Experiment: Chlorite 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_11615 and AO356_11620 are separated by 233 nucleotides AO356_11620 and AO356_11625 are separated by 128 nucleotides
AO356_11615: AO356_11615 - histidine kinase, at 2,628,913 to 2,630,430
_11615
AO356_11620: AO356_11620 - transcriptional regulator, at 2,630,664 to 2,631,398
_11620
AO356_11625: AO356_11625 - GABA permease, at 2,631,527 to 2,632,921
_11625
Position (kb)
2630
2631
2632 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2629.677 kb on + strand, within AO356_11615 at 2629.677 kb on + strand, within AO356_11615 at 2629.677 kb on + strand, within AO356_11615 at 2629.677 kb on + strand, within AO356_11615 at 2629.677 kb on + strand, within AO356_11615 at 2629.677 kb on + strand, within AO356_11615 at 2629.678 kb on - strand, within AO356_11615 at 2629.678 kb on - strand, within AO356_11615 at 2629.678 kb on - strand, within AO356_11615 at 2629.678 kb on - strand, within AO356_11615 at 2629.883 kb on + strand, within AO356_11615 at 2629.883 kb on + strand, within AO356_11615 at 2629.883 kb on + strand, within AO356_11615 at 2629.884 kb on - strand, within AO356_11615 at 2629.884 kb on - strand, within AO356_11615 at 2629.884 kb on - strand, within AO356_11615 at 2629.884 kb on - strand, within AO356_11615 at 2629.884 kb on - strand, within AO356_11615 at 2629.982 kb on + strand, within AO356_11615 at 2629.982 kb on + strand, within AO356_11615 at 2629.983 kb on - strand, within AO356_11615 at 2629.983 kb on - strand, within AO356_11615 at 2629.983 kb on - strand, within AO356_11615 at 2629.983 kb on - strand, within AO356_11615 at 2629.983 kb on - strand, within AO356_11615 at 2629.983 kb on - strand, within AO356_11615 at 2630.052 kb on - strand, within AO356_11615 at 2630.052 kb on - strand, within AO356_11615 at 2630.052 kb on - strand, within AO356_11615 at 2630.052 kb on - strand, within AO356_11615 at 2630.184 kb on + strand, within AO356_11615 at 2630.184 kb on + strand, within AO356_11615 at 2630.184 kb on + strand, within AO356_11615 at 2630.184 kb on + strand, within AO356_11615 at 2630.184 kb on + strand, within AO356_11615 at 2630.185 kb on - strand, within AO356_11615 at 2630.185 kb on - strand, within AO356_11615 at 2630.185 kb on - strand, within AO356_11615 at 2630.185 kb on - strand, within AO356_11615 at 2630.185 kb on - strand, within AO356_11615 at 2630.185 kb on - strand, within AO356_11615 at 2630.185 kb on - strand, within AO356_11615 at 2630.185 kb on - strand, within AO356_11615 at 2630.191 kb on + strand, within AO356_11615 at 2630.191 kb on + strand, within AO356_11615 at 2630.191 kb on + strand, within AO356_11615 at 2630.191 kb on + strand, within AO356_11615 at 2630.191 kb on + strand, within AO356_11615 at 2630.192 kb on - strand, within AO356_11615 at 2630.192 kb on - strand, within AO356_11615 at 2630.192 kb on - strand, within AO356_11615 at 2630.192 kb on - strand, within AO356_11615 at 2630.239 kb on + strand, within AO356_11615 at 2630.239 kb on + strand, within AO356_11615 at 2630.239 kb on + strand, within AO356_11615 at 2630.240 kb on - strand, within AO356_11615 at 2630.240 kb on - strand, within AO356_11615 at 2630.240 kb on - strand, within AO356_11615 at 2630.344 kb on + strand at 2630.345 kb on - strand at 2630.345 kb on - strand at 2630.424 kb on + strand at 2630.430 kb on + strand at 2630.430 kb on + strand at 2630.430 kb on + strand at 2630.430 kb on + strand at 2630.430 kb on + strand at 2630.430 kb on + strand at 2630.430 kb on + strand at 2630.430 kb on + strand at 2630.430 kb on + strand at 2630.430 kb on + strand at 2630.431 kb on - strand at 2630.431 kb on - strand at 2630.431 kb on - strand at 2630.431 kb on - strand at 2630.431 kb on - strand at 2630.463 kb on - strand at 2630.481 kb on - strand at 2630.481 kb on - strand at 2630.508 kb on + strand at 2630.508 kb on + strand at 2630.509 kb on - strand at 2630.509 kb on - strand at 2630.510 kb on + strand at 2630.511 kb on - strand at 2630.636 kb on + strand at 2630.636 kb on + strand at 2630.677 kb on + strand at 2630.710 kb on + strand at 2630.710 kb on + strand at 2630.710 kb on + strand at 2630.711 kb on - strand at 2630.711 kb on - strand at 2630.711 kb on - strand at 2630.711 kb on - strand at 2630.976 kb on + strand, within AO356_11620 at 2630.976 kb on + strand, within AO356_11620 at 2630.976 kb on + strand, within AO356_11620 at 2630.976 kb on + strand, within AO356_11620 at 2630.976 kb on + strand, within AO356_11620 at 2630.976 kb on + strand, within AO356_11620 at 2630.976 kb on + strand, within AO356_11620 at 2630.976 kb on + strand, within AO356_11620 at 2630.976 kb on + strand, within AO356_11620 at 2630.976 kb on + strand, within AO356_11620 at 2630.977 kb on - strand, within AO356_11620 at 2630.977 kb on - strand, within AO356_11620 at 2630.977 kb on - strand, within AO356_11620 at 2630.977 kb on - strand, within AO356_11620 at 2630.977 kb on - strand, within AO356_11620 at 2631.210 kb on + strand, within AO356_11620 at 2631.211 kb on - strand, within AO356_11620 at 2631.211 kb on - strand, within AO356_11620 at 2631.211 kb on - strand, within AO356_11620 at 2631.211 kb on - strand, within AO356_11620 at 2631.211 kb on - strand, within AO356_11620 at 2631.211 kb on - strand, within AO356_11620 at 2631.216 kb on + strand, within AO356_11620 at 2631.216 kb on + strand, within AO356_11620 at 2631.216 kb on + strand, within AO356_11620 at 2631.216 kb on + strand, within AO356_11620 at 2631.217 kb on - strand, within AO356_11620 at 2631.217 kb on - strand, within AO356_11620 at 2631.217 kb on - strand, within AO356_11620 at 2631.217 kb on - strand, within AO356_11620 at 2631.272 kb on + strand, within AO356_11620 at 2631.272 kb on + strand, within AO356_11620 at 2631.272 kb on + strand, within AO356_11620 at 2631.272 kb on + strand, within AO356_11620 at 2631.272 kb on + strand, within AO356_11620 at 2631.272 kb on + strand, within AO356_11620 at 2631.272 kb on + strand, within AO356_11620 at 2631.272 kb on + strand, within AO356_11620 at 2631.272 kb on + strand, within AO356_11620 at 2631.272 kb on + strand, within AO356_11620 at 2631.272 kb on + strand, within AO356_11620 at 2631.272 kb on + strand, within AO356_11620 at 2631.272 kb on + strand, within AO356_11620 at 2631.272 kb on + strand, within AO356_11620 at 2631.272 kb on + strand, within AO356_11620 at 2631.273 kb on - strand, within AO356_11620 at 2631.273 kb on - strand, within AO356_11620 at 2631.273 kb on - strand, within AO356_11620 at 2631.273 kb on - strand, within AO356_11620 at 2631.273 kb on - strand, within AO356_11620 at 2631.273 kb on - strand, within AO356_11620 at 2631.273 kb on - strand, within AO356_11620 at 2631.273 kb on - strand, within AO356_11620 at 2631.273 kb on - strand, within AO356_11620 at 2631.273 kb on - strand, within AO356_11620 at 2631.273 kb on - strand, within AO356_11620 at 2631.273 kb on - strand, within AO356_11620 at 2631.273 kb on - strand, within AO356_11620 at 2631.276 kb on + strand, within AO356_11620 at 2631.276 kb on + strand, within AO356_11620 at 2631.276 kb on + strand, within AO356_11620 at 2631.276 kb on + strand, within AO356_11620 at 2631.276 kb on + strand, within AO356_11620 at 2631.277 kb on - strand, within AO356_11620 at 2631.325 kb on + strand at 2631.326 kb on - strand at 2631.326 kb on - strand at 2631.326 kb on - strand at 2631.326 kb on - strand at 2631.326 kb on - strand at 2631.336 kb on + strand at 2631.336 kb on + strand at 2631.336 kb on + strand at 2631.337 kb on - strand at 2631.337 kb on - strand at 2631.337 kb on - strand at 2631.337 kb on - strand at 2631.396 kb on + strand at 2631.396 kb on + strand at 2631.396 kb on + strand at 2631.397 kb on - strand at 2631.397 kb on - strand at 2631.414 kb on + strand at 2631.414 kb on + strand at 2631.414 kb on + strand at 2631.414 kb on + strand at 2631.414 kb on + strand at 2631.414 kb on + strand at 2631.415 kb on - strand at 2631.415 kb on - strand at 2631.415 kb on - strand at 2631.484 kb on + strand at 2631.485 kb on - strand at 2631.561 kb on - strand at 2631.561 kb on - strand at 2631.561 kb on - strand at 2631.578 kb on + strand at 2631.578 kb on + strand at 2631.579 kb on - strand at 2631.579 kb on - strand at 2631.579 kb on - strand at 2631.699 kb on + strand, within AO356_11625 at 2631.700 kb on - strand, within AO356_11625 at 2631.700 kb on - strand, within AO356_11625 at 2631.700 kb on - strand, within AO356_11625 at 2631.769 kb on + strand, within AO356_11625 at 2631.798 kb on + strand, within AO356_11625 at 2631.798 kb on + strand, within AO356_11625 at 2631.798 kb on + strand, within AO356_11625 at 2631.799 kb on - strand, within AO356_11625 at 2631.799 kb on - strand, within AO356_11625 at 2631.799 kb on - strand, within AO356_11625 at 2631.799 kb on - strand, within AO356_11625 at 2631.799 kb on - strand, within AO356_11625 at 2631.864 kb on + strand, within AO356_11625 at 2631.864 kb on + strand, within AO356_11625 at 2631.864 kb on + strand, within AO356_11625 at 2631.864 kb on + strand, within AO356_11625 at 2631.864 kb on + strand, within AO356_11625 at 2631.864 kb on + strand, within AO356_11625 at 2631.864 kb on + strand, within AO356_11625 at 2631.864 kb on + strand, within AO356_11625 at 2631.865 kb on - strand, within AO356_11625 at 2631.865 kb on - strand, within AO356_11625 at 2631.865 kb on - strand, within AO356_11625 at 2631.865 kb on - strand, within AO356_11625 at 2631.865 kb on - strand, within AO356_11625 at 2631.865 kb on - strand, within AO356_11625 at 2631.865 kb on - strand, within AO356_11625 at 2631.865 kb on - strand, within AO356_11625 at 2631.865 kb on - strand, within AO356_11625 at 2632.005 kb on + strand, within AO356_11625 at 2632.005 kb on + strand, within AO356_11625 at 2632.005 kb on + strand, within AO356_11625 at 2632.005 kb on + strand, within AO356_11625 at 2632.006 kb on - strand, within AO356_11625 at 2632.006 kb on - strand, within AO356_11625 at 2632.104 kb on + strand, within AO356_11625 at 2632.104 kb on + strand, within AO356_11625 at 2632.105 kb on - strand, within AO356_11625 at 2632.105 kb on - strand, within AO356_11625 at 2632.105 kb on - strand, within AO356_11625 at 2632.176 kb on + strand, within AO356_11625 at 2632.176 kb on + strand, within AO356_11625 at 2632.177 kb on - strand, within AO356_11625 at 2632.177 kb on - strand, within AO356_11625 at 2632.177 kb on - strand, within AO356_11625
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.08 mM remove 2,629,677 + AO356_11615 0.50 -0.0 2,629,677 + AO356_11615 0.50 +1.3 2,629,677 + AO356_11615 0.50 +0.5 2,629,677 + AO356_11615 0.50 -0.1 2,629,677 + AO356_11615 0.50 +0.2 2,629,677 + AO356_11615 0.50 +0.2 2,629,678 - AO356_11615 0.50 +0.7 2,629,678 - AO356_11615 0.50 -0.1 2,629,678 - AO356_11615 0.50 +0.0 2,629,678 - AO356_11615 0.50 +1.1 2,629,883 + AO356_11615 0.64 -0.5 2,629,883 + AO356_11615 0.64 +0.3 2,629,883 + AO356_11615 0.64 +0.4 2,629,884 - AO356_11615 0.64 -1.5 2,629,884 - AO356_11615 0.64 +0.4 2,629,884 - AO356_11615 0.64 +0.4 2,629,884 - AO356_11615 0.64 -0.7 2,629,884 - AO356_11615 0.64 -0.1 2,629,982 + AO356_11615 0.70 -1.4 2,629,982 + AO356_11615 0.70 +0.3 2,629,983 - AO356_11615 0.70 +0.0 2,629,983 - AO356_11615 0.70 +0.4 2,629,983 - AO356_11615 0.70 +0.2 2,629,983 - AO356_11615 0.70 +1.5 2,629,983 - AO356_11615 0.70 -1.5 2,629,983 - AO356_11615 0.70 -0.1 2,630,052 - AO356_11615 0.75 -0.5 2,630,052 - AO356_11615 0.75 -1.3 2,630,052 - AO356_11615 0.75 -0.1 2,630,052 - AO356_11615 0.75 +0.4 2,630,184 + AO356_11615 0.84 -0.8 2,630,184 + AO356_11615 0.84 +0.5 2,630,184 + AO356_11615 0.84 +0.5 2,630,184 + AO356_11615 0.84 +1.3 2,630,184 + AO356_11615 0.84 +0.1 2,630,185 - AO356_11615 0.84 +0.1 2,630,185 - AO356_11615 0.84 +0.5 2,630,185 - AO356_11615 0.84 +1.3 2,630,185 - AO356_11615 0.84 -0.1 2,630,185 - AO356_11615 0.84 +0.7 2,630,185 - AO356_11615 0.84 +1.3 2,630,185 - AO356_11615 0.84 +0.3 2,630,185 - AO356_11615 0.84 +0.4 2,630,191 + AO356_11615 0.84 +0.1 2,630,191 + AO356_11615 0.84 +0.1 2,630,191 + AO356_11615 0.84 +1.3 2,630,191 + AO356_11615 0.84 -0.5 2,630,191 + AO356_11615 0.84 +0.7 2,630,192 - AO356_11615 0.84 +0.5 2,630,192 - AO356_11615 0.84 -0.1 2,630,192 - AO356_11615 0.84 +0.3 2,630,192 - AO356_11615 0.84 +0.8 2,630,239 + AO356_11615 0.87 -0.7 2,630,239 + AO356_11615 0.87 +2.4 2,630,239 + AO356_11615 0.87 +1.0 2,630,240 - AO356_11615 0.87 -0.2 2,630,240 - AO356_11615 0.87 -0.2 2,630,240 - AO356_11615 0.87 +1.3 2,630,344 + +0.5 2,630,345 - +1.2 2,630,345 - -0.1 2,630,424 + -1.2 2,630,430 + -0.4 2,630,430 + +0.1 2,630,430 + +0.8 2,630,430 + -1.5 2,630,430 + +0.7 2,630,430 + +0.2 2,630,430 + -0.6 2,630,430 + -1.1 2,630,430 + +0.3 2,630,430 + -0.3 2,630,431 - +0.4 2,630,431 - +1.1 2,630,431 - +0.3 2,630,431 - +0.2 2,630,431 - -1.1 2,630,463 - +0.6 2,630,481 - +0.1 2,630,481 - -1.7 2,630,508 + -1.0 2,630,508 + +1.5 2,630,509 - -0.3 2,630,509 - +0.5 2,630,510 + -1.0 2,630,511 - +0.8 2,630,636 + +0.6 2,630,636 + +0.7 2,630,677 + +0.5 2,630,710 + +2.4 2,630,710 + +0.0 2,630,710 + -0.5 2,630,711 - +0.6 2,630,711 - -0.1 2,630,711 - -0.2 2,630,711 - -0.9 2,630,976 + AO356_11620 0.42 +0.4 2,630,976 + AO356_11620 0.42 +0.5 2,630,976 + AO356_11620 0.42 +0.6 2,630,976 + AO356_11620 0.42 +0.3 2,630,976 + AO356_11620 0.42 -0.3 2,630,976 + AO356_11620 0.42 +0.7 2,630,976 + AO356_11620 0.42 -0.1 2,630,976 + AO356_11620 0.42 -0.8 2,630,976 + AO356_11620 0.42 -0.7 2,630,976 + AO356_11620 0.42 +0.6 2,630,977 - AO356_11620 0.43 +0.5 2,630,977 - AO356_11620 0.43 +0.8 2,630,977 - AO356_11620 0.43 +0.1 2,630,977 - AO356_11620 0.43 +0.8 2,630,977 - AO356_11620 0.43 +0.1 2,631,210 + AO356_11620 0.74 +0.7 2,631,211 - AO356_11620 0.74 +0.7 2,631,211 - AO356_11620 0.74 +0.2 2,631,211 - AO356_11620 0.74 +0.5 2,631,211 - AO356_11620 0.74 -1.0 2,631,211 - AO356_11620 0.74 +0.5 2,631,211 - AO356_11620 0.74 +1.0 2,631,216 + AO356_11620 0.75 +0.5 2,631,216 + AO356_11620 0.75 +0.8 2,631,216 + AO356_11620 0.75 +0.5 2,631,216 + AO356_11620 0.75 +0.7 2,631,217 - AO356_11620 0.75 -0.5 2,631,217 - AO356_11620 0.75 +0.4 2,631,217 - AO356_11620 0.75 +0.5 2,631,217 - AO356_11620 0.75 +0.4 2,631,272 + AO356_11620 0.83 +0.5 2,631,272 + AO356_11620 0.83 +0.6 2,631,272 + AO356_11620 0.83 -0.1 2,631,272 + AO356_11620 0.83 -0.8 2,631,272 + AO356_11620 0.83 +0.7 2,631,272 + AO356_11620 0.83 +1.1 2,631,272 + AO356_11620 0.83 +0.1 2,631,272 + AO356_11620 0.83 -0.4 2,631,272 + AO356_11620 0.83 +1.9 2,631,272 + AO356_11620 0.83 -0.4 2,631,272 + AO356_11620 0.83 -0.7 2,631,272 + AO356_11620 0.83 +0.2 2,631,272 + AO356_11620 0.83 +0.2 2,631,272 + AO356_11620 0.83 +0.2 2,631,272 + AO356_11620 0.83 -0.2 2,631,273 - AO356_11620 0.83 +0.1 2,631,273 - AO356_11620 0.83 -0.4 2,631,273 - AO356_11620 0.83 +0.9 2,631,273 - AO356_11620 0.83 +1.2 2,631,273 - AO356_11620 0.83 -0.4 2,631,273 - AO356_11620 0.83 +0.1 2,631,273 - AO356_11620 0.83 +1.5 2,631,273 - AO356_11620 0.83 -0.8 2,631,273 - AO356_11620 0.83 +1.1 2,631,273 - AO356_11620 0.83 +0.3 2,631,273 - AO356_11620 0.83 -0.1 2,631,273 - AO356_11620 0.83 +1.1 2,631,273 - AO356_11620 0.83 +0.2 2,631,276 + AO356_11620 0.83 +0.8 2,631,276 + AO356_11620 0.83 +0.2 2,631,276 + AO356_11620 0.83 +0.2 2,631,276 + AO356_11620 0.83 +0.6 2,631,276 + AO356_11620 0.83 -0.5 2,631,277 - AO356_11620 0.83 -0.7 2,631,325 + +0.9 2,631,326 - +1.3 2,631,326 - -0.2 2,631,326 - +1.6 2,631,326 - -1.5 2,631,326 - +0.5 2,631,336 + +0.2 2,631,336 + +0.7 2,631,336 + -0.3 2,631,337 - +0.5 2,631,337 - +0.7 2,631,337 - -0.1 2,631,337 - -1.4 2,631,396 + +0.0 2,631,396 + +0.9 2,631,396 + +0.1 2,631,397 - -0.3 2,631,397 - +0.8 2,631,414 + -1.4 2,631,414 + +0.6 2,631,414 + +0.0 2,631,414 + -0.5 2,631,414 + +0.5 2,631,414 + +0.8 2,631,415 - -0.6 2,631,415 - +0.5 2,631,415 - -1.0 2,631,484 + -0.2 2,631,485 - -0.1 2,631,561 - -0.4 2,631,561 - +0.2 2,631,561 - -0.4 2,631,578 + +0.2 2,631,578 + +2.3 2,631,579 - +0.1 2,631,579 - +0.5 2,631,579 - -1.6 2,631,699 + AO356_11625 0.12 -1.0 2,631,700 - AO356_11625 0.12 -0.2 2,631,700 - AO356_11625 0.12 -0.6 2,631,700 - AO356_11625 0.12 -0.1 2,631,769 + AO356_11625 0.17 -1.7 2,631,798 + AO356_11625 0.19 -0.3 2,631,798 + AO356_11625 0.19 -1.9 2,631,798 + AO356_11625 0.19 -0.1 2,631,799 - AO356_11625 0.19 +1.6 2,631,799 - AO356_11625 0.19 +0.7 2,631,799 - AO356_11625 0.19 -0.3 2,631,799 - AO356_11625 0.19 -0.6 2,631,799 - AO356_11625 0.19 +0.2 2,631,864 + AO356_11625 0.24 -0.7 2,631,864 + AO356_11625 0.24 +0.5 2,631,864 + AO356_11625 0.24 -0.6 2,631,864 + AO356_11625 0.24 +1.0 2,631,864 + AO356_11625 0.24 -0.5 2,631,864 + AO356_11625 0.24 -2.5 2,631,864 + AO356_11625 0.24 -0.6 2,631,864 + AO356_11625 0.24 -0.4 2,631,865 - AO356_11625 0.24 -0.1 2,631,865 - AO356_11625 0.24 +0.1 2,631,865 - AO356_11625 0.24 -0.1 2,631,865 - AO356_11625 0.24 +0.8 2,631,865 - AO356_11625 0.24 +1.2 2,631,865 - AO356_11625 0.24 -0.2 2,631,865 - AO356_11625 0.24 +1.2 2,631,865 - AO356_11625 0.24 +0.3 2,631,865 - AO356_11625 0.24 -0.4 2,632,005 + AO356_11625 0.34 +0.4 2,632,005 + AO356_11625 0.34 +0.2 2,632,005 + AO356_11625 0.34 +0.2 2,632,005 + AO356_11625 0.34 +0.7 2,632,006 - AO356_11625 0.34 -0.8 2,632,006 - AO356_11625 0.34 +1.3 2,632,104 + AO356_11625 0.41 -0.1 2,632,104 + AO356_11625 0.41 -0.3 2,632,105 - AO356_11625 0.41 +0.5 2,632,105 - AO356_11625 0.41 -0.4 2,632,105 - AO356_11625 0.41 +0.3 2,632,176 + AO356_11625 0.47 +1.1 2,632,176 + AO356_11625 0.47 +0.5 2,632,177 - AO356_11625 0.47 -0.6 2,632,177 - AO356_11625 0.47 -0.6 2,632,177 - AO356_11625 0.47 -0.8
Or see this region's nucleotide sequence