Experiment: Chlorite 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_04615 and AO356_04620 are separated by 55 nucleotides AO356_04620 and AO356_04625 are separated by 1 nucleotides
AO356_04615: AO356_04615 - tricarboxylic transporter, at 1,039,126 to 1,040,118
_04615
AO356_04620: AO356_04620 - hypothetical protein, at 1,040,174 to 1,040,635
_04620
AO356_04625: AO356_04625 - tripartite tricarboxylate transporter TctA, at 1,040,637 to 1,042,151
_04625
Position (kb)
1040
1041 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1039.333 kb on + strand, within AO356_04615 at 1039.333 kb on + strand, within AO356_04615 at 1039.333 kb on + strand, within AO356_04615 at 1039.333 kb on + strand, within AO356_04615 at 1039.333 kb on + strand, within AO356_04615 at 1039.333 kb on + strand, within AO356_04615 at 1039.333 kb on + strand, within AO356_04615 at 1039.334 kb on - strand, within AO356_04615 at 1039.334 kb on - strand, within AO356_04615 at 1039.334 kb on - strand, within AO356_04615 at 1039.334 kb on - strand, within AO356_04615 at 1039.334 kb on - strand, within AO356_04615 at 1039.334 kb on - strand, within AO356_04615 at 1039.363 kb on + strand, within AO356_04615 at 1039.363 kb on + strand, within AO356_04615 at 1039.363 kb on + strand, within AO356_04615 at 1039.363 kb on + strand, within AO356_04615 at 1039.363 kb on + strand, within AO356_04615 at 1039.363 kb on + strand, within AO356_04615 at 1039.364 kb on - strand, within AO356_04615 at 1039.364 kb on - strand, within AO356_04615 at 1039.364 kb on - strand, within AO356_04615 at 1039.364 kb on - strand, within AO356_04615 at 1039.364 kb on - strand, within AO356_04615 at 1039.364 kb on - strand, within AO356_04615 at 1039.507 kb on + strand, within AO356_04615 at 1039.507 kb on + strand, within AO356_04615 at 1039.507 kb on + strand, within AO356_04615 at 1039.507 kb on + strand, within AO356_04615 at 1039.507 kb on + strand, within AO356_04615 at 1039.508 kb on - strand, within AO356_04615 at 1039.508 kb on - strand, within AO356_04615 at 1039.540 kb on + strand, within AO356_04615 at 1039.541 kb on - strand, within AO356_04615 at 1039.687 kb on + strand, within AO356_04615 at 1039.687 kb on + strand, within AO356_04615 at 1039.688 kb on - strand, within AO356_04615 at 1039.692 kb on - strand, within AO356_04615 at 1039.879 kb on + strand, within AO356_04615 at 1039.879 kb on + strand, within AO356_04615 at 1039.879 kb on + strand, within AO356_04615 at 1039.880 kb on - strand, within AO356_04615 at 1039.880 kb on - strand, within AO356_04615 at 1039.880 kb on - strand, within AO356_04615 at 1039.880 kb on - strand, within AO356_04615 at 1039.913 kb on - strand, within AO356_04615 at 1039.942 kb on + strand, within AO356_04615 at 1039.942 kb on + strand, within AO356_04615 at 1039.942 kb on + strand, within AO356_04615 at 1039.942 kb on + strand, within AO356_04615 at 1039.943 kb on - strand, within AO356_04615 at 1039.943 kb on - strand, within AO356_04615 at 1040.056 kb on + strand at 1040.056 kb on + strand at 1040.056 kb on + strand at 1040.056 kb on + strand at 1040.057 kb on - strand at 1040.057 kb on - strand at 1040.057 kb on - strand at 1040.057 kb on - strand at 1040.057 kb on - strand at 1040.080 kb on + strand at 1040.080 kb on + strand at 1040.080 kb on + strand at 1040.080 kb on + strand at 1040.081 kb on - strand at 1040.081 kb on - strand at 1040.081 kb on - strand at 1040.081 kb on - strand at 1040.081 kb on - strand at 1040.169 kb on + strand at 1040.169 kb on + strand at 1040.169 kb on + strand at 1040.169 kb on + strand at 1040.170 kb on - strand at 1040.170 kb on - strand at 1040.170 kb on - strand at 1040.170 kb on - strand at 1040.191 kb on + strand at 1040.191 kb on + strand at 1040.333 kb on + strand, within AO356_04620 at 1040.333 kb on + strand, within AO356_04620 at 1040.333 kb on + strand, within AO356_04620 at 1040.333 kb on + strand, within AO356_04620 at 1040.333 kb on + strand, within AO356_04620 at 1040.334 kb on - strand, within AO356_04620 at 1040.334 kb on - strand, within AO356_04620 at 1040.334 kb on - strand, within AO356_04620 at 1040.334 kb on - strand, within AO356_04620 at 1040.334 kb on - strand, within AO356_04620 at 1040.334 kb on - strand, within AO356_04620 at 1040.437 kb on - strand, within AO356_04620 at 1040.437 kb on - strand, within AO356_04620 at 1040.510 kb on + strand, within AO356_04620 at 1040.568 kb on - strand, within AO356_04620 at 1040.568 kb on - strand, within AO356_04620 at 1040.568 kb on - strand, within AO356_04620 at 1040.568 kb on - strand, within AO356_04620 at 1040.568 kb on - strand, within AO356_04620 at 1040.688 kb on + strand at 1040.688 kb on + strand at 1040.770 kb on + strand at 1040.771 kb on - strand at 1040.844 kb on + strand, within AO356_04625 at 1040.845 kb on - strand, within AO356_04625 at 1040.845 kb on - strand, within AO356_04625 at 1041.081 kb on + strand, within AO356_04625 at 1041.081 kb on + strand, within AO356_04625 at 1041.082 kb on - strand, within AO356_04625 at 1041.082 kb on - strand, within AO356_04625 at 1041.082 kb on - strand, within AO356_04625 at 1041.213 kb on + strand, within AO356_04625 at 1041.214 kb on - strand, within AO356_04625 at 1041.304 kb on + strand, within AO356_04625 at 1041.304 kb on + strand, within AO356_04625 at 1041.304 kb on + strand, within AO356_04625 at 1041.304 kb on + strand, within AO356_04625 at 1041.304 kb on + strand, within AO356_04625 at 1041.304 kb on + strand, within AO356_04625 at 1041.477 kb on + strand, within AO356_04625 at 1041.477 kb on + strand, within AO356_04625 at 1041.477 kb on + strand, within AO356_04625 at 1041.477 kb on + strand, within AO356_04625 at 1041.477 kb on + strand, within AO356_04625 at 1041.478 kb on - strand, within AO356_04625 at 1041.478 kb on - strand, within AO356_04625 at 1041.478 kb on - strand, within AO356_04625 at 1041.478 kb on - strand, within AO356_04625 at 1041.478 kb on - strand, within AO356_04625 at 1041.478 kb on - strand, within AO356_04625
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.08 mM remove 1,039,333 + AO356_04615 0.21 -1.8 1,039,333 + AO356_04615 0.21 -1.0 1,039,333 + AO356_04615 0.21 +0.3 1,039,333 + AO356_04615 0.21 -2.1 1,039,333 + AO356_04615 0.21 -0.4 1,039,333 + AO356_04615 0.21 -0.1 1,039,333 + AO356_04615 0.21 -0.4 1,039,334 - AO356_04615 0.21 -1.8 1,039,334 - AO356_04615 0.21 +0.7 1,039,334 - AO356_04615 0.21 -1.1 1,039,334 - AO356_04615 0.21 +1.0 1,039,334 - AO356_04615 0.21 +0.9 1,039,334 - AO356_04615 0.21 -1.7 1,039,363 + AO356_04615 0.24 -0.6 1,039,363 + AO356_04615 0.24 -0.8 1,039,363 + AO356_04615 0.24 -0.4 1,039,363 + AO356_04615 0.24 -0.7 1,039,363 + AO356_04615 0.24 +2.0 1,039,363 + AO356_04615 0.24 -1.8 1,039,364 - AO356_04615 0.24 +1.2 1,039,364 - AO356_04615 0.24 -0.3 1,039,364 - AO356_04615 0.24 -0.8 1,039,364 - AO356_04615 0.24 +0.2 1,039,364 - AO356_04615 0.24 -0.6 1,039,364 - AO356_04615 0.24 -3.1 1,039,507 + AO356_04615 0.38 +0.5 1,039,507 + AO356_04615 0.38 +1.5 1,039,507 + AO356_04615 0.38 +0.7 1,039,507 + AO356_04615 0.38 -2.1 1,039,507 + AO356_04615 0.38 +0.6 1,039,508 - AO356_04615 0.38 -0.2 1,039,508 - AO356_04615 0.38 -0.5 1,039,540 + AO356_04615 0.42 -0.2 1,039,541 - AO356_04615 0.42 +0.4 1,039,687 + AO356_04615 0.56 +0.2 1,039,687 + AO356_04615 0.56 -0.9 1,039,688 - AO356_04615 0.57 -0.1 1,039,692 - AO356_04615 0.57 +0.4 1,039,879 + AO356_04615 0.76 +0.3 1,039,879 + AO356_04615 0.76 -1.3 1,039,879 + AO356_04615 0.76 -0.3 1,039,880 - AO356_04615 0.76 -1.3 1,039,880 - AO356_04615 0.76 +0.3 1,039,880 - AO356_04615 0.76 +0.4 1,039,880 - AO356_04615 0.76 -1.8 1,039,913 - AO356_04615 0.79 +0.7 1,039,942 + AO356_04615 0.82 -0.0 1,039,942 + AO356_04615 0.82 -1.2 1,039,942 + AO356_04615 0.82 -1.9 1,039,942 + AO356_04615 0.82 +0.0 1,039,943 - AO356_04615 0.82 -0.2 1,039,943 - AO356_04615 0.82 +1.1 1,040,056 + -0.9 1,040,056 + +0.0 1,040,056 + +0.3 1,040,056 + -0.0 1,040,057 - -1.0 1,040,057 - -1.0 1,040,057 - -0.1 1,040,057 - -1.1 1,040,057 - -1.4 1,040,080 + +0.9 1,040,080 + +1.1 1,040,080 + +0.2 1,040,080 + -1.2 1,040,081 - +1.5 1,040,081 - -0.9 1,040,081 - -1.4 1,040,081 - -0.9 1,040,081 - +0.1 1,040,169 + +0.5 1,040,169 + +0.7 1,040,169 + +1.0 1,040,169 + -1.0 1,040,170 - -1.0 1,040,170 - -0.6 1,040,170 - -0.5 1,040,170 - -0.1 1,040,191 + -2.0 1,040,191 + -0.4 1,040,333 + AO356_04620 0.34 +0.5 1,040,333 + AO356_04620 0.34 -0.4 1,040,333 + AO356_04620 0.34 -0.3 1,040,333 + AO356_04620 0.34 -0.3 1,040,333 + AO356_04620 0.34 -0.8 1,040,334 - AO356_04620 0.35 +0.6 1,040,334 - AO356_04620 0.35 +0.4 1,040,334 - AO356_04620 0.35 -0.9 1,040,334 - AO356_04620 0.35 -0.3 1,040,334 - AO356_04620 0.35 -1.0 1,040,334 - AO356_04620 0.35 +0.3 1,040,437 - AO356_04620 0.57 +0.3 1,040,437 - AO356_04620 0.57 -0.2 1,040,510 + AO356_04620 0.73 -1.2 1,040,568 - AO356_04620 0.85 -0.1 1,040,568 - AO356_04620 0.85 -0.0 1,040,568 - AO356_04620 0.85 +0.1 1,040,568 - AO356_04620 0.85 +0.7 1,040,568 - AO356_04620 0.85 +0.1 1,040,688 + +0.3 1,040,688 + +0.2 1,040,770 + -0.4 1,040,771 - -0.8 1,040,844 + AO356_04625 0.14 +0.6 1,040,845 - AO356_04625 0.14 -0.2 1,040,845 - AO356_04625 0.14 +0.7 1,041,081 + AO356_04625 0.29 +0.1 1,041,081 + AO356_04625 0.29 +0.8 1,041,082 - AO356_04625 0.29 +0.4 1,041,082 - AO356_04625 0.29 +0.0 1,041,082 - AO356_04625 0.29 +0.0 1,041,213 + AO356_04625 0.38 +1.1 1,041,214 - AO356_04625 0.38 -0.0 1,041,304 + AO356_04625 0.44 -0.1 1,041,304 + AO356_04625 0.44 +0.1 1,041,304 + AO356_04625 0.44 +0.5 1,041,304 + AO356_04625 0.44 -0.8 1,041,304 + AO356_04625 0.44 +1.2 1,041,304 + AO356_04625 0.44 -0.7 1,041,477 + AO356_04625 0.55 -0.2 1,041,477 + AO356_04625 0.55 +0.3 1,041,477 + AO356_04625 0.55 +1.1 1,041,477 + AO356_04625 0.55 -0.1 1,041,477 + AO356_04625 0.55 +0.1 1,041,478 - AO356_04625 0.56 -0.1 1,041,478 - AO356_04625 0.56 +0.2 1,041,478 - AO356_04625 0.56 +0.3 1,041,478 - AO356_04625 0.56 -0.9 1,041,478 - AO356_04625 0.56 +1.2 1,041,478 - AO356_04625 0.56 +0.0
Or see this region's nucleotide sequence