at 4318.682 kb on + strand, within AO356_19230 at 4318.683 kb on - strand, within AO356_19230 at 4318.683 kb on - strand, within AO356_19230 at 4318.683 kb on - strand, within AO356_19230 at 4318.723 kb on - strand, within AO356_19230 at 4318.723 kb on - strand, within AO356_19230 at 4318.754 kb on + strand, within AO356_19230 at 4318.755 kb on - strand, within AO356_19230 at 4318.877 kb on + strand, within AO356_19230 at 4318.881 kb on + strand, within AO356_19230 at 4318.881 kb on + strand, within AO356_19230 at 4319.014 kb on + strand at 4319.014 kb on + strand at 4319.015 kb on - strand at 4319.015 kb on - strand at 4319.015 kb on - strand at 4319.025 kb on + strand at 4319.025 kb on + strand at 4319.025 kb on + strand at 4319.025 kb on + strand at 4319.026 kb on - strand at 4319.026 kb on - strand at 4319.026 kb on - strand at 4319.026 kb on - strand at 4319.026 kb on - strand at 4319.026 kb on - strand at 4319.028 kb on + strand at 4319.028 kb on + strand at 4319.028 kb on + strand at 4319.046 kb on + strand at 4319.185 kb on + strand at 4319.185 kb on + strand at 4319.186 kb on - strand at 4319.231 kb on + strand at 4319.231 kb on + strand at 4319.231 kb on + strand at 4319.231 kb on + strand at 4319.232 kb on - strand at 4319.232 kb on - strand at 4319.232 kb on - strand at 4319.232 kb on - strand at 4319.240 kb on + strand at 4319.241 kb on - strand at 4319.241 kb on - strand at 4319.253 kb on + strand at 4319.253 kb on + strand at 4319.253 kb on + strand at 4319.254 kb on - strand at 4319.254 kb on - strand at 4319.254 kb on - strand at 4319.254 kb on - strand at 4319.294 kb on + strand, within AO356_19235 at 4319.294 kb on + strand, within AO356_19235 at 4319.294 kb on + strand, within AO356_19235 at 4319.294 kb on + strand, within AO356_19235 at 4319.294 kb on + strand, within AO356_19235 at 4319.345 kb on + strand, within AO356_19235 at 4319.345 kb on + strand, within AO356_19235 at 4319.346 kb on - strand, within AO356_19235 at 4319.391 kb on + strand, within AO356_19235 at 4319.391 kb on + strand, within AO356_19235 at 4319.392 kb on - strand, within AO356_19235 at 4319.410 kb on + strand, within AO356_19235 at 4319.410 kb on + strand, within AO356_19235 at 4319.487 kb on + strand, within AO356_19235 at 4319.487 kb on + strand, within AO356_19235 at 4319.487 kb on + strand, within AO356_19235 at 4319.488 kb on - strand, within AO356_19235 at 4319.488 kb on - strand, within AO356_19235 at 4319.488 kb on - strand, within AO356_19235 at 4319.488 kb on - strand, within AO356_19235 at 4319.539 kb on + strand, within AO356_19235 at 4319.627 kb on + strand, within AO356_19235 at 4319.627 kb on + strand, within AO356_19235 at 4319.628 kb on - strand, within AO356_19235 at 4319.667 kb on - strand, within AO356_19235 at 4319.813 kb on + strand, within AO356_19235 at 4319.921 kb on + strand, within AO356_19235 at 4319.921 kb on + strand, within AO356_19235 at 4319.921 kb on + strand, within AO356_19235 at 4319.921 kb on + strand, within AO356_19235 at 4319.921 kb on + strand, within AO356_19235 at 4319.922 kb on - strand, within AO356_19235 at 4319.922 kb on - strand, within AO356_19235 at 4319.922 kb on - strand, within AO356_19235 at 4319.922 kb on - strand, within AO356_19235 at 4319.922 kb on - strand, within AO356_19235 at 4319.922 kb on - strand, within AO356_19235 at 4319.952 kb on + strand, within AO356_19235 at 4319.952 kb on + strand, within AO356_19235 at 4319.952 kb on + strand, within AO356_19235 at 4319.952 kb on + strand, within AO356_19235 at 4319.952 kb on + strand, within AO356_19235 at 4319.953 kb on - strand, within AO356_19235
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.08 mM remove 4,317,551 + AO356_19225 0.80 -0.5 4,317,552 - AO356_19225 0.80 +1.6 4,317,552 - AO356_19225 0.80 -0.6 4,317,552 - AO356_19225 0.80 -0.7 4,317,552 - AO356_19225 0.80 -0.1 4,317,608 + AO356_19225 0.81 +0.3 4,317,608 + AO356_19225 0.81 -0.1 4,317,609 - AO356_19225 0.81 -0.6 4,317,617 + AO356_19225 0.82 +0.1 4,317,617 + AO356_19225 0.82 -0.9 4,317,618 - AO356_19225 0.82 +0.1 4,317,618 - AO356_19225 0.82 -0.3 4,317,618 - AO356_19225 0.82 -1.5 4,317,618 - AO356_19225 0.82 -0.4 4,317,867 - AO356_19225 0.89 +0.9 4,317,867 - AO356_19225 0.89 +0.4 4,317,867 - AO356_19225 0.89 -0.6 4,317,867 - AO356_19225 0.89 -1.1 4,318,040 + +0.2 4,318,041 - +0.9 4,318,041 - +0.5 4,318,041 - -1.8 4,318,044 + +0.2 4,318,044 + -1.1 4,318,044 + -0.7 4,318,045 - -0.4 4,318,045 - -0.2 4,318,045 - +0.1 4,318,112 + -0.5 4,318,112 + -1.4 4,318,112 + -0.1 4,318,112 + +0.2 4,318,112 + +0.4 4,318,112 + -0.8 4,318,113 - -0.2 4,318,113 - -0.2 4,318,113 - -1.1 4,318,113 - +0.5 4,318,133 + -1.2 4,318,212 + +0.5 4,318,213 - +0.5 4,318,214 + +0.5 4,318,214 + +0.6 4,318,214 + +0.9 4,318,214 + +0.2 4,318,214 + +0.4 4,318,214 + -1.0 4,318,214 + +0.2 4,318,214 + -1.4 4,318,214 + -0.3 4,318,215 - -0.9 4,318,215 - +0.4 4,318,215 - +0.3 4,318,215 - -1.1 4,318,215 - -0.0 4,318,215 - -0.6 4,318,373 - +1.4 4,318,444 + -0.0 4,318,444 + -0.7 4,318,445 - +1.2 4,318,445 - +0.8 4,318,445 - +0.9 4,318,445 - +0.1 4,318,445 - +0.2 4,318,445 - +0.6 4,318,526 + -1.2 4,318,527 - -0.9 4,318,675 + AO356_19230 0.33 +0.1 4,318,682 + AO356_19230 0.35 +0.4 4,318,683 - AO356_19230 0.35 +0.3 4,318,683 - AO356_19230 0.35 -0.3 4,318,683 - AO356_19230 0.35 +0.1 4,318,723 - AO356_19230 0.42 -0.0 4,318,723 - AO356_19230 0.42 +0.6 4,318,754 + AO356_19230 0.48 +0.3 4,318,755 - AO356_19230 0.48 -0.1 4,318,877 + AO356_19230 0.71 -0.3 4,318,881 + AO356_19230 0.71 +1.4 4,318,881 + AO356_19230 0.71 -1.4 4,319,014 + -0.4 4,319,014 + +1.0 4,319,015 - -0.5 4,319,015 - +0.6 4,319,015 - +0.4 4,319,025 + +1.9 4,319,025 + -1.1 4,319,025 + +0.0 4,319,025 + -0.5 4,319,026 - +0.3 4,319,026 - +0.9 4,319,026 - -0.6 4,319,026 - +0.3 4,319,026 - -1.7 4,319,026 - +0.3 4,319,028 + +0.5 4,319,028 + -0.8 4,319,028 + +0.6 4,319,046 + +0.3 4,319,185 + +0.1 4,319,185 + -0.3 4,319,186 - -0.3 4,319,231 + +1.1 4,319,231 + +0.6 4,319,231 + -0.7 4,319,231 + -0.9 4,319,232 - -0.6 4,319,232 - +0.2 4,319,232 - -0.3 4,319,232 - -1.5 4,319,240 + -1.7 4,319,241 - +0.2 4,319,241 - -0.8 4,319,253 + -0.2 4,319,253 + +0.3 4,319,253 + -0.5 4,319,254 - -0.2 4,319,254 - +0.5 4,319,254 - -1.4 4,319,254 - +0.4 4,319,294 + AO356_19235 0.13 +0.1 4,319,294 + AO356_19235 0.13 +0.2 4,319,294 + AO356_19235 0.13 +0.9 4,319,294 + AO356_19235 0.13 -0.3 4,319,294 + AO356_19235 0.13 -0.1 4,319,345 + AO356_19235 0.17 -0.6 4,319,345 + AO356_19235 0.17 -0.1 4,319,346 - AO356_19235 0.17 -0.0 4,319,391 + AO356_19235 0.21 -0.5 4,319,391 + AO356_19235 0.21 -0.4 4,319,392 - AO356_19235 0.21 -0.6 4,319,410 + AO356_19235 0.23 -0.0 4,319,410 + AO356_19235 0.23 -1.8 4,319,487 + AO356_19235 0.29 +0.3 4,319,487 + AO356_19235 0.29 -0.7 4,319,487 + AO356_19235 0.29 -1.6 4,319,488 - AO356_19235 0.29 -0.4 4,319,488 - AO356_19235 0.29 -0.6 4,319,488 - AO356_19235 0.29 +0.2 4,319,488 - AO356_19235 0.29 -0.1 4,319,539 + AO356_19235 0.34 +0.2 4,319,627 + AO356_19235 0.41 +0.9 4,319,627 + AO356_19235 0.41 -1.1 4,319,628 - AO356_19235 0.41 -1.5 4,319,667 - AO356_19235 0.44 -0.2 4,319,813 + AO356_19235 0.57 -1.1 4,319,921 + AO356_19235 0.66 +1.0 4,319,921 + AO356_19235 0.66 +0.8 4,319,921 + AO356_19235 0.66 -0.5 4,319,921 + AO356_19235 0.66 -0.8 4,319,921 + AO356_19235 0.66 -0.7 4,319,922 - AO356_19235 0.66 +0.6 4,319,922 - AO356_19235 0.66 +0.2 4,319,922 - AO356_19235 0.66 -0.5 4,319,922 - AO356_19235 0.66 -0.7 4,319,922 - AO356_19235 0.66 +0.1 4,319,922 - AO356_19235 0.66 +0.7 4,319,952 + AO356_19235 0.68 +0.1 4,319,952 + AO356_19235 0.68 +0.5 4,319,952 + AO356_19235 0.68 -0.3 4,319,952 + AO356_19235 0.68 +1.4 4,319,952 + AO356_19235 0.68 +0.2 4,319,953 - AO356_19235 0.68 +0.6
Or see this region's nucleotide sequence