Experiment: Chlorite 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_05745 and AO356_05750 overlap by 14 nucleotides AO356_05750 and AO356_05755 are separated by 130 nucleotides AO356_05755 and AO356_05760 overlap by 4 nucleotides AO356_05760 and AO356_05765 are separated by 67 nucleotides
AO356_05745: AO356_05745 - hydroxyacid dehydrogenase, at 1,278,631 to 1,279,869
_05745
AO356_05750: AO356_05750 - phage tail protein, at 1,279,856 to 1,281,430
_05750
AO356_05755: AO356_05755 - ArsR family transcriptional regulator, at 1,281,561 to 1,281,857
_05755
AO356_05760: AO356_05760 - phage tail protein, at 1,281,854 to 1,282,201
_05760
AO356_05765: AO356_05765 - phage tail protein, at 1,282,269 to 1,283,765
_05765
Position (kb)
1279
1280
1281
1282 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1278.858 kb on - strand, within AO356_05745 at 1279.307 kb on + strand, within AO356_05745 at 1279.349 kb on + strand, within AO356_05745 at 1279.349 kb on + strand, within AO356_05745 at 1279.349 kb on + strand, within AO356_05745 at 1279.350 kb on - strand, within AO356_05745 at 1279.350 kb on - strand, within AO356_05745 at 1279.896 kb on + strand at 1280.228 kb on - strand, within AO356_05750 at 1280.996 kb on + strand, within AO356_05750 at 1281.247 kb on + strand, within AO356_05750 at 1281.248 kb on - strand, within AO356_05750 at 1281.289 kb on + strand at 1281.290 kb on - strand at 1281.410 kb on + strand at 1281.688 kb on + strand, within AO356_05755 at 1281.688 kb on + strand, within AO356_05755 at 1281.743 kb on - strand, within AO356_05755 at 1281.743 kb on - strand, within AO356_05755 at 1281.991 kb on + strand, within AO356_05760 at 1282.080 kb on + strand, within AO356_05760 at 1282.081 kb on - strand, within AO356_05760 at 1282.173 kb on + strand at 1282.173 kb on + strand at 1282.173 kb on + strand at 1282.174 kb on - strand at 1282.285 kb on + strand at 1282.285 kb on + strand at 1282.285 kb on + strand at 1282.286 kb on - strand at 1282.336 kb on + strand at 1282.336 kb on + strand at 1282.337 kb on - strand at 1282.337 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.08 mM remove 1,278,858 - AO356_05745 0.18 +0.2 1,279,307 + AO356_05745 0.55 +0.6 1,279,349 + AO356_05745 0.58 +0.7 1,279,349 + AO356_05745 0.58 -0.0 1,279,349 + AO356_05745 0.58 +1.4 1,279,350 - AO356_05745 0.58 +0.3 1,279,350 - AO356_05745 0.58 -0.2 1,279,896 + -3.0 1,280,228 - AO356_05750 0.24 -0.2 1,280,996 + AO356_05750 0.72 -1.1 1,281,247 + AO356_05750 0.88 -0.6 1,281,248 - AO356_05750 0.88 -0.6 1,281,289 + +0.3 1,281,290 - -0.1 1,281,410 + +0.7 1,281,688 + AO356_05755 0.43 +0.5 1,281,688 + AO356_05755 0.43 -1.3 1,281,743 - AO356_05755 0.61 -0.3 1,281,743 - AO356_05755 0.61 +0.0 1,281,991 + AO356_05760 0.39 -0.5 1,282,080 + AO356_05760 0.65 +1.2 1,282,081 - AO356_05760 0.65 -0.2 1,282,173 + -0.3 1,282,173 + -0.9 1,282,173 + -1.2 1,282,174 - +0.8 1,282,285 + -0.4 1,282,285 + -1.0 1,282,285 + -0.2 1,282,286 - -0.9 1,282,336 + -0.4 1,282,336 + -0.2 1,282,337 - +0.7 1,282,337 - -0.1
Or see this region's nucleotide sequence