Experiment: Chlorite 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_13315 and AO356_13320 are separated by 31 nucleotides AO356_13320 and AO356_13325 overlap by 1 nucleotides
AO356_13315: AO356_13315 - alpha/beta hydrolase, at 3,026,659 to 3,027,657
_13315
AO356_13320: AO356_13320 - 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD, at 3,027,689 to 3,028,300
_13320
AO356_13325: AO356_13325 - peptidase M16, at 3,028,300 to 3,029,790
_13325
Position (kb)
3027
3028
3029 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3026.708 kb on + strand at 3026.708 kb on + strand at 3026.708 kb on + strand at 3026.708 kb on + strand at 3026.709 kb on - strand at 3026.709 kb on - strand at 3026.709 kb on - strand at 3026.709 kb on - strand at 3026.709 kb on - strand at 3026.709 kb on - strand at 3026.709 kb on - strand at 3026.709 kb on - strand at 3026.711 kb on + strand at 3026.712 kb on - strand at 3026.712 kb on - strand at 3026.712 kb on - strand at 3026.712 kb on - strand at 3026.791 kb on + strand, within AO356_13315 at 3026.792 kb on - strand, within AO356_13315 at 3026.792 kb on - strand, within AO356_13315 at 3026.885 kb on + strand, within AO356_13315 at 3026.886 kb on - strand, within AO356_13315 at 3026.886 kb on - strand, within AO356_13315 at 3026.906 kb on + strand, within AO356_13315 at 3026.906 kb on + strand, within AO356_13315 at 3026.907 kb on - strand, within AO356_13315 at 3026.909 kb on + strand, within AO356_13315 at 3026.909 kb on + strand, within AO356_13315 at 3026.909 kb on + strand, within AO356_13315 at 3026.910 kb on - strand, within AO356_13315 at 3026.910 kb on - strand, within AO356_13315 at 3027.065 kb on + strand, within AO356_13315 at 3027.065 kb on + strand, within AO356_13315 at 3027.065 kb on + strand, within AO356_13315 at 3027.065 kb on + strand, within AO356_13315 at 3027.065 kb on + strand, within AO356_13315 at 3027.065 kb on + strand, within AO356_13315 at 3027.065 kb on + strand, within AO356_13315 at 3027.065 kb on + strand, within AO356_13315 at 3027.066 kb on - strand, within AO356_13315 at 3027.066 kb on - strand, within AO356_13315 at 3027.066 kb on - strand, within AO356_13315 at 3027.066 kb on - strand, within AO356_13315 at 3027.066 kb on - strand, within AO356_13315 at 3027.066 kb on - strand, within AO356_13315 at 3027.066 kb on - strand, within AO356_13315 at 3027.066 kb on - strand, within AO356_13315 at 3027.066 kb on - strand, within AO356_13315 at 3027.066 kb on - strand, within AO356_13315 at 3027.098 kb on + strand, within AO356_13315 at 3027.098 kb on + strand, within AO356_13315 at 3027.099 kb on - strand, within AO356_13315 at 3027.326 kb on + strand, within AO356_13315 at 3027.326 kb on + strand, within AO356_13315 at 3027.326 kb on + strand, within AO356_13315 at 3027.327 kb on - strand, within AO356_13315 at 3027.327 kb on - strand, within AO356_13315 at 3027.327 kb on - strand, within AO356_13315 at 3027.428 kb on + strand, within AO356_13315 at 3027.428 kb on + strand, within AO356_13315 at 3027.428 kb on + strand, within AO356_13315 at 3027.429 kb on - strand, within AO356_13315 at 3027.429 kb on - strand, within AO356_13315 at 3027.429 kb on - strand, within AO356_13315 at 3027.429 kb on - strand, within AO356_13315 at 3027.429 kb on - strand, within AO356_13315 at 3027.661 kb on + strand at 3027.662 kb on - strand at 3027.662 kb on - strand at 3027.662 kb on - strand at 3027.726 kb on + strand at 3027.726 kb on + strand at 3027.726 kb on + strand at 3027.726 kb on + strand at 3027.726 kb on + strand at 3027.727 kb on - strand at 3027.727 kb on - strand at 3027.727 kb on - strand at 3027.727 kb on - strand at 3027.727 kb on - strand at 3027.729 kb on + strand at 3027.729 kb on + strand at 3027.729 kb on + strand at 3027.729 kb on + strand at 3027.729 kb on + strand at 3027.730 kb on - strand at 3027.730 kb on - strand at 3027.730 kb on - strand at 3027.730 kb on - strand at 3027.730 kb on - strand at 3027.730 kb on - strand at 3027.730 kb on - strand at 3027.730 kb on - strand at 3027.730 kb on - strand at 3027.813 kb on + strand, within AO356_13320 at 3027.813 kb on + strand, within AO356_13320 at 3027.814 kb on - strand, within AO356_13320 at 3027.942 kb on + strand, within AO356_13320 at 3027.943 kb on - strand, within AO356_13320 at 3028.132 kb on - strand, within AO356_13320 at 3028.132 kb on - strand, within AO356_13320 at 3028.132 kb on - strand, within AO356_13320 at 3028.132 kb on - strand, within AO356_13320 at 3028.132 kb on - strand, within AO356_13320 at 3028.301 kb on + strand at 3028.302 kb on - strand at 3028.302 kb on - strand at 3028.302 kb on - strand at 3028.302 kb on - strand at 3028.344 kb on + strand at 3028.344 kb on + strand at 3028.345 kb on - strand at 3028.484 kb on + strand, within AO356_13325 at 3028.484 kb on + strand, within AO356_13325 at 3028.485 kb on - strand, within AO356_13325 at 3028.485 kb on - strand, within AO356_13325 at 3028.502 kb on + strand, within AO356_13325 at 3028.502 kb on + strand, within AO356_13325 at 3028.502 kb on + strand, within AO356_13325 at 3028.502 kb on + strand, within AO356_13325 at 3028.503 kb on - strand, within AO356_13325 at 3028.503 kb on - strand, within AO356_13325 at 3028.503 kb on - strand, within AO356_13325 at 3028.503 kb on - strand, within AO356_13325 at 3028.503 kb on - strand, within AO356_13325 at 3028.503 kb on - strand, within AO356_13325 at 3028.503 kb on - strand, within AO356_13325 at 3028.625 kb on + strand, within AO356_13325 at 3028.626 kb on - strand, within AO356_13325 at 3028.726 kb on - strand, within AO356_13325 at 3028.736 kb on + strand, within AO356_13325 at 3028.736 kb on + strand, within AO356_13325 at 3028.737 kb on - strand, within AO356_13325 at 3028.745 kb on + strand, within AO356_13325 at 3028.746 kb on - strand, within AO356_13325 at 3028.746 kb on - strand, within AO356_13325 at 3028.838 kb on + strand, within AO356_13325 at 3028.838 kb on + strand, within AO356_13325 at 3028.839 kb on - strand, within AO356_13325 at 3029.060 kb on + strand, within AO356_13325 at 3029.060 kb on + strand, within AO356_13325 at 3029.060 kb on + strand, within AO356_13325 at 3029.061 kb on - strand, within AO356_13325 at 3029.141 kb on + strand, within AO356_13325 at 3029.141 kb on + strand, within AO356_13325 at 3029.141 kb on + strand, within AO356_13325 at 3029.141 kb on + strand, within AO356_13325 at 3029.142 kb on - strand, within AO356_13325 at 3029.142 kb on - strand, within AO356_13325 at 3029.142 kb on - strand, within AO356_13325 at 3029.142 kb on - strand, within AO356_13325 at 3029.142 kb on - strand, within AO356_13325 at 3029.210 kb on + strand, within AO356_13325
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.08 mM remove 3,026,708 + -0.5 3,026,708 + -0.5 3,026,708 + +1.6 3,026,708 + +0.3 3,026,709 - +0.0 3,026,709 - +0.8 3,026,709 - -0.5 3,026,709 - +0.2 3,026,709 - -0.5 3,026,709 - +0.7 3,026,709 - +0.6 3,026,709 - +0.6 3,026,711 + -0.1 3,026,712 - -2.0 3,026,712 - -0.0 3,026,712 - -1.1 3,026,712 - -0.1 3,026,791 + AO356_13315 0.13 -0.3 3,026,792 - AO356_13315 0.13 -0.3 3,026,792 - AO356_13315 0.13 +0.7 3,026,885 + AO356_13315 0.23 -0.3 3,026,886 - AO356_13315 0.23 -0.3 3,026,886 - AO356_13315 0.23 +1.3 3,026,906 + AO356_13315 0.25 +0.4 3,026,906 + AO356_13315 0.25 +0.1 3,026,907 - AO356_13315 0.25 +0.4 3,026,909 + AO356_13315 0.25 -0.1 3,026,909 + AO356_13315 0.25 -0.7 3,026,909 + AO356_13315 0.25 -0.7 3,026,910 - AO356_13315 0.25 -2.5 3,026,910 - AO356_13315 0.25 -0.3 3,027,065 + AO356_13315 0.41 +0.2 3,027,065 + AO356_13315 0.41 +0.2 3,027,065 + AO356_13315 0.41 +2.5 3,027,065 + AO356_13315 0.41 +0.2 3,027,065 + AO356_13315 0.41 +0.2 3,027,065 + AO356_13315 0.41 +0.0 3,027,065 + AO356_13315 0.41 +0.4 3,027,065 + AO356_13315 0.41 +0.2 3,027,066 - AO356_13315 0.41 -0.3 3,027,066 - AO356_13315 0.41 -1.0 3,027,066 - AO356_13315 0.41 -0.2 3,027,066 - AO356_13315 0.41 -0.2 3,027,066 - AO356_13315 0.41 +0.7 3,027,066 - AO356_13315 0.41 +0.5 3,027,066 - AO356_13315 0.41 -0.4 3,027,066 - AO356_13315 0.41 +0.8 3,027,066 - AO356_13315 0.41 +0.5 3,027,066 - AO356_13315 0.41 -0.3 3,027,098 + AO356_13315 0.44 -1.2 3,027,098 + AO356_13315 0.44 -0.6 3,027,099 - AO356_13315 0.44 +0.1 3,027,326 + AO356_13315 0.67 +0.1 3,027,326 + AO356_13315 0.67 +0.9 3,027,326 + AO356_13315 0.67 +0.5 3,027,327 - AO356_13315 0.67 -1.5 3,027,327 - AO356_13315 0.67 +0.1 3,027,327 - AO356_13315 0.67 +1.0 3,027,428 + AO356_13315 0.77 -0.8 3,027,428 + AO356_13315 0.77 -1.1 3,027,428 + AO356_13315 0.77 +0.6 3,027,429 - AO356_13315 0.77 +1.7 3,027,429 - AO356_13315 0.77 -1.9 3,027,429 - AO356_13315 0.77 +0.8 3,027,429 - AO356_13315 0.77 +0.7 3,027,429 - AO356_13315 0.77 -0.4 3,027,661 + +1.7 3,027,662 - -1.0 3,027,662 - +1.2 3,027,662 - -0.2 3,027,726 + +0.3 3,027,726 + +0.7 3,027,726 + -0.1 3,027,726 + +1.0 3,027,726 + -0.6 3,027,727 - -0.0 3,027,727 - +1.3 3,027,727 - -0.4 3,027,727 - -1.2 3,027,727 - +0.3 3,027,729 + +0.1 3,027,729 + -0.8 3,027,729 + -0.4 3,027,729 + -0.6 3,027,729 + -0.4 3,027,730 - -2.2 3,027,730 - -0.8 3,027,730 - -1.7 3,027,730 - -2.0 3,027,730 - -1.1 3,027,730 - -0.1 3,027,730 - -0.8 3,027,730 - +0.3 3,027,730 - -0.4 3,027,813 + AO356_13320 0.20 -0.6 3,027,813 + AO356_13320 0.20 +0.3 3,027,814 - AO356_13320 0.20 -2.3 3,027,942 + AO356_13320 0.41 +0.1 3,027,943 - AO356_13320 0.42 -1.8 3,028,132 - AO356_13320 0.72 -0.9 3,028,132 - AO356_13320 0.72 -1.5 3,028,132 - AO356_13320 0.72 +0.5 3,028,132 - AO356_13320 0.72 +0.6 3,028,132 - AO356_13320 0.72 -0.4 3,028,301 + -0.5 3,028,302 - +1.4 3,028,302 - -0.1 3,028,302 - -0.3 3,028,302 - -0.7 3,028,344 + -0.9 3,028,344 + -0.1 3,028,345 - -0.5 3,028,484 + AO356_13325 0.12 -1.7 3,028,484 + AO356_13325 0.12 +0.2 3,028,485 - AO356_13325 0.12 -0.9 3,028,485 - AO356_13325 0.12 +0.0 3,028,502 + AO356_13325 0.14 +0.4 3,028,502 + AO356_13325 0.14 +0.3 3,028,502 + AO356_13325 0.14 +0.7 3,028,502 + AO356_13325 0.14 +0.9 3,028,503 - AO356_13325 0.14 -0.8 3,028,503 - AO356_13325 0.14 +1.0 3,028,503 - AO356_13325 0.14 -0.9 3,028,503 - AO356_13325 0.14 -1.5 3,028,503 - AO356_13325 0.14 +0.2 3,028,503 - AO356_13325 0.14 +0.1 3,028,503 - AO356_13325 0.14 +0.2 3,028,625 + AO356_13325 0.22 +0.3 3,028,626 - AO356_13325 0.22 -2.5 3,028,726 - AO356_13325 0.29 -0.1 3,028,736 + AO356_13325 0.29 -0.2 3,028,736 + AO356_13325 0.29 -0.0 3,028,737 - AO356_13325 0.29 +0.1 3,028,745 + AO356_13325 0.30 -1.6 3,028,746 - AO356_13325 0.30 -0.7 3,028,746 - AO356_13325 0.30 +1.0 3,028,838 + AO356_13325 0.36 -1.2 3,028,838 + AO356_13325 0.36 -0.5 3,028,839 - AO356_13325 0.36 -0.5 3,029,060 + AO356_13325 0.51 -0.5 3,029,060 + AO356_13325 0.51 -2.1 3,029,060 + AO356_13325 0.51 -0.5 3,029,061 - AO356_13325 0.51 +0.4 3,029,141 + AO356_13325 0.56 -0.9 3,029,141 + AO356_13325 0.56 -1.9 3,029,141 + AO356_13325 0.56 -0.6 3,029,141 + AO356_13325 0.56 +0.5 3,029,142 - AO356_13325 0.56 -0.7 3,029,142 - AO356_13325 0.56 +0.1 3,029,142 - AO356_13325 0.56 +0.7 3,029,142 - AO356_13325 0.56 +0.5 3,029,142 - AO356_13325 0.56 +0.6 3,029,210 + AO356_13325 0.61 -0.5
Or see this region's nucleotide sequence