Experiment: Chlorite 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_07185 and AO356_07190 are separated by 294 nucleotides AO356_07190 and AO356_07195 are separated by 283 nucleotides
AO356_07185: AO356_07185 - 5-dehydro-4-deoxyglucarate dehydratase, at 1,584,903 to 1,585,814
_07185
AO356_07190: AO356_07190 - hypothetical protein, at 1,586,109 to 1,586,492
_07190
AO356_07195: AO356_07195 - GntR family transcriptional regulator, at 1,586,776 to 1,587,522
_07195
Position (kb)
1586
1587 Strain fitness (log2 ratio)
-2
-1
0
1 at 1585.135 kb on + strand, within AO356_07185 at 1585.135 kb on + strand, within AO356_07185 at 1585.136 kb on - strand, within AO356_07185 at 1585.136 kb on - strand, within AO356_07185 at 1585.136 kb on - strand, within AO356_07185 at 1585.136 kb on - strand, within AO356_07185 at 1585.136 kb on - strand, within AO356_07185 at 1585.184 kb on - strand, within AO356_07185 at 1585.318 kb on + strand, within AO356_07185 at 1585.318 kb on + strand, within AO356_07185 at 1585.319 kb on - strand, within AO356_07185 at 1585.393 kb on + strand, within AO356_07185 at 1585.393 kb on + strand, within AO356_07185 at 1585.394 kb on - strand, within AO356_07185 at 1585.394 kb on - strand, within AO356_07185 at 1585.394 kb on - strand, within AO356_07185 at 1585.474 kb on + strand, within AO356_07185 at 1585.475 kb on - strand, within AO356_07185 at 1585.718 kb on - strand, within AO356_07185 at 1585.718 kb on - strand, within AO356_07185 at 1585.815 kb on + strand at 1585.816 kb on - strand at 1585.898 kb on - strand at 1586.051 kb on + strand at 1586.051 kb on + strand at 1586.051 kb on + strand at 1586.051 kb on + strand at 1586.051 kb on + strand at 1586.051 kb on + strand at 1586.052 kb on - strand at 1586.052 kb on - strand at 1586.052 kb on - strand at 1586.052 kb on - strand at 1586.052 kb on - strand at 1586.052 kb on - strand at 1586.052 kb on - strand at 1586.052 kb on - strand at 1586.052 kb on - strand at 1586.055 kb on + strand at 1586.055 kb on + strand at 1586.056 kb on - strand at 1586.071 kb on + strand at 1586.071 kb on + strand at 1586.071 kb on + strand at 1586.071 kb on + strand at 1586.071 kb on + strand at 1586.072 kb on - strand at 1586.394 kb on + strand, within AO356_07190 at 1586.394 kb on + strand, within AO356_07190 at 1586.394 kb on + strand, within AO356_07190 at 1586.395 kb on - strand, within AO356_07190 at 1586.445 kb on + strand, within AO356_07190 at 1586.445 kb on + strand, within AO356_07190 at 1586.454 kb on + strand at 1586.455 kb on - strand at 1586.455 kb on - strand at 1586.455 kb on - strand at 1586.490 kb on + strand at 1586.620 kb on - strand at 1586.637 kb on + strand at 1586.637 kb on + strand at 1586.637 kb on + strand at 1586.637 kb on + strand at 1586.637 kb on + strand at 1586.637 kb on + strand at 1586.637 kb on + strand at 1586.637 kb on + strand at 1586.638 kb on - strand at 1586.638 kb on - strand at 1586.638 kb on - strand at 1586.638 kb on - strand at 1586.638 kb on - strand at 1586.641 kb on + strand at 1586.641 kb on + strand at 1586.641 kb on + strand at 1586.641 kb on + strand at 1586.641 kb on + strand at 1586.642 kb on - strand at 1586.642 kb on - strand at 1586.643 kb on + strand at 1586.643 kb on + strand at 1586.643 kb on + strand at 1586.643 kb on + strand at 1586.643 kb on + strand at 1586.643 kb on + strand at 1586.643 kb on + strand at 1586.644 kb on - strand at 1586.644 kb on - strand at 1586.644 kb on - strand at 1586.644 kb on - strand at 1586.705 kb on + strand at 1586.891 kb on + strand, within AO356_07195 at 1586.891 kb on + strand, within AO356_07195 at 1586.927 kb on + strand, within AO356_07195 at 1586.927 kb on + strand, within AO356_07195 at 1586.927 kb on + strand, within AO356_07195 at 1586.927 kb on + strand, within AO356_07195 at 1586.927 kb on + strand, within AO356_07195 at 1586.927 kb on + strand, within AO356_07195 at 1586.927 kb on + strand, within AO356_07195 at 1586.927 kb on + strand, within AO356_07195 at 1586.927 kb on + strand, within AO356_07195 at 1586.927 kb on + strand, within AO356_07195 at 1586.927 kb on + strand, within AO356_07195 at 1586.927 kb on + strand, within AO356_07195 at 1586.928 kb on - strand, within AO356_07195 at 1586.928 kb on - strand, within AO356_07195 at 1586.928 kb on - strand, within AO356_07195 at 1586.928 kb on - strand, within AO356_07195 at 1587.020 kb on + strand, within AO356_07195 at 1587.409 kb on - strand, within AO356_07195
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.08 mM remove 1,585,135 + AO356_07185 0.25 -1.8 1,585,135 + AO356_07185 0.25 -0.2 1,585,136 - AO356_07185 0.26 -0.0 1,585,136 - AO356_07185 0.26 +0.5 1,585,136 - AO356_07185 0.26 -0.2 1,585,136 - AO356_07185 0.26 +0.5 1,585,136 - AO356_07185 0.26 -0.7 1,585,184 - AO356_07185 0.31 -1.5 1,585,318 + AO356_07185 0.46 +0.7 1,585,318 + AO356_07185 0.46 +0.6 1,585,319 - AO356_07185 0.46 -0.8 1,585,393 + AO356_07185 0.54 -0.2 1,585,393 + AO356_07185 0.54 -1.6 1,585,394 - AO356_07185 0.54 -1.1 1,585,394 - AO356_07185 0.54 -0.3 1,585,394 - AO356_07185 0.54 +0.6 1,585,474 + AO356_07185 0.63 -0.7 1,585,475 - AO356_07185 0.63 +1.2 1,585,718 - AO356_07185 0.89 +0.0 1,585,718 - AO356_07185 0.89 -0.4 1,585,815 + -0.6 1,585,816 - -1.0 1,585,898 - -0.4 1,586,051 + +0.2 1,586,051 + -0.9 1,586,051 + +1.3 1,586,051 + +1.6 1,586,051 + +1.2 1,586,051 + -0.4 1,586,052 - -0.1 1,586,052 - -0.5 1,586,052 - -0.5 1,586,052 - -1.2 1,586,052 - -0.8 1,586,052 - -0.0 1,586,052 - +0.2 1,586,052 - -0.0 1,586,052 - +0.1 1,586,055 + +1.1 1,586,055 + -0.1 1,586,056 - +1.4 1,586,071 + +0.3 1,586,071 + +1.6 1,586,071 + +0.2 1,586,071 + -0.0 1,586,071 + +0.4 1,586,072 - +0.3 1,586,394 + AO356_07190 0.74 +0.3 1,586,394 + AO356_07190 0.74 -1.5 1,586,394 + AO356_07190 0.74 -1.8 1,586,395 - AO356_07190 0.74 +0.2 1,586,445 + AO356_07190 0.88 -1.0 1,586,445 + AO356_07190 0.88 -0.3 1,586,454 + +1.3 1,586,455 - +1.6 1,586,455 - -0.0 1,586,455 - +0.0 1,586,490 + -0.4 1,586,620 - +0.7 1,586,637 + +0.3 1,586,637 + -0.2 1,586,637 + -0.7 1,586,637 + +0.2 1,586,637 + -1.0 1,586,637 + +0.0 1,586,637 + +0.8 1,586,637 + +0.1 1,586,638 - +1.0 1,586,638 - -0.8 1,586,638 - -0.8 1,586,638 - -0.1 1,586,638 - +0.2 1,586,641 + +0.3 1,586,641 + +0.9 1,586,641 + +1.3 1,586,641 + -0.9 1,586,641 + +0.1 1,586,642 - +0.2 1,586,642 - +0.7 1,586,643 + +0.4 1,586,643 + +0.1 1,586,643 + -0.0 1,586,643 + +0.0 1,586,643 + +0.1 1,586,643 + +0.2 1,586,643 + -1.3 1,586,644 - +0.3 1,586,644 - -0.5 1,586,644 - +1.0 1,586,644 - -0.8 1,586,705 + +0.5 1,586,891 + AO356_07195 0.15 +0.3 1,586,891 + AO356_07195 0.15 -0.9 1,586,927 + AO356_07195 0.20 +1.7 1,586,927 + AO356_07195 0.20 -0.1 1,586,927 + AO356_07195 0.20 -0.5 1,586,927 + AO356_07195 0.20 +0.9 1,586,927 + AO356_07195 0.20 +0.1 1,586,927 + AO356_07195 0.20 -0.5 1,586,927 + AO356_07195 0.20 -0.8 1,586,927 + AO356_07195 0.20 +1.0 1,586,927 + AO356_07195 0.20 -0.4 1,586,927 + AO356_07195 0.20 +1.5 1,586,927 + AO356_07195 0.20 +0.3 1,586,927 + AO356_07195 0.20 +0.1 1,586,928 - AO356_07195 0.20 -0.7 1,586,928 - AO356_07195 0.20 +1.5 1,586,928 - AO356_07195 0.20 -0.2 1,586,928 - AO356_07195 0.20 -0.7 1,587,020 + AO356_07195 0.33 -0.2 1,587,409 - AO356_07195 0.85 +0.4
Or see this region's nucleotide sequence