Experiment: Chlorite 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_16400 and AO356_16405 are separated by 66 nucleotides AO356_16405 and AO356_16410 are separated by 497 nucleotides
AO356_16400: AO356_16400 - Fosmidomycin resistance protein, at 3,705,079 to 3,706,296
_16400
AO356_16405: AO356_16405 - hypothetical protein, at 3,706,363 to 3,707,424
_16405
AO356_16410: AO356_16410 - chemotaxis protein, at 3,707,922 to 3,710,108
_16410
Position (kb)
3706
3707
3708 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3705.428 kb on + strand, within AO356_16400 at 3705.428 kb on + strand, within AO356_16400 at 3705.429 kb on - strand, within AO356_16400 at 3705.429 kb on - strand, within AO356_16400 at 3705.602 kb on - strand, within AO356_16400 at 3705.661 kb on + strand, within AO356_16400 at 3705.738 kb on - strand, within AO356_16400 at 3705.796 kb on + strand, within AO356_16400 at 3705.796 kb on + strand, within AO356_16400 at 3705.796 kb on + strand, within AO356_16400 at 3705.797 kb on - strand, within AO356_16400 at 3705.802 kb on + strand, within AO356_16400 at 3705.802 kb on + strand, within AO356_16400 at 3705.802 kb on + strand, within AO356_16400 at 3705.802 kb on + strand, within AO356_16400 at 3705.802 kb on + strand, within AO356_16400 at 3705.802 kb on + strand, within AO356_16400 at 3705.802 kb on + strand, within AO356_16400 at 3705.802 kb on + strand, within AO356_16400 at 3705.802 kb on + strand, within AO356_16400 at 3705.802 kb on + strand, within AO356_16400 at 3705.803 kb on - strand, within AO356_16400 at 3705.803 kb on - strand, within AO356_16400 at 3705.803 kb on - strand, within AO356_16400 at 3705.803 kb on - strand, within AO356_16400 at 3705.803 kb on - strand, within AO356_16400 at 3705.803 kb on - strand, within AO356_16400 at 3705.803 kb on - strand, within AO356_16400 at 3705.803 kb on - strand, within AO356_16400 at 3705.803 kb on - strand, within AO356_16400 at 3705.803 kb on - strand, within AO356_16400 at 3705.823 kb on + strand, within AO356_16400 at 3705.823 kb on + strand, within AO356_16400 at 3705.823 kb on + strand, within AO356_16400 at 3705.824 kb on - strand, within AO356_16400 at 3705.824 kb on - strand, within AO356_16400 at 3705.824 kb on - strand, within AO356_16400 at 3705.835 kb on + strand, within AO356_16400 at 3705.836 kb on - strand, within AO356_16400 at 3705.836 kb on - strand, within AO356_16400 at 3705.836 kb on - strand, within AO356_16400 at 3705.880 kb on + strand, within AO356_16400 at 3705.880 kb on + strand, within AO356_16400 at 3705.880 kb on + strand, within AO356_16400 at 3705.880 kb on + strand, within AO356_16400 at 3705.880 kb on + strand, within AO356_16400 at 3705.881 kb on - strand, within AO356_16400 at 3705.881 kb on - strand, within AO356_16400 at 3705.881 kb on - strand, within AO356_16400 at 3705.881 kb on - strand, within AO356_16400 at 3705.881 kb on - strand, within AO356_16400 at 3706.093 kb on + strand, within AO356_16400 at 3706.094 kb on - strand, within AO356_16400 at 3706.094 kb on - strand, within AO356_16400 at 3706.219 kb on + strand at 3706.219 kb on + strand at 3706.219 kb on + strand at 3706.219 kb on + strand at 3706.219 kb on + strand at 3706.219 kb on + strand at 3706.219 kb on + strand at 3706.219 kb on + strand at 3706.219 kb on + strand at 3706.219 kb on + strand at 3706.219 kb on + strand at 3706.220 kb on - strand at 3706.220 kb on - strand at 3706.220 kb on - strand at 3706.220 kb on - strand at 3706.220 kb on - strand at 3706.220 kb on - strand at 3706.220 kb on - strand at 3706.225 kb on + strand at 3706.225 kb on + strand at 3706.225 kb on + strand at 3706.225 kb on + strand at 3706.225 kb on + strand at 3706.225 kb on + strand at 3706.225 kb on + strand at 3706.226 kb on - strand at 3706.226 kb on - strand at 3706.226 kb on - strand at 3706.226 kb on - strand at 3706.226 kb on - strand at 3706.226 kb on - strand at 3706.285 kb on - strand at 3706.368 kb on + strand at 3706.374 kb on + strand at 3706.375 kb on - strand at 3706.507 kb on + strand, within AO356_16405 at 3706.507 kb on + strand, within AO356_16405 at 3706.507 kb on + strand, within AO356_16405 at 3706.507 kb on + strand, within AO356_16405 at 3706.508 kb on - strand, within AO356_16405 at 3706.508 kb on - strand, within AO356_16405 at 3706.508 kb on - strand, within AO356_16405 at 3706.508 kb on - strand, within AO356_16405 at 3706.508 kb on - strand, within AO356_16405 at 3706.508 kb on - strand, within AO356_16405 at 3706.576 kb on + strand, within AO356_16405 at 3706.576 kb on + strand, within AO356_16405 at 3706.576 kb on + strand, within AO356_16405 at 3706.576 kb on + strand, within AO356_16405 at 3706.576 kb on + strand, within AO356_16405 at 3706.576 kb on + strand, within AO356_16405 at 3706.576 kb on + strand, within AO356_16405 at 3706.577 kb on - strand, within AO356_16405 at 3706.670 kb on - strand, within AO356_16405 at 3706.678 kb on + strand, within AO356_16405 at 3706.679 kb on - strand, within AO356_16405 at 3706.791 kb on + strand, within AO356_16405 at 3706.791 kb on + strand, within AO356_16405 at 3706.792 kb on - strand, within AO356_16405 at 3706.792 kb on - strand, within AO356_16405 at 3706.792 kb on - strand, within AO356_16405 at 3706.792 kb on - strand, within AO356_16405 at 3706.792 kb on - strand, within AO356_16405 at 3706.806 kb on + strand, within AO356_16405 at 3706.807 kb on - strand, within AO356_16405 at 3706.884 kb on + strand, within AO356_16405 at 3706.885 kb on - strand, within AO356_16405 at 3706.885 kb on - strand, within AO356_16405 at 3706.885 kb on - strand, within AO356_16405 at 3706.987 kb on + strand, within AO356_16405 at 3707.164 kb on - strand, within AO356_16405 at 3707.326 kb on - strand at 3707.413 kb on + strand at 3707.413 kb on + strand at 3707.414 kb on - strand at 3707.495 kb on - strand at 3707.505 kb on + strand at 3707.516 kb on - strand at 3707.524 kb on + strand at 3707.556 kb on + strand at 3707.601 kb on - strand at 3707.622 kb on + strand at 3707.657 kb on + strand at 3707.658 kb on - strand at 3707.666 kb on + strand at 3707.667 kb on - strand at 3707.681 kb on + strand at 3707.682 kb on - strand at 3707.682 kb on - strand at 3707.682 kb on - strand at 3707.706 kb on + strand at 3707.706 kb on + strand at 3707.707 kb on - strand at 3707.712 kb on + strand at 3707.713 kb on - strand at 3707.713 kb on - strand at 3707.713 kb on - strand at 3707.731 kb on + strand at 3707.732 kb on - strand at 3707.773 kb on - strand at 3707.773 kb on - strand at 3707.774 kb on + strand at 3707.870 kb on - strand at 3707.870 kb on - strand at 3707.897 kb on + strand at 3707.901 kb on + strand at 3707.902 kb on - strand at 3707.921 kb on + strand at 3707.922 kb on - strand at 3708.004 kb on - strand at 3708.036 kb on + strand at 3708.036 kb on + strand at 3708.036 kb on + strand at 3708.036 kb on + strand at 3708.036 kb on + strand at 3708.036 kb on + strand at 3708.037 kb on - strand at 3708.037 kb on - strand at 3708.037 kb on - strand at 3708.037 kb on - strand at 3708.037 kb on - strand at 3708.235 kb on + strand, within AO356_16410 at 3708.236 kb on - strand, within AO356_16410 at 3708.236 kb on - strand, within AO356_16410 at 3708.236 kb on - strand, within AO356_16410 at 3708.279 kb on + strand, within AO356_16410 at 3708.279 kb on + strand, within AO356_16410 at 3708.279 kb on + strand, within AO356_16410 at 3708.279 kb on + strand, within AO356_16410 at 3708.279 kb on + strand, within AO356_16410 at 3708.279 kb on + strand, within AO356_16410 at 3708.280 kb on - strand, within AO356_16410 at 3708.280 kb on - strand, within AO356_16410 at 3708.280 kb on - strand, within AO356_16410 at 3708.280 kb on - strand, within AO356_16410 at 3708.280 kb on - strand, within AO356_16410 at 3708.280 kb on - strand, within AO356_16410 at 3708.280 kb on - strand, within AO356_16410 at 3708.280 kb on - strand, within AO356_16410 at 3708.280 kb on - strand, within AO356_16410 at 3708.280 kb on - strand, within AO356_16410 at 3708.347 kb on + strand, within AO356_16410 at 3708.347 kb on + strand, within AO356_16410 at 3708.347 kb on + strand, within AO356_16410 at 3708.348 kb on - strand, within AO356_16410
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.08 mM remove 3,705,428 + AO356_16400 0.29 -0.7 3,705,428 + AO356_16400 0.29 +0.4 3,705,429 - AO356_16400 0.29 -1.2 3,705,429 - AO356_16400 0.29 +0.0 3,705,602 - AO356_16400 0.43 +0.7 3,705,661 + AO356_16400 0.48 +0.2 3,705,738 - AO356_16400 0.54 +0.5 3,705,796 + AO356_16400 0.59 -1.1 3,705,796 + AO356_16400 0.59 -0.2 3,705,796 + AO356_16400 0.59 +0.7 3,705,797 - AO356_16400 0.59 -2.6 3,705,802 + AO356_16400 0.59 +0.5 3,705,802 + AO356_16400 0.59 -0.1 3,705,802 + AO356_16400 0.59 -0.7 3,705,802 + AO356_16400 0.59 -0.1 3,705,802 + AO356_16400 0.59 -0.8 3,705,802 + AO356_16400 0.59 -0.5 3,705,802 + AO356_16400 0.59 +0.3 3,705,802 + AO356_16400 0.59 -0.5 3,705,802 + AO356_16400 0.59 -0.5 3,705,802 + AO356_16400 0.59 -0.2 3,705,803 - AO356_16400 0.59 +0.5 3,705,803 - AO356_16400 0.59 -0.1 3,705,803 - AO356_16400 0.59 -0.5 3,705,803 - AO356_16400 0.59 -0.1 3,705,803 - AO356_16400 0.59 +1.2 3,705,803 - AO356_16400 0.59 +1.0 3,705,803 - AO356_16400 0.59 -0.9 3,705,803 - AO356_16400 0.59 +0.2 3,705,803 - AO356_16400 0.59 -0.3 3,705,803 - AO356_16400 0.59 +0.8 3,705,823 + AO356_16400 0.61 -0.1 3,705,823 + AO356_16400 0.61 +0.8 3,705,823 + AO356_16400 0.61 +1.2 3,705,824 - AO356_16400 0.61 +0.4 3,705,824 - AO356_16400 0.61 +0.2 3,705,824 - AO356_16400 0.61 +0.3 3,705,835 + AO356_16400 0.62 -0.2 3,705,836 - AO356_16400 0.62 -0.1 3,705,836 - AO356_16400 0.62 +1.3 3,705,836 - AO356_16400 0.62 +0.7 3,705,880 + AO356_16400 0.66 -0.8 3,705,880 + AO356_16400 0.66 -0.7 3,705,880 + AO356_16400 0.66 -0.0 3,705,880 + AO356_16400 0.66 +0.5 3,705,880 + AO356_16400 0.66 -0.2 3,705,881 - AO356_16400 0.66 +0.5 3,705,881 - AO356_16400 0.66 +0.3 3,705,881 - AO356_16400 0.66 -0.2 3,705,881 - AO356_16400 0.66 -0.4 3,705,881 - AO356_16400 0.66 +1.4 3,706,093 + AO356_16400 0.83 -0.0 3,706,094 - AO356_16400 0.83 -0.5 3,706,094 - AO356_16400 0.83 -0.4 3,706,219 + -0.3 3,706,219 + -0.8 3,706,219 + +1.2 3,706,219 + -0.6 3,706,219 + -1.5 3,706,219 + -0.7 3,706,219 + -1.0 3,706,219 + +0.9 3,706,219 + -0.4 3,706,219 + +0.2 3,706,219 + +0.8 3,706,220 - -0.0 3,706,220 - +0.4 3,706,220 - -0.2 3,706,220 - +0.7 3,706,220 - +0.3 3,706,220 - +0.1 3,706,220 - +0.2 3,706,225 + -0.2 3,706,225 + +2.2 3,706,225 + -0.2 3,706,225 + +0.7 3,706,225 + -0.0 3,706,225 + +0.6 3,706,225 + -1.1 3,706,226 - -0.6 3,706,226 - -0.9 3,706,226 - -1.7 3,706,226 - +1.5 3,706,226 - +0.8 3,706,226 - -0.9 3,706,285 - +0.3 3,706,368 + -0.9 3,706,374 + -0.2 3,706,375 - +0.5 3,706,507 + AO356_16405 0.14 -0.3 3,706,507 + AO356_16405 0.14 +0.4 3,706,507 + AO356_16405 0.14 -2.5 3,706,507 + AO356_16405 0.14 +0.5 3,706,508 - AO356_16405 0.14 -0.6 3,706,508 - AO356_16405 0.14 +0.9 3,706,508 - AO356_16405 0.14 +0.0 3,706,508 - AO356_16405 0.14 -0.2 3,706,508 - AO356_16405 0.14 -0.0 3,706,508 - AO356_16405 0.14 +0.8 3,706,576 + AO356_16405 0.20 -0.7 3,706,576 + AO356_16405 0.20 -0.5 3,706,576 + AO356_16405 0.20 -0.0 3,706,576 + AO356_16405 0.20 +0.5 3,706,576 + AO356_16405 0.20 +0.5 3,706,576 + AO356_16405 0.20 -0.6 3,706,576 + AO356_16405 0.20 -0.6 3,706,577 - AO356_16405 0.20 +0.2 3,706,670 - AO356_16405 0.29 +0.4 3,706,678 + AO356_16405 0.30 +0.1 3,706,679 - AO356_16405 0.30 +0.4 3,706,791 + AO356_16405 0.40 +0.9 3,706,791 + AO356_16405 0.40 -1.2 3,706,792 - AO356_16405 0.40 +1.9 3,706,792 - AO356_16405 0.40 +0.1 3,706,792 - AO356_16405 0.40 +0.8 3,706,792 - AO356_16405 0.40 +1.2 3,706,792 - AO356_16405 0.40 -0.4 3,706,806 + AO356_16405 0.42 +1.2 3,706,807 - AO356_16405 0.42 +0.5 3,706,884 + AO356_16405 0.49 -0.7 3,706,885 - AO356_16405 0.49 -0.0 3,706,885 - AO356_16405 0.49 +0.4 3,706,885 - AO356_16405 0.49 +0.0 3,706,987 + AO356_16405 0.59 +2.2 3,707,164 - AO356_16405 0.75 +0.8 3,707,326 - -0.9 3,707,413 + +0.8 3,707,413 + -0.7 3,707,414 - +0.0 3,707,495 - +0.1 3,707,505 + +0.4 3,707,516 - +1.4 3,707,524 + -0.2 3,707,556 + -0.1 3,707,601 - -0.5 3,707,622 + +0.4 3,707,657 + +0.2 3,707,658 - +0.0 3,707,666 + +0.0 3,707,667 - +0.3 3,707,681 + -1.3 3,707,682 - +0.6 3,707,682 - -0.1 3,707,682 - +0.3 3,707,706 + +0.7 3,707,706 + +0.5 3,707,707 - +0.4 3,707,712 + +0.8 3,707,713 - +1.0 3,707,713 - -0.5 3,707,713 - -0.5 3,707,731 + +0.2 3,707,732 - +0.3 3,707,773 - -0.1 3,707,773 - -1.4 3,707,774 + -0.2 3,707,870 - +0.4 3,707,870 - +1.0 3,707,897 + +1.2 3,707,901 + -2.3 3,707,902 - +0.3 3,707,921 + +0.8 3,707,922 - -0.4 3,708,004 - +1.6 3,708,036 + +0.6 3,708,036 + +0.5 3,708,036 + +0.1 3,708,036 + -0.1 3,708,036 + +0.5 3,708,036 + +1.0 3,708,037 - -0.2 3,708,037 - +0.0 3,708,037 - -0.7 3,708,037 - +0.8 3,708,037 - -0.7 3,708,235 + AO356_16410 0.14 -0.2 3,708,236 - AO356_16410 0.14 -0.7 3,708,236 - AO356_16410 0.14 -1.2 3,708,236 - AO356_16410 0.14 -0.1 3,708,279 + AO356_16410 0.16 +0.8 3,708,279 + AO356_16410 0.16 +0.4 3,708,279 + AO356_16410 0.16 +1.1 3,708,279 + AO356_16410 0.16 +0.4 3,708,279 + AO356_16410 0.16 -0.3 3,708,279 + AO356_16410 0.16 +0.1 3,708,280 - AO356_16410 0.16 -0.3 3,708,280 - AO356_16410 0.16 +0.2 3,708,280 - AO356_16410 0.16 +1.1 3,708,280 - AO356_16410 0.16 +0.0 3,708,280 - AO356_16410 0.16 -0.0 3,708,280 - AO356_16410 0.16 -0.9 3,708,280 - AO356_16410 0.16 -0.6 3,708,280 - AO356_16410 0.16 +1.1 3,708,280 - AO356_16410 0.16 -2.1 3,708,280 - AO356_16410 0.16 -0.7 3,708,347 + AO356_16410 0.19 +1.1 3,708,347 + AO356_16410 0.19 +0.4 3,708,347 + AO356_16410 0.19 +0.3 3,708,348 - AO356_16410 0.19 +0.8
Or see this region's nucleotide sequence