Experiment: Chlorite 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_09755 and AO356_09760 are separated by 39 nucleotides AO356_09760 and AO356_09765 are separated by 1 nucleotides AO356_09765 and AO356_09770 are separated by 152 nucleotides AO356_09770 and AO356_09775 are separated by 214 nucleotides
AO356_09755: AO356_09755 - preprotein translocase subunit SecB, at 2,212,755 to 2,213,237
_09755
AO356_09760: AO356_09760 - glutaredoxin, at 2,213,277 to 2,213,531
_09760
AO356_09765: AO356_09765 - sulfurtransferase, at 2,213,533 to 2,213,946
_09765
AO356_09770: AO356_09770 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, at 2,214,099 to 2,215,628
_09770
AO356_09775: AO356_09775 - peptidase M23, at 2,215,843 to 2,217,135
_09775
Position (kb)
2214
2215
2216 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2213.167 kb on + strand, within AO356_09755 at 2213.167 kb on + strand, within AO356_09755 at 2213.167 kb on + strand, within AO356_09755 at 2213.167 kb on + strand, within AO356_09755 at 2213.167 kb on + strand, within AO356_09755 at 2213.167 kb on + strand, within AO356_09755 at 2213.167 kb on + strand, within AO356_09755 at 2213.167 kb on + strand, within AO356_09755 at 2213.168 kb on - strand, within AO356_09755 at 2213.168 kb on - strand, within AO356_09755 at 2213.168 kb on - strand, within AO356_09755 at 2213.168 kb on - strand, within AO356_09755 at 2213.251 kb on + strand at 2213.251 kb on + strand at 2213.252 kb on - strand at 2213.252 kb on - strand at 2213.266 kb on + strand at 2213.492 kb on - strand, within AO356_09760 at 2213.492 kb on - strand, within AO356_09760 at 2213.500 kb on + strand, within AO356_09760 at 2213.500 kb on + strand, within AO356_09760 at 2213.500 kb on + strand, within AO356_09760 at 2213.500 kb on + strand, within AO356_09760 at 2213.501 kb on - strand, within AO356_09760 at 2213.512 kb on + strand at 2213.598 kb on + strand, within AO356_09765 at 2213.759 kb on + strand, within AO356_09765 at 2213.759 kb on + strand, within AO356_09765 at 2213.760 kb on - strand, within AO356_09765 at 2213.895 kb on + strand, within AO356_09765 at 2213.909 kb on + strand at 2213.909 kb on + strand at 2213.909 kb on + strand at 2213.909 kb on + strand at 2213.909 kb on + strand at 2213.909 kb on + strand at 2213.909 kb on + strand at 2213.910 kb on - strand at 2213.910 kb on - strand at 2213.910 kb on - strand at 2213.917 kb on - strand at 2213.968 kb on - strand at 2213.982 kb on + strand at 2213.982 kb on + strand at 2213.983 kb on - strand at 2213.983 kb on - strand at 2213.983 kb on - strand at 2213.984 kb on + strand at 2213.984 kb on + strand at 2213.984 kb on + strand at 2213.984 kb on + strand at 2213.984 kb on + strand at 2213.984 kb on + strand at 2213.984 kb on + strand at 2213.984 kb on + strand at 2213.984 kb on + strand at 2213.984 kb on + strand at 2213.984 kb on + strand at 2213.984 kb on + strand at 2213.984 kb on + strand at 2213.984 kb on + strand at 2213.985 kb on - strand at 2213.985 kb on - strand at 2213.985 kb on - strand at 2213.985 kb on - strand at 2214.038 kb on + strand at 2214.038 kb on + strand at 2214.038 kb on + strand at 2214.039 kb on - strand at 2214.039 kb on - strand at 2214.039 kb on - strand at 2214.039 kb on - strand at 2214.044 kb on + strand at 2214.044 kb on + strand at 2214.045 kb on - strand at 2214.045 kb on - strand at 2214.045 kb on - strand at 2214.104 kb on + strand at 2214.104 kb on + strand at 2215.665 kb on - strand at 2215.758 kb on + strand at 2215.759 kb on - strand at 2215.806 kb on + strand at 2215.806 kb on + strand at 2215.806 kb on + strand at 2215.806 kb on + strand at 2215.806 kb on + strand at 2215.806 kb on + strand at 2215.807 kb on - strand at 2215.807 kb on - strand at 2215.807 kb on - strand at 2215.807 kb on - strand at 2215.807 kb on - strand at 2215.807 kb on - strand at 2215.807 kb on - strand at 2215.809 kb on + strand at 2215.809 kb on + strand at 2215.809 kb on + strand at 2215.809 kb on + strand at 2215.809 kb on + strand at 2215.809 kb on + strand at 2215.810 kb on - strand at 2215.810 kb on - strand at 2215.810 kb on - strand at 2215.810 kb on - strand at 2215.842 kb on + strand at 2215.842 kb on + strand at 2215.843 kb on - strand at 2215.843 kb on - strand at 2215.860 kb on - strand at 2216.203 kb on + strand, within AO356_09775 at 2216.203 kb on + strand, within AO356_09775 at 2216.204 kb on - strand, within AO356_09775 at 2216.251 kb on - strand, within AO356_09775 at 2216.260 kb on + strand, within AO356_09775 at 2216.260 kb on + strand, within AO356_09775 at 2216.260 kb on + strand, within AO356_09775 at 2216.260 kb on + strand, within AO356_09775 at 2216.260 kb on + strand, within AO356_09775 at 2216.260 kb on + strand, within AO356_09775 at 2216.260 kb on + strand, within AO356_09775 at 2216.260 kb on + strand, within AO356_09775 at 2216.260 kb on + strand, within AO356_09775 at 2216.260 kb on + strand, within AO356_09775 at 2216.260 kb on + strand, within AO356_09775 at 2216.260 kb on + strand, within AO356_09775 at 2216.261 kb on - strand, within AO356_09775 at 2216.261 kb on - strand, within AO356_09775 at 2216.261 kb on - strand, within AO356_09775 at 2216.261 kb on - strand, within AO356_09775 at 2216.261 kb on - strand, within AO356_09775 at 2216.261 kb on - strand, within AO356_09775 at 2216.263 kb on + strand, within AO356_09775 at 2216.263 kb on + strand, within AO356_09775 at 2216.263 kb on + strand, within AO356_09775 at 2216.263 kb on + strand, within AO356_09775 at 2216.263 kb on + strand, within AO356_09775 at 2216.264 kb on - strand, within AO356_09775 at 2216.264 kb on - strand, within AO356_09775 at 2216.264 kb on - strand, within AO356_09775 at 2216.264 kb on - strand, within AO356_09775 at 2216.269 kb on + strand, within AO356_09775 at 2216.269 kb on + strand, within AO356_09775 at 2216.269 kb on + strand, within AO356_09775 at 2216.269 kb on + strand, within AO356_09775
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.08 mM remove 2,213,167 + AO356_09755 0.85 +0.2 2,213,167 + AO356_09755 0.85 -1.2 2,213,167 + AO356_09755 0.85 -0.1 2,213,167 + AO356_09755 0.85 +1.1 2,213,167 + AO356_09755 0.85 -0.9 2,213,167 + AO356_09755 0.85 -0.4 2,213,167 + AO356_09755 0.85 +0.0 2,213,167 + AO356_09755 0.85 -0.9 2,213,168 - AO356_09755 0.86 -0.5 2,213,168 - AO356_09755 0.86 -0.7 2,213,168 - AO356_09755 0.86 -1.0 2,213,168 - AO356_09755 0.86 -2.4 2,213,251 + -0.0 2,213,251 + -1.9 2,213,252 - -0.1 2,213,252 - +0.3 2,213,266 + -0.5 2,213,492 - AO356_09760 0.84 +0.4 2,213,492 - AO356_09760 0.84 -0.5 2,213,500 + AO356_09760 0.87 -1.4 2,213,500 + AO356_09760 0.87 -1.2 2,213,500 + AO356_09760 0.87 +0.1 2,213,500 + AO356_09760 0.87 -0.4 2,213,501 - AO356_09760 0.88 +1.1 2,213,512 + -2.2 2,213,598 + AO356_09765 0.16 -0.8 2,213,759 + AO356_09765 0.55 -1.8 2,213,759 + AO356_09765 0.55 -1.5 2,213,760 - AO356_09765 0.55 -0.0 2,213,895 + AO356_09765 0.87 -0.4 2,213,909 + -0.0 2,213,909 + -0.1 2,213,909 + -0.1 2,213,909 + +1.1 2,213,909 + +0.3 2,213,909 + -0.9 2,213,909 + +1.9 2,213,910 - +0.0 2,213,910 - +0.1 2,213,910 - -0.5 2,213,917 - +1.3 2,213,968 - -0.9 2,213,982 + -2.2 2,213,982 + -1.9 2,213,983 - -0.5 2,213,983 - +0.3 2,213,983 - -0.1 2,213,984 + -2.0 2,213,984 + +1.0 2,213,984 + -0.7 2,213,984 + -1.0 2,213,984 + -0.1 2,213,984 + -0.4 2,213,984 + +0.9 2,213,984 + +0.4 2,213,984 + -0.6 2,213,984 + -0.1 2,213,984 + -0.2 2,213,984 + -2.0 2,213,984 + +0.4 2,213,984 + -0.7 2,213,985 - +1.0 2,213,985 - -0.0 2,213,985 - +1.1 2,213,985 - +0.1 2,214,038 + -0.0 2,214,038 + -1.8 2,214,038 + -0.0 2,214,039 - +0.4 2,214,039 - -0.5 2,214,039 - +1.1 2,214,039 - +0.8 2,214,044 + -0.1 2,214,044 + +1.0 2,214,045 - -1.3 2,214,045 - +0.8 2,214,045 - +1.5 2,214,104 + -0.9 2,214,104 + -0.3 2,215,665 - -0.6 2,215,758 + +0.6 2,215,759 - +0.9 2,215,806 + -0.7 2,215,806 + +1.1 2,215,806 + -1.9 2,215,806 + -0.1 2,215,806 + +0.6 2,215,806 + +1.1 2,215,807 - +1.6 2,215,807 - -0.4 2,215,807 - +0.4 2,215,807 - +0.3 2,215,807 - +0.7 2,215,807 - +0.2 2,215,807 - -0.8 2,215,809 + -0.7 2,215,809 + +0.4 2,215,809 + -0.8 2,215,809 + +0.2 2,215,809 + +0.8 2,215,809 + +0.9 2,215,810 - -0.6 2,215,810 - +1.3 2,215,810 - +0.4 2,215,810 - +0.3 2,215,842 + +1.2 2,215,842 + +0.8 2,215,843 - -0.5 2,215,843 - +0.5 2,215,860 - -1.2 2,216,203 + AO356_09775 0.28 +1.2 2,216,203 + AO356_09775 0.28 +1.4 2,216,204 - AO356_09775 0.28 +0.1 2,216,251 - AO356_09775 0.32 -0.3 2,216,260 + AO356_09775 0.32 +0.9 2,216,260 + AO356_09775 0.32 +0.7 2,216,260 + AO356_09775 0.32 +0.7 2,216,260 + AO356_09775 0.32 -1.2 2,216,260 + AO356_09775 0.32 +1.3 2,216,260 + AO356_09775 0.32 -1.0 2,216,260 + AO356_09775 0.32 +1.6 2,216,260 + AO356_09775 0.32 -0.2 2,216,260 + AO356_09775 0.32 +0.4 2,216,260 + AO356_09775 0.32 +1.1 2,216,260 + AO356_09775 0.32 -0.4 2,216,260 + AO356_09775 0.32 +0.3 2,216,261 - AO356_09775 0.32 +0.7 2,216,261 - AO356_09775 0.32 -0.8 2,216,261 - AO356_09775 0.32 +1.2 2,216,261 - AO356_09775 0.32 -1.7 2,216,261 - AO356_09775 0.32 -1.6 2,216,261 - AO356_09775 0.32 +0.7 2,216,263 + AO356_09775 0.32 -1.1 2,216,263 + AO356_09775 0.32 +0.6 2,216,263 + AO356_09775 0.32 +0.4 2,216,263 + AO356_09775 0.32 +0.3 2,216,263 + AO356_09775 0.32 +0.8 2,216,264 - AO356_09775 0.33 -0.3 2,216,264 - AO356_09775 0.33 -0.0 2,216,264 - AO356_09775 0.33 +0.7 2,216,264 - AO356_09775 0.33 -0.3 2,216,269 + AO356_09775 0.33 +0.4 2,216,269 + AO356_09775 0.33 +0.5 2,216,269 + AO356_09775 0.33 +0.9 2,216,269 + AO356_09775 0.33 +0.3
Or see this region's nucleotide sequence