Experiment: Chlorite 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_06800 and AO356_06805 are separated by 400 nucleotides AO356_06805 and AO356_06810 are separated by 92 nucleotides AO356_06810 and AO356_06815 are separated by 195 nucleotides
AO356_06800: AO356_06800 - AraC family transcriptional regulator, at 1,502,430 to 1,503,230
_06800
AO356_06805: AO356_06805 - hypothetical protein, at 1,503,631 to 1,505,139
_06805
AO356_06810: AO356_06810 - hypothetical protein, at 1,505,232 to 1,505,777
_06810
AO356_06815: AO356_06815 - isomerase, at 1,505,973 to 1,506,722
_06815
Position (kb)
1503
1504
1505
1506 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1502.633 kb on - strand, within AO356_06800 at 1502.633 kb on - strand, within AO356_06800 at 1502.862 kb on - strand, within AO356_06800 at 1502.902 kb on + strand, within AO356_06800 at 1502.902 kb on + strand, within AO356_06800 at 1502.902 kb on + strand, within AO356_06800 at 1502.902 kb on + strand, within AO356_06800 at 1502.903 kb on - strand, within AO356_06800 at 1502.903 kb on - strand, within AO356_06800 at 1502.903 kb on - strand, within AO356_06800 at 1502.903 kb on - strand, within AO356_06800 at 1502.903 kb on - strand, within AO356_06800 at 1503.165 kb on - strand at 1503.195 kb on - strand at 1503.269 kb on - strand at 1503.278 kb on + strand at 1503.279 kb on - strand at 1503.297 kb on - strand at 1503.316 kb on + strand at 1503.316 kb on + strand at 1503.316 kb on + strand at 1503.352 kb on + strand at 1503.352 kb on + strand at 1503.354 kb on + strand at 1503.354 kb on + strand at 1503.355 kb on - strand at 1503.355 kb on - strand at 1503.355 kb on - strand at 1503.398 kb on + strand at 1503.399 kb on - strand at 1503.399 kb on - strand at 1503.399 kb on - strand at 1503.432 kb on - strand at 1503.433 kb on + strand at 1503.434 kb on - strand at 1503.518 kb on - strand at 1503.660 kb on + strand at 1503.660 kb on + strand at 1503.661 kb on - strand at 1503.709 kb on + strand at 1503.709 kb on + strand at 1503.709 kb on + strand at 1503.709 kb on + strand at 1503.709 kb on + strand at 1503.709 kb on + strand at 1503.710 kb on - strand at 1503.710 kb on - strand at 1503.710 kb on - strand at 1503.710 kb on - strand at 1503.710 kb on - strand at 1503.710 kb on - strand at 1503.712 kb on + strand at 1503.713 kb on - strand at 1504.060 kb on + strand, within AO356_06805 at 1504.060 kb on + strand, within AO356_06805 at 1504.060 kb on + strand, within AO356_06805 at 1504.060 kb on + strand, within AO356_06805 at 1504.060 kb on + strand, within AO356_06805 at 1504.060 kb on + strand, within AO356_06805 at 1504.060 kb on + strand, within AO356_06805 at 1504.060 kb on + strand, within AO356_06805 at 1504.060 kb on + strand, within AO356_06805 at 1504.061 kb on - strand, within AO356_06805 at 1504.061 kb on - strand, within AO356_06805 at 1504.061 kb on - strand, within AO356_06805 at 1504.061 kb on - strand, within AO356_06805 at 1504.061 kb on - strand, within AO356_06805 at 1504.072 kb on + strand, within AO356_06805 at 1504.072 kb on + strand, within AO356_06805 at 1504.072 kb on + strand, within AO356_06805 at 1504.073 kb on - strand, within AO356_06805 at 1504.073 kb on - strand, within AO356_06805 at 1504.145 kb on - strand, within AO356_06805 at 1504.266 kb on - strand, within AO356_06805 at 1504.276 kb on + strand, within AO356_06805 at 1504.276 kb on + strand, within AO356_06805 at 1504.301 kb on - strand, within AO356_06805 at 1504.397 kb on + strand, within AO356_06805 at 1504.397 kb on + strand, within AO356_06805 at 1504.398 kb on - strand, within AO356_06805 at 1504.398 kb on - strand, within AO356_06805 at 1504.418 kb on - strand, within AO356_06805 at 1504.418 kb on - strand, within AO356_06805 at 1504.483 kb on + strand, within AO356_06805 at 1504.621 kb on + strand, within AO356_06805 at 1504.623 kb on + strand, within AO356_06805 at 1504.624 kb on - strand, within AO356_06805 at 1504.624 kb on - strand, within AO356_06805 at 1504.645 kb on + strand, within AO356_06805 at 1504.645 kb on + strand, within AO356_06805 at 1504.646 kb on - strand, within AO356_06805 at 1504.646 kb on - strand, within AO356_06805 at 1504.762 kb on - strand, within AO356_06805 at 1504.845 kb on + strand, within AO356_06805 at 1504.845 kb on + strand, within AO356_06805 at 1504.845 kb on + strand, within AO356_06805 at 1504.845 kb on + strand, within AO356_06805 at 1504.845 kb on + strand, within AO356_06805 at 1504.923 kb on + strand, within AO356_06805 at 1504.923 kb on + strand, within AO356_06805 at 1504.923 kb on + strand, within AO356_06805 at 1504.924 kb on - strand, within AO356_06805 at 1504.924 kb on - strand, within AO356_06805 at 1505.026 kb on + strand at 1505.027 kb on - strand at 1505.027 kb on - strand at 1505.027 kb on - strand at 1505.027 kb on - strand at 1505.027 kb on - strand at 1505.030 kb on + strand at 1505.030 kb on + strand at 1505.048 kb on - strand at 1505.048 kb on - strand at 1505.169 kb on - strand at 1505.270 kb on - strand at 1505.272 kb on + strand at 1505.273 kb on - strand at 1505.830 kb on + strand at 1505.831 kb on - strand at 1505.831 kb on - strand at 1505.834 kb on + strand at 1505.834 kb on + strand at 1505.834 kb on + strand at 1505.834 kb on + strand at 1505.835 kb on - strand at 1505.835 kb on - strand at 1505.835 kb on - strand at 1505.835 kb on - strand at 1505.835 kb on - strand at 1505.835 kb on - strand at 1505.835 kb on - strand at 1505.835 kb on - strand at 1505.840 kb on - strand at 1506.015 kb on - strand at 1506.098 kb on + strand, within AO356_06815
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.08 mM remove 1,502,633 - AO356_06800 0.25 -2.3 1,502,633 - AO356_06800 0.25 -0.2 1,502,862 - AO356_06800 0.54 +0.2 1,502,902 + AO356_06800 0.59 +0.3 1,502,902 + AO356_06800 0.59 +0.7 1,502,902 + AO356_06800 0.59 +0.6 1,502,902 + AO356_06800 0.59 -0.4 1,502,903 - AO356_06800 0.59 +0.6 1,502,903 - AO356_06800 0.59 -1.8 1,502,903 - AO356_06800 0.59 +0.1 1,502,903 - AO356_06800 0.59 -0.6 1,502,903 - AO356_06800 0.59 -1.4 1,503,165 - -0.4 1,503,195 - +0.9 1,503,269 - +0.3 1,503,278 + +0.9 1,503,279 - -1.3 1,503,297 - -2.6 1,503,316 + +0.2 1,503,316 + +0.7 1,503,316 + +1.3 1,503,352 + -0.4 1,503,352 + +1.0 1,503,354 + +2.7 1,503,354 + +0.1 1,503,355 - -1.4 1,503,355 - -0.9 1,503,355 - -0.4 1,503,398 + -0.1 1,503,399 - -0.4 1,503,399 - -0.8 1,503,399 - +0.2 1,503,432 - -0.2 1,503,433 + +0.2 1,503,434 - -0.6 1,503,518 - -2.8 1,503,660 + -0.1 1,503,660 + -0.2 1,503,661 - -1.8 1,503,709 + +0.6 1,503,709 + +0.3 1,503,709 + -0.7 1,503,709 + +0.1 1,503,709 + -1.6 1,503,709 + -0.5 1,503,710 - -1.0 1,503,710 - -1.6 1,503,710 - -0.3 1,503,710 - -0.7 1,503,710 - -1.4 1,503,710 - +1.2 1,503,712 + +1.1 1,503,713 - +0.1 1,504,060 + AO356_06805 0.28 +0.0 1,504,060 + AO356_06805 0.28 +0.5 1,504,060 + AO356_06805 0.28 +0.1 1,504,060 + AO356_06805 0.28 -0.2 1,504,060 + AO356_06805 0.28 -0.5 1,504,060 + AO356_06805 0.28 +0.0 1,504,060 + AO356_06805 0.28 -2.4 1,504,060 + AO356_06805 0.28 +0.7 1,504,060 + AO356_06805 0.28 -0.3 1,504,061 - AO356_06805 0.28 -3.1 1,504,061 - AO356_06805 0.28 -0.9 1,504,061 - AO356_06805 0.28 -0.4 1,504,061 - AO356_06805 0.28 +0.0 1,504,061 - AO356_06805 0.28 -0.7 1,504,072 + AO356_06805 0.29 -0.0 1,504,072 + AO356_06805 0.29 -0.3 1,504,072 + AO356_06805 0.29 -1.1 1,504,073 - AO356_06805 0.29 -0.2 1,504,073 - AO356_06805 0.29 -0.2 1,504,145 - AO356_06805 0.34 -0.1 1,504,266 - AO356_06805 0.42 -0.8 1,504,276 + AO356_06805 0.43 -0.7 1,504,276 + AO356_06805 0.43 +0.6 1,504,301 - AO356_06805 0.44 -0.5 1,504,397 + AO356_06805 0.51 -1.1 1,504,397 + AO356_06805 0.51 -0.0 1,504,398 - AO356_06805 0.51 +0.1 1,504,398 - AO356_06805 0.51 +0.2 1,504,418 - AO356_06805 0.52 -1.2 1,504,418 - AO356_06805 0.52 -0.9 1,504,483 + AO356_06805 0.56 -0.3 1,504,621 + AO356_06805 0.66 -2.0 1,504,623 + AO356_06805 0.66 -0.4 1,504,624 - AO356_06805 0.66 -1.3 1,504,624 - AO356_06805 0.66 -0.2 1,504,645 + AO356_06805 0.67 -0.6 1,504,645 + AO356_06805 0.67 +0.1 1,504,646 - AO356_06805 0.67 -0.8 1,504,646 - AO356_06805 0.67 +1.0 1,504,762 - AO356_06805 0.75 -0.7 1,504,845 + AO356_06805 0.80 -0.7 1,504,845 + AO356_06805 0.80 +0.6 1,504,845 + AO356_06805 0.80 -0.7 1,504,845 + AO356_06805 0.80 +0.8 1,504,845 + AO356_06805 0.80 -0.8 1,504,923 + AO356_06805 0.86 -0.5 1,504,923 + AO356_06805 0.86 +1.0 1,504,923 + AO356_06805 0.86 -1.4 1,504,924 - AO356_06805 0.86 +0.6 1,504,924 - AO356_06805 0.86 -0.4 1,505,026 + +0.4 1,505,027 - +0.6 1,505,027 - -0.4 1,505,027 - +0.2 1,505,027 - -0.3 1,505,027 - -0.5 1,505,030 + -0.6 1,505,030 + +1.0 1,505,048 - -1.9 1,505,048 - -0.6 1,505,169 - +0.5 1,505,270 - -0.0 1,505,272 + -0.9 1,505,273 - +0.6 1,505,830 + -0.9 1,505,831 - +0.5 1,505,831 - -0.0 1,505,834 + -0.2 1,505,834 + +0.4 1,505,834 + -0.7 1,505,834 + -0.1 1,505,835 - -0.3 1,505,835 - -1.0 1,505,835 - -1.1 1,505,835 - +0.9 1,505,835 - -2.0 1,505,835 - -0.4 1,505,835 - +0.5 1,505,835 - -0.2 1,505,840 - +0.2 1,506,015 - +0.9 1,506,098 + AO356_06815 0.17 +0.2
Or see this region's nucleotide sequence