Experiment: Chlorite 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_16615 and AO356_16620 are separated by 367 nucleotides AO356_16620 and AO356_16625 are separated by 222 nucleotides AO356_16625 and AO356_16630 are separated by 139 nucleotides AO356_16630 and AO356_16635 are separated by 10 nucleotides AO356_16635 and AO356_16640 are separated by 39 nucleotides
AO356_16615: AO356_16615 - hypothetical protein, at 3,749,846 to 3,750,052
_16615
AO356_16620: AO356_16620 - hypothetical protein, at 3,750,420 to 3,750,701
_16620
AO356_16625: AO356_16625 - glycerol acyltransferase, at 3,750,924 to 3,752,090
_16625
AO356_16630: AO356_16630 - hypothetical protein, at 3,752,230 to 3,752,412
_16630
AO356_16635: AO356_16635 - hypothetical protein, at 3,752,423 to 3,752,683
_16635
AO356_16640: AO356_16640 - hypothetical protein, at 3,752,723 to 3,753,346
_16640
Position (kb)
3750
3751
3752
3753 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3749.940 kb on + strand, within AO356_16615 at 3749.940 kb on + strand, within AO356_16615 at 3749.941 kb on - strand, within AO356_16615 at 3749.941 kb on - strand, within AO356_16615 at 3750.021 kb on + strand, within AO356_16615 at 3750.021 kb on + strand, within AO356_16615 at 3750.021 kb on + strand, within AO356_16615 at 3750.022 kb on - strand, within AO356_16615 at 3750.022 kb on - strand, within AO356_16615 at 3750.092 kb on + strand at 3750.092 kb on + strand at 3750.092 kb on + strand at 3750.093 kb on - strand at 3750.093 kb on - strand at 3750.196 kb on + strand at 3750.264 kb on + strand at 3750.264 kb on + strand at 3750.264 kb on + strand at 3750.264 kb on + strand at 3750.264 kb on + strand at 3750.265 kb on - strand at 3750.265 kb on - strand at 3750.265 kb on - strand at 3750.371 kb on + strand at 3750.372 kb on - strand at 3750.372 kb on - strand at 3750.511 kb on + strand, within AO356_16620 at 3750.690 kb on - strand at 3750.707 kb on + strand at 3750.707 kb on + strand at 3750.707 kb on + strand at 3750.707 kb on + strand at 3750.707 kb on + strand at 3750.707 kb on + strand at 3750.707 kb on + strand at 3750.707 kb on + strand at 3750.708 kb on - strand at 3750.925 kb on + strand at 3750.926 kb on - strand at 3752.117 kb on - strand at 3752.117 kb on - strand at 3752.117 kb on - strand at 3752.117 kb on - strand at 3752.121 kb on - strand at 3752.121 kb on - strand at 3752.121 kb on - strand at 3752.121 kb on - strand at 3752.121 kb on - strand at 3752.121 kb on - strand at 3752.163 kb on - strand at 3752.163 kb on - strand at 3752.163 kb on - strand at 3752.163 kb on - strand at 3752.163 kb on - strand at 3752.190 kb on - strand at 3752.190 kb on - strand at 3752.190 kb on - strand at 3752.190 kb on - strand at 3752.190 kb on - strand at 3752.202 kb on - strand at 3752.202 kb on - strand at 3752.202 kb on - strand at 3752.204 kb on - strand at 3752.204 kb on - strand at 3752.204 kb on - strand at 3752.248 kb on + strand at 3752.249 kb on - strand, within AO356_16630 at 3752.249 kb on - strand, within AO356_16630 at 3752.249 kb on - strand, within AO356_16630 at 3752.249 kb on - strand, within AO356_16630 at 3752.249 kb on - strand, within AO356_16630 at 3752.249 kb on - strand, within AO356_16630 at 3752.260 kb on + strand, within AO356_16630 at 3752.314 kb on + strand, within AO356_16630 at 3752.314 kb on + strand, within AO356_16630 at 3752.314 kb on + strand, within AO356_16630 at 3752.314 kb on + strand, within AO356_16630 at 3752.314 kb on + strand, within AO356_16630 at 3752.314 kb on + strand, within AO356_16630 at 3752.314 kb on + strand, within AO356_16630 at 3752.315 kb on - strand, within AO356_16630 at 3752.315 kb on - strand, within AO356_16630 at 3752.315 kb on - strand, within AO356_16630 at 3752.315 kb on - strand, within AO356_16630 at 3752.436 kb on - strand at 3752.436 kb on - strand at 3752.594 kb on + strand, within AO356_16635 at 3752.595 kb on - strand, within AO356_16635 at 3752.595 kb on - strand, within AO356_16635 at 3752.618 kb on + strand, within AO356_16635 at 3752.619 kb on - strand, within AO356_16635 at 3752.619 kb on - strand, within AO356_16635 at 3752.619 kb on - strand, within AO356_16635 at 3752.619 kb on - strand, within AO356_16635 at 3752.660 kb on + strand at 3752.681 kb on + strand at 3752.681 kb on + strand at 3752.735 kb on + strand at 3752.736 kb on - strand at 3752.809 kb on + strand, within AO356_16640
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.08 mM remove 3,749,940 + AO356_16615 0.45 -0.2 3,749,940 + AO356_16615 0.45 +0.3 3,749,941 - AO356_16615 0.46 +0.3 3,749,941 - AO356_16615 0.46 +0.7 3,750,021 + AO356_16615 0.85 -0.3 3,750,021 + AO356_16615 0.85 -1.3 3,750,021 + AO356_16615 0.85 +0.3 3,750,022 - AO356_16615 0.85 +0.7 3,750,022 - AO356_16615 0.85 +0.3 3,750,092 + -0.3 3,750,092 + +0.7 3,750,092 + +1.9 3,750,093 - -0.7 3,750,093 - -0.3 3,750,196 + +0.8 3,750,264 + -0.8 3,750,264 + +1.1 3,750,264 + -0.4 3,750,264 + -0.4 3,750,264 + +0.8 3,750,265 - -1.2 3,750,265 - -0.9 3,750,265 - +1.1 3,750,371 + -1.0 3,750,372 - -0.2 3,750,372 - +0.7 3,750,511 + AO356_16620 0.32 +1.0 3,750,690 - +1.2 3,750,707 + -0.5 3,750,707 + -1.1 3,750,707 + -0.3 3,750,707 + +0.3 3,750,707 + +0.4 3,750,707 + +0.9 3,750,707 + +0.8 3,750,707 + -0.0 3,750,708 - +0.8 3,750,925 + -1.8 3,750,926 - +0.6 3,752,117 - -1.6 3,752,117 - -0.3 3,752,117 - +1.1 3,752,117 - -1.2 3,752,121 - -1.2 3,752,121 - +1.1 3,752,121 - -1.7 3,752,121 - +0.4 3,752,121 - +1.5 3,752,121 - -1.3 3,752,163 - +0.2 3,752,163 - +1.2 3,752,163 - +0.8 3,752,163 - +0.2 3,752,163 - +0.3 3,752,190 - +0.5 3,752,190 - +1.3 3,752,190 - +1.1 3,752,190 - +0.8 3,752,190 - +0.3 3,752,202 - +0.2 3,752,202 - +0.1 3,752,202 - -0.2 3,752,204 - -0.1 3,752,204 - +0.5 3,752,204 - +0.9 3,752,248 + -1.1 3,752,249 - AO356_16630 0.10 +1.2 3,752,249 - AO356_16630 0.10 -0.8 3,752,249 - AO356_16630 0.10 +1.0 3,752,249 - AO356_16630 0.10 +0.4 3,752,249 - AO356_16630 0.10 +1.3 3,752,249 - AO356_16630 0.10 +0.6 3,752,260 + AO356_16630 0.16 -0.9 3,752,314 + AO356_16630 0.46 -0.3 3,752,314 + AO356_16630 0.46 -1.7 3,752,314 + AO356_16630 0.46 -0.8 3,752,314 + AO356_16630 0.46 +0.1 3,752,314 + AO356_16630 0.46 -1.7 3,752,314 + AO356_16630 0.46 +0.2 3,752,314 + AO356_16630 0.46 -1.6 3,752,315 - AO356_16630 0.46 +0.6 3,752,315 - AO356_16630 0.46 +0.0 3,752,315 - AO356_16630 0.46 +1.5 3,752,315 - AO356_16630 0.46 +1.3 3,752,436 - -1.2 3,752,436 - -0.2 3,752,594 + AO356_16635 0.66 -0.8 3,752,595 - AO356_16635 0.66 +0.2 3,752,595 - AO356_16635 0.66 +0.1 3,752,618 + AO356_16635 0.75 +0.1 3,752,619 - AO356_16635 0.75 -0.5 3,752,619 - AO356_16635 0.75 -0.5 3,752,619 - AO356_16635 0.75 -0.5 3,752,619 - AO356_16635 0.75 -0.3 3,752,660 + +0.7 3,752,681 + +0.3 3,752,681 + +0.4 3,752,735 + -1.4 3,752,736 - +1.1 3,752,809 + AO356_16640 0.14 +0.0
Or see this region's nucleotide sequence